BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0049.0031.p         (251 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

PA3081 Non COG                                                        108   9e-24
PA3922 Non COG                                                        105   1e-22
PA0383 Non COG                                                         90   6e-18
PA3421 Non COG                                                         83   5e-16

>PA3081 Non COG
          Length = 455

 Score =  108 bits (271), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 81/244 (33%), Positives = 125/244 (51%), Gaps = 16/244 (6%)

Query: 4   VVMKRTILGLSI---LAVGATLA--HAASVQDLGTTLTPLGGDKA--AGQGVPEWKAENV 56
           ++ K  ++G S+   L  G  LA   A     L ++LTPLG +KA  A   +P W     
Sbjct: 1   MLNKHLLIGASLALALGSGGALAGVSAGEAAQLKSSLTPLGAEKAGNAAGSIPAWTGGIT 60

Query: 57  ELP-GWSYGKLRKDYFKYKDEKPTEVIDASNVDKYADRLTPGQVALIKQV-KGYKMDIYP 114
           + P G+  G+   D F    +KP   ID +N+++Y + LTPGQ+AL K     ++M +YP
Sbjct: 61  QAPAGYKPGQHHPDPFA--ADKPLFTIDKANLEQYREHLTPGQLALFKTYPDSFRMPVYP 118

Query: 115 THRYCAAPDFVVENTKKNVADGKIGADGWSLAEANVPGIPFPLPKTGLEVMYNSKMRYRG 174
           + R  +AP ++ +NT  N    ++   G   A+A   G+PFP+PK+G+E ++N   RYRG
Sbjct: 119 SRRSGSAPQWLYDNTFANATSARLLDGGNGFADA-YGGVPFPIPKSGVEALWNHVARYRG 177

Query: 175 LGVDFPNTITAVSPRKGSNEWIKASQQLTLFYPSNVKGSTKLSTLGGVEFYTYVAYSSPT 234
             V    +  AV  R GS   + + Q+    Y   +KG +  + L  + FY      SP 
Sbjct: 178 TYVVRRASEVAVQ-RNGSYSLVTSQQEALFKY--YLKGGS-FADLNNLMFYYLSFTKSPA 233

Query: 235 ALAG 238
            LAG
Sbjct: 234 RLAG 237


>PA3922 Non COG
          Length = 455

 Score =  105 bits (261), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 86/251 (34%), Positives = 122/251 (48%), Gaps = 24/251 (9%)

Query: 3   KVVMKRTILGLSILAVGATLAHAA-SVQDLGTTLTPLGGDKA--AGQGVPEWKAENVELP 59
           K+++   +L LS+LA     A +A     LGT+LTPLG +KA  A   +P W        
Sbjct: 5   KILLHTGVLALSLLATQVMAAVSADEAAKLGTSLTPLGAEKAGNADGSIPAWDGGLATNA 64

Query: 60  GW--SYGKLRKDYFKYKDEKPTEVIDASNVDKYADRLTPGQVALIKQV-KGYKMDIYPTH 116
           G   S G L      Y  E+P   I A NVD+Y D+LTPGQ+A+ K+    YK+ +Y TH
Sbjct: 65  GSVDSRGFLAN---PYASEQPLFTITAQNVDQYKDKLTPGQLAMFKRYPDTYKIPVYKTH 121

Query: 117 RYCAAPDFVVENTKKNVADGKIGADGWSLAEANVPGIPFPLPKTGLEVMYNSKMRYRGLG 176
           R    P  V E  K+N    K+   G  L   +    PFP+P+ GLEV++N   RYRG  
Sbjct: 122 RSATVPAAVQEAAKRNATTTKLVEGGNGLENFDTAN-PFPIPQNGLEVIWNHITRYRGGS 180

Query: 177 VDFPNTITAVSPRKGSNEWIKASQQLTLF-----YPSNVKGSTKLSTLGGVEFYTYVAYS 231
           V     +T  +P+      +  S QL  F     + +N+K     +    V FY     +
Sbjct: 181 VR--RLVTQATPQ------VNGSYQLVYFQDAFTFRTNLKDYNP-NKPSNVLFYFKQRVT 231

Query: 232 SPTALAGPPLV 242
           +P+ LAG  L+
Sbjct: 232 APSRLAGNVLL 242


>PA0383 Non COG
          Length = 448

 Score = 89.7 bits (221), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 67/215 (31%), Positives = 100/215 (46%), Gaps = 10/215 (4%)

Query: 31  LGTTLTPLGGDKA--AGQGVPEWKAENVELP-GWSYGKLRKDYFKYKDEKPTEVIDASNV 87
           L   LTPLG ++A  A   +P W     + P G+  G    D F    ++P  V+D+ N+
Sbjct: 30  LDQDLTPLGAERAGNADGSIPPWTGGITQAPAGYRPGMHHLDPFA--ADRPRLVLDSRNM 87

Query: 88  DKYADRLTPGQVALIKQVKGYKMDIYPTHRYCAAPDFVVENTKKNVADGKIGADGWSLAE 147
             Y   LTPG  AL++    Y + ++PT R  + P  + + T+ N +  ++ ADG  +  
Sbjct: 88  AAYQALLTPGTQALLQANPDYHLRVFPTRRSASLPQRLYDATRANASRAELIADGNGVQG 147

Query: 148 ANVPGIPFPLPKTGLEVMYNSKMRYRGLGVDFPNTITAVSPRKGSNEWIKASQQLTLFYP 207
           A   G+PFPLP++G E ++N  MRYRG  +       AV    GS   +K  + L   Y 
Sbjct: 148 A-AAGVPFPLPQSGQEAIWNHIMRYRGEQLHLQTNQAAVLA-NGSYNLLKLDRYLYFVYG 205

Query: 208 SNVKGSTKLSTLGGVEFYTYVAYSSPTALAGPPLV 242
              +       L    FY      +P  LAG  LV
Sbjct: 206 ---REGMIPENLDNTLFYYKYKVVAPARLAGSALV 237


>PA3421 Non COG
          Length = 456

 Score = 83.2 bits (204), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 116/239 (48%), Gaps = 14/239 (5%)

Query: 11  LGLSILAVGATLAHAA-SVQDLGTTLTPLGGDKA--AGQGVPEWKAENVELPGWSYGK-L 66
           L LS+LA   T A +      LG++LTP+G  K   A   +P W        G   GK  
Sbjct: 12  LALSLLAGSVTAAVSPDEAAKLGSSLTPIGAQKEGNADGSIPAWTGGLAASAGKVDGKGF 71

Query: 67  RKDYFKYKDEKPTEVIDASNVDKYADRLTPGQVALIKQV-KGYKMDIYPTHRYCAAPDFV 125
             D F   DEKP   I A NV++Y D+L+ GQ+A+ K+  + Y++ +Y THR  A P  +
Sbjct: 72  LSDPFA--DEKPLFTITAQNVEQYKDKLSDGQLAMFKRYPETYRIPVYKTHRTVALPAEI 129

Query: 126 VENTKKNVADGKIGADGWSLAEANVPG-IPFPLPKTGLEVMYNSKMRYRGLGVDFPNTIT 184
            E  K++  + +   DG  L+         FP+PK G+EV++N   RYR  G +   TI 
Sbjct: 130 DEAVKQSALNVQPINDGNGLSNFEKSRYYAFPIPKNGVEVLWNHITRYR--GGNLKRTIV 187

Query: 185 AVSPR-KGSNEWIKASQQLTLFYPSNVKGSTKLSTLGGVEFYTYVAYSSPTALAGPPLV 242
             +P+  GS   I+  + +   +P N+    +      + F+     ++P  LAG  L+
Sbjct: 188 QATPQTNGSFTPIRFEESVA--FPQNMPDLDQSKAANILTFFKQQV-TAPARLAGNVLL 243