BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0048.0117.p         (83 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YPO3337 [J] COG0024 Methionine aminopeptidase Ype Yersinia pestis     113   9e-26
NMA0337 [J] COG0024 Methionine aminopeptidase NmA Neisseria meni...   100   7e-22
NMB2093 [J] COG0024 Methionine aminopeptidase Nme Neisseria meni...   100   9e-22
AGc2957 [J] COG0024 Methionine aminopeptidase Atu Agrobacterium ...    96   1e-20
PA3657 [J] COG0024 Methionine aminopeptidase Pae Pseudomonas aer...    95   4e-20

>YPO3337 [J] COG0024 Methionine aminopeptidase Ype Yersinia pestis
          Length = 261

 Score =  113 bits (283), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 53/79 (67%), Positives = 60/79 (75%)

Query: 1   VLHYGQRNAGLPLKEGMIFTIEPMLNAGKRHTEQLDDGWTVVTADGSLSAQWEHMVVVTS 60
           VLHYG    G+ LK GMIFTIEPM+NAGK  T  L DGWTVVT D SLSAQWEH + VT 
Sbjct: 183 VLHYGIAQTGMLLKPGMIFTIEPMINAGKAATSVLSDGWTVVTKDRSLSAQWEHTIAVTE 242

Query: 61  KGYEILTPWPDGFGDYPAI 79
            GY++LTPWP+G G+Y AI
Sbjct: 243 SGYDLLTPWPEGTGEYEAI 261


>NMA0337 [J] COG0024 Methionine aminopeptidase NmA Neisseria meningitidis
           Z2491
          Length = 259

 Score =  100 bits (250), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 48/70 (68%), Positives = 54/70 (77%)

Query: 1   VLHYGQRNAGLPLKEGMIFTIEPMLNAGKRHTEQLDDGWTVVTADGSLSAQWEHMVVVTS 60
           VLHYG++  G  LK GMIFT+EPM+N GKRH   L+DGWTVVT D SLSAQWEH V+VT 
Sbjct: 185 VLHYGKKGQGSVLKPGMIFTVEPMINQGKRHLRILNDGWTVVTKDRSLSAQWEHEVLVTE 244

Query: 61  KGYEILTPWP 70
            GYEILT  P
Sbjct: 245 TGYEILTVSP 254


>NMB2093 [J] COG0024 Methionine aminopeptidase Nme Neisseria meningitidis
           MC58
          Length = 259

 Score =  100 bits (249), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 48/70 (68%), Positives = 54/70 (77%)

Query: 1   VLHYGQRNAGLPLKEGMIFTIEPMLNAGKRHTEQLDDGWTVVTADGSLSAQWEHMVVVTS 60
           VLHYG++  G  LK GMIFT+EPM+N GKRH   L+DGWTVVT D SLSAQWEH V+VT 
Sbjct: 185 VLHYGKKGQGPVLKPGMIFTVEPMINQGKRHLRILNDGWTVVTKDRSLSAQWEHEVLVTE 244

Query: 61  KGYEILTPWP 70
            GYEILT  P
Sbjct: 245 TGYEILTVSP 254


>AGc2957 [J] COG0024 Methionine aminopeptidase Atu Agrobacterium tumefaciens
           strain C58 (Cereon)
          Length = 278

 Score = 96.3 bits (238), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 48/79 (60%), Positives = 56/79 (70%), Gaps = 1/79 (1%)

Query: 1   VLHYGQRNAGLPLKEGMIFTIEPMLNAGKRHTEQLDDGWTVVTADGSLSAQWEHMVVVTS 60
           +LHYGQ N G  ++EGMIFTIEPM+N GK H + L DGWT VT D SLSAQ+EH V VT+
Sbjct: 197 ILHYGQPNEGPEIREGMIFTIEPMINLGKPHVKVLSDGWTAVTRDRSLSAQYEHAVGVTA 256

Query: 61  KGYEILTPWPDGFGDYPAI 79
            G EI T  P GF D P +
Sbjct: 257 TGCEIFTLSPGGF-DRPGL 274


>PA3657 [J] COG0024 Methionine aminopeptidase Pae Pseudomonas aeruginosa
          Length = 261

 Score = 94.7 bits (234), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 44/67 (65%), Positives = 51/67 (76%)

Query: 1   VLHYGQRNAGLPLKEGMIFTIEPMLNAGKRHTEQLDDGWTVVTADGSLSAQWEHMVVVTS 60
           VLHYG+   G+ LKEGMIFTIEPM+N G+  T  L DGWT +T D  LSAQWEH V+VT+
Sbjct: 182 VLHYGRAGTGIELKEGMIFTIEPMINQGRPETRLLGDGWTAITKDRKLSAQWEHTVLVTA 241

Query: 61  KGYEILT 67
            GYEILT
Sbjct: 242 DGYEILT 248