BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0048.0131.p         (124 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AGl3184 [G] COG1129 ABC-type sugar transport system, ATPase comp...   138   3e-33
SMb21588 [G] COG1129 ABC-type sugar transport system, ATPase com...   134   7e-32
Z5839 [G] COG1129 ABC-type sugar transport system, ATPase compon...   131   4e-31
ECs5206 [G] COG1129 ABC-type sugar transport system, ATPase comp...   131   4e-31
ytfR [G] COG1129 ABC-type sugar transport system, ATPase compone...   130   5e-31

>AGl3184 [G] COG1129 ABC-type sugar transport system, ATPase component Atu
           Agrobacterium tumefaciens strain C58 (Cereon)
          Length = 507

 Score =  138 bits (348), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 71/122 (58%), Positives = 87/122 (71%)

Query: 1   MLELSGIHKAFAGVKALTDVGLRLFPGEVHTLMGQNGAGKSTLIKVLTGVHEPDGGKIEL 60
           +LE   I K+F G+ AL  V   L  GE+H L+G+NGAGKSTLIK+LTGV+  D G I L
Sbjct: 7   LLEARAIGKSFLGITALDGVDFSLARGEIHALLGENGAGKSTLIKILTGVYHRDSGSIFL 66

Query: 61  DGRAIAPASTLEAQALGISTVYQEVNLCPNLSVAENIFVGRYPTRFGRIDWKSVHTYSIA 120
           DG  I+PA+  EAQALGI TVYQEVNL  NL+VAEN+F+GR P RFG ID  S+   S A
Sbjct: 67  DGSEISPANVGEAQALGIGTVYQEVNLLENLTVAENLFLGRQPHRFGMIDRASMQKQSQA 126

Query: 121 IV 122
           ++
Sbjct: 127 LL 128


>SMb21588 [G] COG1129 ABC-type sugar transport system, ATPase component Sme
           Sinorhizobium meliloti
          Length = 505

 Score =  134 bits (336), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 65/115 (56%), Positives = 80/115 (69%)

Query: 1   MLELSGIHKAFAGVKALTDVGLRLFPGEVHTLMGQNGAGKSTLIKVLTGVHEPDGGKIEL 60
           +L  + I K F G KAL  V   L  GEVH L+G+NGAGKSTLIK LTG +  DGG + L
Sbjct: 8   ILSATRIEKGFPGTKALDRVDFHLRRGEVHALLGENGAGKSTLIKCLTGAYRRDGGSMLL 67

Query: 61  DGRAIAPASTLEAQALGISTVYQEVNLCPNLSVAENIFVGRYPTRFGRIDWKSVH 115
           DG    P  T +AQ LGI TVYQEVNL PNL+VAEN+F+GR P RFG +D ++++
Sbjct: 68  DGAEADPRDTFDAQRLGIGTVYQEVNLLPNLTVAENLFLGRQPRRFGMVDTRTMN 122


>Z5839 [G] COG1129 ABC-type sugar transport system, ATPase component EcZ
           Escherichia coli O157:H7 EDL933
          Length = 500

 Score =  131 bits (329), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 65/122 (53%), Positives = 85/122 (69%)

Query: 1   MLELSGIHKAFAGVKALTDVGLRLFPGEVHTLMGQNGAGKSTLIKVLTGVHEPDGGKIEL 60
           +L   G+ K F GVKAL +V   L  GE+  L+G+NGAGKSTLIK LTGV+  D G I L
Sbjct: 9   ILRTEGLSKFFPGVKALDNVDFSLRRGEIMALLGENGAGKSTLIKALTGVYHADRGTIWL 68

Query: 61  DGRAIAPASTLEAQALGISTVYQEVNLCPNLSVAENIFVGRYPTRFGRIDWKSVHTYSIA 120
           +G+AI+P +T  AQ LGI TVYQEVNL PN+SVA+N+F+GR P RFG +  K +   +  
Sbjct: 69  EGQAISPKNTAHAQQLGIGTVYQEVNLLPNMSVADNLFIGREPKRFGLLRRKEMEKRATE 128

Query: 121 IV 122
           ++
Sbjct: 129 LM 130


>ECs5206 [G] COG1129 ABC-type sugar transport system, ATPase component Ecs
           Escherichia coli O157:H7
          Length = 500

 Score =  131 bits (329), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 65/122 (53%), Positives = 85/122 (69%)

Query: 1   MLELSGIHKAFAGVKALTDVGLRLFPGEVHTLMGQNGAGKSTLIKVLTGVHEPDGGKIEL 60
           +L   G+ K F GVKAL +V   L  GE+  L+G+NGAGKSTLIK LTGV+  D G I L
Sbjct: 9   ILRTEGLSKFFPGVKALDNVDFSLRRGEIMALLGENGAGKSTLIKALTGVYHADRGTIWL 68

Query: 61  DGRAIAPASTLEAQALGISTVYQEVNLCPNLSVAENIFVGRYPTRFGRIDWKSVHTYSIA 120
           +G+AI+P +T  AQ LGI TVYQEVNL PN+SVA+N+F+GR P RFG +  K +   +  
Sbjct: 69  EGQAISPKNTAHAQQLGIGTVYQEVNLLPNMSVADNLFIGREPKRFGLLRRKEMEKRATE 128

Query: 121 IV 122
           ++
Sbjct: 129 LM 130


>ytfR [G] COG1129 ABC-type sugar transport system, ATPase component Eco
           Escherichia coli K12
          Length = 417

 Score =  130 bits (328), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 65/122 (53%), Positives = 85/122 (69%)

Query: 1   MLELSGIHKAFAGVKALTDVGLRLFPGEVHTLMGQNGAGKSTLIKVLTGVHEPDGGKIEL 60
           +L   G+ K F GVKAL +V   L  GE+  L+G+NGAGKSTLIK LTGV+  D G I L
Sbjct: 9   ILRTEGLSKFFPGVKALDNVDFSLRRGEIMALLGENGAGKSTLIKALTGVYHADRGTIWL 68

Query: 61  DGRAIAPASTLEAQALGISTVYQEVNLCPNLSVAENIFVGRYPTRFGRIDWKSVHTYSIA 120
           +G+AI+P +T  AQ LGI TVYQEVNL PN+SVA+N+F+GR P RFG +  K +   +  
Sbjct: 69  EGQAISPKNTAHAQQLGIGTVYQEVNLLPNMSVADNLFIGREPKRFGLLRRKEMEKRATE 128

Query: 121 IV 122
           ++
Sbjct: 129 LM 130