BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0048.0147.p (297 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BMEI1717 [K] COG1414 Transcriptional regulator Bme Brucella meli... 213 4e-55 SMb21102 [K] COG1414 Transcriptional regulator Sme Sinorhizobium... 212 7e-55 mlr7155 [K] COG1414 Transcriptional regulator Mlo Mesorhizobium ... 206 6e-53 AGl810 [K] COG1414 Transcriptional regulator Atu Agrobacterium t... 199 5e-51 TM0065 [K] COG1414 Transcriptional regulator Tma Thermotoga mari... 70 4e-12 >BMEI1717 [K] COG1414 Transcriptional regulator Bme Brucella melitensis Length = 264 Score = 213 bits (542), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 110/248 (44%), Positives = 157/248 (63%), Gaps = 2/248 (0%) Query: 45 RYAAPALDKGLDILELLSRSEQMLTLNQISRQLGRSVNEIFRMVVTLEQRGYLIA-DNDH 103 RY APALDKGLDILELL+ + LT +I++ L RS NE +RM+ L +RGY+ D D Sbjct: 11 RYRAPALDKGLDILELLASVDGGLTQAEIAKHLDRSPNEFYRMLDRLVKRGYVTKLDGDR 70 Query: 104 YRLSLKLFELAHHHQPIRSLVSTALPHMRELASRAVQSTHLTVYEAGRVIVVAQVDSPER 163 Y L+LKLF LA H P+R L S A P MRELA R+ Q+ L V++ G V+V+AQ ++P+ Sbjct: 71 YSLTLKLFGLAQLHAPVRRLASFATPFMRELADRSKQANQLAVFDRGSVVVIAQQEAPDY 130 Query: 164 WAFGLKVGALVSLTDTASGHVLLAFRDEAERAAMLAAHVRMDGEQEIETAQLMRQIEDTR 223 W ++VG+ +SL DT SGHVLLAFR ER M+AAHV+ E ++ +++ R Sbjct: 131 WGISIRVGSHISLFDTGSGHVLLAFRSPEEREMMIAAHVKSRDEVNLDQ-DFYDRLDQIR 189 Query: 224 KRGHSRMESRQIRGVVNLSYPVMGANNRMLAALNVPYIERIDKKVNPSLDEVQGIVQEIS 283 +RG+ M S Q+ G NLS P++G + +AAL PYI ++ P + + ++Q+ Sbjct: 190 ERGYEMMASAQMAGAYNLSAPILGPDGTCVAALTCPYITLVNPSSAPDITQTISLLQKTV 249 Query: 284 ARLSRLMG 291 LS+L+G Sbjct: 250 RDLSKLVG 257 >SMb21102 [K] COG1414 Transcriptional regulator Sme Sinorhizobium meliloti Length = 260 Score = 212 bits (540), Expect = 7e-55, Method: Compositional matrix adjust. Identities = 111/248 (44%), Positives = 158/248 (63%), Gaps = 2/248 (0%) Query: 45 RYAAPALDKGLDILELLSRSEQMLTLNQISRQLGRSVNEIFRMVVTLEQRGYLI-ADNDH 103 +Y APALDKGLDILELL+ + LT +IS++L RS NE +RM+ L +RGY+ D D Sbjct: 8 KYRAPALDKGLDILELLASVDGGLTQAEISKRLNRSPNEFYRMLDRLVRRGYVTRIDGDL 67 Query: 104 YRLSLKLFELAHHHQPIRSLVSTALPHMRELASRAVQSTHLTVYEAGRVIVVAQVDSPER 163 Y L+LKLF LA H P+R L S A P MRELA R+ Q+ L V++ G +V+AQ ++P+ Sbjct: 68 YSLTLKLFGLAQLHAPVRRLASFATPLMRELAQRSKQANQLAVFDRGSAVVIAQQEAPDY 127 Query: 164 WAFGLKVGALVSLTDTASGHVLLAFRDEAERAAMLAAHVRMDGEQEIETAQLMRQIEDTR 223 W ++VG+ +SL DT SGHVLLAFR ER M++ HVR E + T + +++ R Sbjct: 128 WGISIRVGSHISLFDTGSGHVLLAFRSPEEREMMISEHVRSRDEINL-TPEFYARLDQIR 186 Query: 224 KRGHSRMESRQIRGVVNLSYPVMGANNRMLAALNVPYIERIDKKVNPSLDEVQGIVQEIS 283 +RG+ M S Q GV NLS P++G + R +AAL PYI ++ P + E ++ + + Sbjct: 187 ERGYEMMASAQTAGVYNLSAPILGPDGRSIAALTCPYISLVNNPSAPDITETISLLLKTA 246 Query: 284 ARLSRLMG 291 ++LS L G Sbjct: 247 SQLSALAG 254 >mlr7155 [K] COG1414 Transcriptional regulator Mlo Mesorhizobium loti Length = 261 Score = 206 bits (523), Expect = 6e-53, Method: Compositional matrix adjust. Identities = 114/262 (43%), Positives = 163/262 (62%), Gaps = 5/262 (1%) Query: 37 DDSSSGKTRYAAPALDKGLDILELLSRSEQMLTLNQISRQLGRSVNEIFRMVVTLEQRGY 96 DDS RY APALDKGLDILELL+ + LT +I+++L RS NE +RM+ L +RGY Sbjct: 2 DDSED--ERYRAPALDKGLDILELLAGVDGGLTQAEIAKKLDRSPNEFYRMLDRLVRRGY 59 Query: 97 LI-ADNDHYRLSLKLFELAHHHQPIRSLVSTALPHMRELASRAVQSTHLTVYEAGRVIVV 155 + D D Y L+LKLF LA H P+R LVS A P MRELA + Q+ L V++ G +V+ Sbjct: 60 VTRLDGDRYSLTLKLFGLAQLHAPVRRLVSYATPLMRELAETSQQANQLVVFDRGSAVVI 119 Query: 156 AQVDSPERWAFGLKVGALVSLTDTASGHVLLAFRDEAERAAMLAAHVRMDGEQEIETAQL 215 AQ ++P W ++VG+ +SL DT SGHVLLAFR + ER M++ HVR ++ ++ + Sbjct: 120 AQQEAPNYWGISIRVGSHISLFDTGSGHVLLAFRSQEERQMMISEHVR-STDKTAQSVEF 178 Query: 216 MRQIEDTRKRGHSRMESRQIRGVVNLSYPVMGANNRMLAALNVPYIERIDKKVNPSLDEV 275 +++ R RG+ M S Q GV NLS PV ++ + +AAL++PYI I+ P + Sbjct: 179 FTRLDQIRDRGYEMMASMQTAGVFNLSAPVRSSDGKAIAALSIPYITVINTPSAPDITRT 238 Query: 276 QGIVQEISARLSRLMGDSSFGS 297 ++ + +LS L G S+ GS Sbjct: 239 IELLLVTTEKLSHLAG-SAVGS 259 >AGl810 [K] COG1414 Transcriptional regulator Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 255 Score = 199 bits (507), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 109/256 (42%), Positives = 160/256 (62%), Gaps = 8/256 (3%) Query: 36 EDDSSSGKTRYAAPALDKGLDILELLSRSEQMLTLNQISRQLGRSVNEIFRMVVTLEQRG 95 +DDS RY APALDKGLDILELL+R++ LT +I++ +G+S NE++RM+ L +RG Sbjct: 3 DDDSE----RYRAPALDKGLDILELLARTDGGLTQIEIAKAIGKSPNELYRMLDRLVRRG 58 Query: 96 YLI-ADNDHYRLSLKLFELAHHHQPIRSLVSTALPHMRELASRAVQSTHLTVYEAGRVIV 154 Y+ D D + L+LK+F LAH H PIR LVS A P MR+ ++ A Q+ HL VY+ G V+V Sbjct: 59 YVQRLDGDRFSLTLKMFGLAHFHAPIRRLVSFAAPVMRDFSASAEQACHLAVYDRGSVVV 118 Query: 155 VAQVDSPERWAFGLKVGALVSLTDTASGHVLLAFRDEAERAAMLAAHVRMDGEQEIETAQ 214 +AQ +S WA ++VGA +SL T SGHVLLAF+ EA+R M+ VR G E A Sbjct: 119 IAQQESATYWAMSMRVGAQMSLFHTGSGHVLLAFQTEAQREIMMTEQVR--GSGETVPAD 176 Query: 215 LMRQIEDTRKRGHSRMESRQIRGVVNLSYPVMGANNRMLAALNVPYIERIDKKVNPSLDE 274 L ++ R G M+S Q GV N+S P++ + LA + PYI + P+ + Sbjct: 177 LAERLRQVRSNGFESMDSLQTAGVRNISAPILTLDGTALAVITCPYITTLGGTA-PTRET 235 Query: 275 VQGIVQEISARLSRLM 290 + ++++ + R+S ++ Sbjct: 236 CEQLIRDAAKRISEVV 251 >TM0065 [K] COG1414 Transcriptional regulator Tma Thermotoga maritima Length = 246 Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 53/245 (21%), Positives = 117/245 (47%), Gaps = 5/245 (2%) Query: 50 ALDKGLDILELLSRSEQMLTLNQISRQLGRSVNEIFRMVVTLEQRGYLIADNDH-YRLSL 108 L K +IL+ + ++ +++++I+ + SV+ ++ +V LE++G+++ D Y Sbjct: 3 TLKKAFEILDFIVKNPGDVSVSEIAEKFNMSVSNAYKYMVVLEEKGFVLRKKDKRYVPGY 62 Query: 109 KLFELAHHHQPIRSLVSTALPHMRELASRAVQSTHLTVYEAGRVIVVAQVDSPERWAFGL 168 KL E ++ A H+ ++ R ++ HL + + + + +V+ + Sbjct: 63 KLIEYGSFVLRRFNIRDIAHDHLVDIMKRTGETVHLILKDGFEGVYIDKVEGEQSIPMVS 122 Query: 169 KVGALVSLTDTASGHVLLAFRDEAERAAMLA-AHVRMDGEQEIETAQLM-RQIEDTRKRG 226 ++G V L TASG +LAF E E L ++ I +++ R++E RKRG Sbjct: 123 RLGMKVDLYSTASGKSILAFVPEKELKEYLKIVELKPKTPNTITNPRVLKRELEKIRKRG 182 Query: 227 HSRMESRQIRGVVNLSYPVMGANNRMLAALNVPYIERIDKKVNPSLDEVQGIVQEISARL 286 ++ G++ + P+ N +A +++ + R K ++E +++E + + Sbjct: 183 YAVDNEENEIGIMCVGVPIFDHNGYPVAGVSISGVAR--KFTEEKIEEYSDVLKEKAEEI 240 Query: 287 SRLMG 291 SR +G Sbjct: 241 SRKLG 245