BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0048.0140.p         (105 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

mll7192 [EG] COG0129 Dihydroxyacid dehydratase/phosphogluconate ...   128   3e-30
SMb20890 [EG] COG0129 Dihydroxyacid dehydratase/phosphogluconate...   115   3e-26
SMc00884 [EG] COG0129 Dihydroxyacid dehydratase/phosphogluconate...   105   2e-23
AGl1769 [EG] COG0129 Dihydroxyacid dehydratase/phosphogluconate ...    85   4e-17
SMc04144 [EG] COG0129 Dihydroxyacid dehydratase/phosphogluconate...    82   4e-16

>mll7192 [EG] COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase
           Mlo Mesorhizobium loti
          Length = 575

 Score =  128 bits (322), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 66/105 (62%), Positives = 79/105 (75%), Gaps = 5/105 (4%)

Query: 1   MSGTAYGTVILHVAPEAAAGGPLGIVQDGDFIELDAYAGKLQLDISEEEMKRRLEARAKV 60
           MSGTAYGTV+LH+APEAAAGG L +V+DGD IELD    +L+L +S+EE+  R   R   
Sbjct: 476 MSGTAYGTVVLHIAPEAAAGGVLALVRDGDLIELDVAGRRLELLVSDEELAIR---RRDW 532

Query: 61  LAERKPEMVGGYQSLYVDRVLQADEGCDFDFLVGCRGAAVPKHSH 105
                PE  GGYQSLYV+RVLQAD+GCDFDFLVG R A +P+HSH
Sbjct: 533 KPPAPPE--GGYQSLYVERVLQADKGCDFDFLVGRRDAGIPRHSH 575


>SMb20890 [EG] COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase
           Sme Sinorhizobium meliloti
          Length = 579

 Score =  115 bits (288), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 59/105 (56%), Positives = 73/105 (69%), Gaps = 4/105 (3%)

Query: 1   MSGTAYGTVILHVAPEAAAGGPLGIVQDGDFIELDAYAGKLQLDISEEEMKRRLEARAKV 60
           MSGTAYGTVILH APEAA GGPL +V++GD IE+D     L L +S+EE+ RR   RA  
Sbjct: 479 MSGTAYGTVILHTAPEAAEGGPLALVENGDLIEVDIPNRTLHLHVSDEELARR---RAAW 535

Query: 61  LAERKPEMVGGYQSLYVDRVLQADEGCDFDFLVGCRGAAVPKHSH 105
           ++  KP + GGY  LY+  V+QAD G D DFLVG RG+ V + SH
Sbjct: 536 VSPVKP-LTGGYGGLYIKTVMQADAGADLDFLVGARGSVVERDSH 579


>SMc00884 [EG] COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase
           Sme Sinorhizobium meliloti
          Length = 574

 Score =  105 bits (263), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 59/107 (55%), Positives = 71/107 (66%), Gaps = 8/107 (7%)

Query: 1   MSGTAYGTVILHVAPEAAAGGPLGIVQDGDFIELDAYAGKLQLDISEEEMKRRLEARAKV 60
           MSGTA+GTV+LHV+PEA AGGPL IV+ GD I LDA  G+L L +SEEE+  R+ A    
Sbjct: 474 MSGTAFGTVVLHVSPEANAGGPLAIVRTGDRIRLDALKGELNLLVSEEELAARMAAW--- 530

Query: 61  LAERKPEMVG--GYQSLYVDRVLQADEGCDFDFLVGCRGAAVPKHSH 105
              + PE     GY  LY D VLQAD+G D DFLVG  G+ V + SH
Sbjct: 531 ---QPPEQKWHRGYYKLYHDTVLQADKGADLDFLVGKSGSEVLRESH 574


>AGl1769 [EG] COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase
           Atu Agrobacterium tumefaciens strain C58 (Cereon)
          Length = 574

 Score = 84.7 bits (208), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 45/92 (48%), Positives = 58/92 (63%), Gaps = 4/92 (4%)

Query: 1   MSGTAYGTVILHVAPEAAAGGPLGIVQDGDFIELDAYAGKLQLDISEEEMKRRLEARAKV 60
           MSGT+YG  +LHVAPE+  GGPL +++ GD + LD    +L + +SEEE+ RR   RA  
Sbjct: 473 MSGTSYGACVLHVAPESFVGGPLALLRTGDIVRLDLPQRRLDMLVSEEEIARR---RAAW 529

Query: 61  LAERKPEMVGGYQSLYVDRVLQADEGCDFDFL 92
            A   P    GY  L+   V QAD+GCDFDFL
Sbjct: 530 QAP-APRYERGYGYLFSKHVTQADQGCDFDFL 560


>SMc04144 [EG] COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase
           Sme Sinorhizobium meliloti
          Length = 574

 Score = 81.6 bits (200), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 58/95 (61%), Gaps = 10/95 (10%)

Query: 1   MSGTAYGTVILHVAPEAAAGGPLGIVQDGDFIELDAYAGKLQLDISEEEMKRRLEARAKV 60
           MSGT+YG  ILHVAPEA  GGPL  V++GD I LD     + L++ + E++RR       
Sbjct: 475 MSGTSYGACILHVAPEAYVGGPLAAVRNGDIIALDVARRTITLEVDQAEIERR------- 527

Query: 61  LAERKP---EMVGGYQSLYVDRVLQADEGCDFDFL 92
           LAE +P   +   GY  ++ + + QA EGCDF FL
Sbjct: 528 LAEWRPPERDYSRGYLKMHAEHIQQAPEGCDFTFL 562