BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0048.0149.p (195 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value YPO1567 [MR] COG4948 L-alanine-DL-glutamate epimerase and relate... 342 2e-94 BMEI1707 [MR] COG4948 L-alanine-DL-glutamate epimerase and relat... 335 4e-92 SMb21113 [MR] COG4948 L-alanine-DL-glutamate epimerase and relat... 331 7e-91 AGc5098 [MR] COG4948 L-alanine-DL-glutamate epimerase and relate... 327 7e-90 AGl3340 [MR] COG4948 L-alanine-DL-glutamate epimerase and relate... 86 6e-17 >YPO1567 [MR] COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily Ype Yersinia pestis Length = 400 Score = 342 bits (878), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 155/194 (79%), Positives = 177/194 (91%) Query: 1 VTIAREVLGPERKLMIDANQVWEVHQAIDWVNQLAFAQPWFIEEPTSPDDVEGHRKIREG 60 V I REVLGP+RKLMIDANQ+WE ++AI WVNQLAFA PWFIEEPT+PDD+EGHR+IR+G Sbjct: 206 VRITREVLGPDRKLMIDANQIWETNEAIPWVNQLAFANPWFIEEPTNPDDIEGHRRIRQG 265 Query: 61 IGAVKVATGEMCQNRVLFKQFIMRDAIDVVQIDSCRLGGVNEILAVMLMAAKYGKVVCPH 120 + VKVATGEMCQNR++FKQFIMR+AIDVVQID+CRLGGVNE+LAVMLMAAKY VCPH Sbjct: 266 VAPVKVATGEMCQNRIMFKQFIMREAIDVVQIDACRLGGVNEVLAVMLMAAKYDLPVCPH 325 Query: 121 AGGVGLCEYVQHLSMIDYLCISGSKEGRVTEYVDHLHEHFVDPCVVKNAAYMPPSRPGFS 180 AGGVGLCEYVQHL+MIDYLCI+G+ +GRV EYVDHLHEHFV PCV+KNAAYMPP +PGFS Sbjct: 326 AGGVGLCEYVQHLAMIDYLCIAGTDKGRVIEYVDHLHEHFVHPCVIKNAAYMPPEQPGFS 385 Query: 181 IEMKPQSLEQYRFR 194 IEM S+E+YRFR Sbjct: 386 IEMHQSSIEKYRFR 399 >BMEI1707 [MR] COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily Bme Brucella melitensis Length = 425 Score = 335 bits (859), Expect = 4e-92, Method: Compositional matrix adjust. Identities = 154/195 (78%), Positives = 175/195 (89%) Query: 1 VTIAREVLGPERKLMIDANQVWEVHQAIDWVNQLAFAQPWFIEEPTSPDDVEGHRKIREG 60 +TIAREV+GP+R LMIDANQVWEV QAI+WV +LAFA P+FIEEPTSPDDV GHRKIR Sbjct: 231 LTIAREVIGPDRYLMIDANQVWEVDQAIEWVRRLAFANPFFIEEPTSPDDVAGHRKIRAA 290 Query: 61 IGAVKVATGEMCQNRVLFKQFIMRDAIDVVQIDSCRLGGVNEILAVMLMAAKYGKVVCPH 120 IG VKVATGEMCQNR++FKQFI AIDVVQIDSCR+GG+NE+LAV+LMAAKY V PH Sbjct: 291 IGPVKVATGEMCQNRIMFKQFIAEGAIDVVQIDSCRMGGLNEVLAVLLMAAKYDLPVWPH 350 Query: 121 AGGVGLCEYVQHLSMIDYLCISGSKEGRVTEYVDHLHEHFVDPCVVKNAAYMPPSRPGFS 180 AGGVGLCEYVQHLSMIDY+ +SG+KEGRV EYVDHLHEHF+DPC+++NAAYMPPS PGFS Sbjct: 351 AGGVGLCEYVQHLSMIDYVAVSGTKEGRVIEYVDHLHEHFLDPCIIRNAAYMPPSLPGFS 410 Query: 181 IEMKPQSLEQYRFRG 195 IEMKPQS+ QY F+G Sbjct: 411 IEMKPQSIAQYAFKG 425 >SMb21113 [MR] COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily Sme Sinorhizobium meliloti Length = 400 Score = 331 bits (848), Expect = 7e-91, Method: Compositional matrix adjust. Identities = 152/195 (77%), Positives = 176/195 (90%) Query: 1 VTIAREVLGPERKLMIDANQVWEVHQAIDWVNQLAFAQPWFIEEPTSPDDVEGHRKIREG 60 + IAREV+GP+R LMIDANQVWEV +AI+WV +LAFA+P+FIEEPTSPDDV GHRKIRE Sbjct: 206 LRIAREVIGPDRYLMIDANQVWEVGEAIEWVQKLAFAKPFFIEEPTSPDDVAGHRKIREA 265 Query: 61 IGAVKVATGEMCQNRVLFKQFIMRDAIDVVQIDSCRLGGVNEILAVMLMAAKYGKVVCPH 120 IG VKVATGEMCQNR++FKQFI AID+VQIDSCR+GG+NE+LAV+L+AAKYG V PH Sbjct: 266 IGPVKVATGEMCQNRIMFKQFIAEGAIDIVQIDSCRMGGLNEVLAVLLIAAKYGLPVWPH 325 Query: 121 AGGVGLCEYVQHLSMIDYLCISGSKEGRVTEYVDHLHEHFVDPCVVKNAAYMPPSRPGFS 180 AGGVGLCEYVQHLSMIDY+ +SG+K+GRV EYVDHLHEHF+DPCV++NAAYMPP RPGFS Sbjct: 326 AGGVGLCEYVQHLSMIDYVAVSGTKDGRVIEYVDHLHEHFLDPCVIRNAAYMPPERPGFS 385 Query: 181 IEMKPQSLEQYRFRG 195 IEMK QS+E YRF G Sbjct: 386 IEMKQQSIEDYRFDG 400 >AGc5098 [MR] COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 425 Score = 327 bits (839), Expect = 7e-90, Method: Compositional matrix adjust. Identities = 148/193 (76%), Positives = 173/193 (89%) Query: 1 VTIAREVLGPERKLMIDANQVWEVHQAIDWVNQLAFAQPWFIEEPTSPDDVEGHRKIREG 60 +TI REV+GP+R LMIDANQVWEV QAI+WVN+LAF++P+FIEEPTSPDD+ GHRKIR Sbjct: 231 LTITREVIGPDRYLMIDANQVWEVDQAIEWVNKLAFSKPFFIEEPTSPDDIAGHRKIRAA 290 Query: 61 IGAVKVATGEMCQNRVLFKQFIMRDAIDVVQIDSCRLGGVNEILAVMLMAAKYGKVVCPH 120 IG+VKVATGEMCQNR++FKQFI AIDVVQIDSCR+GG+NE+LAV+L+AAKY V PH Sbjct: 291 IGSVKVATGEMCQNRIMFKQFIAEGAIDVVQIDSCRMGGLNEVLAVLLIAAKYNLPVWPH 350 Query: 121 AGGVGLCEYVQHLSMIDYLCISGSKEGRVTEYVDHLHEHFVDPCVVKNAAYMPPSRPGFS 180 AGGVGLCEYVQHLSMIDYL +SG+KEGRV EYVDHLHEHF++PC ++NAAYMPP PGFS Sbjct: 351 AGGVGLCEYVQHLSMIDYLVVSGTKEGRVIEYVDHLHEHFIEPCDIRNAAYMPPKLPGFS 410 Query: 181 IEMKPQSLEQYRF 193 IEMKP+S+E Y F Sbjct: 411 IEMKPESIETYTF 423 >AGl3340 [MR] COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 378 Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 60/204 (29%), Positives = 93/204 (45%), Gaps = 17/204 (8%) Query: 1 VTIAREVLGPERKLMIDANQVWEVHQAIDWVNQLA-FAQPWFIEEPTSPDDVEGHRKIRE 59 + RE +GP+ +LMIDAN + V +AI ++ A F WF EEP P+ ++ + ++R Sbjct: 178 IAAVREAIGPDMRLMIDANHGYTVTEAITLGDRAAGFGIDWF-EEPVVPEQLDAYARVRA 236 Query: 60 GIGAVKVATGEMCQNRVLFKQFIMRDAIDVVQIDSCRLGGVNEILAVMLMAAKYGKVVCP 119 G + VA GE R Q + A+D++Q D C GG +EI + +A +G + P Sbjct: 237 G-QPIPVAGGETWHGRYGMWQALSAGAVDILQPDLCGCGGFSEIQKIATLATLHGVRIVP 295 Query: 120 HAGGVGLCEYVQHLSMIDYLCISGSKEGRVTEY-----VDHLHEHF-----VDPCVVKNA 169 H G G VQ + + ++ RV D H F +P N Sbjct: 296 HVWGTG----VQIAAALQFMAAMTPDPVRVNPIEPIMEFDRTHNPFRQAVLREPLEAVNG 351 Query: 170 AYMPPSRPGFSIEMKPQSLEQYRF 193 P PG IE+ +L ++R Sbjct: 352 VVTIPDGPGLGIEINRDALTEFRM 375