BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0048.0042.p         (155 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc3046 [G] COG3839 ABC-type sugar transport systems, ATPase com...   203   1e-52
SMc02519 [G] COG3839 ABC-type sugar transport systems, ATPase co...   162   3e-40
AGl1904 [G] COG3839 ABC-type sugar transport systems, ATPase com...   160   1e-39
mll0708 [G] COG3839 ABC-type sugar transport systems, ATPase com...   151   6e-37
APE1635 [G] COG3839 ABC-type sugar transport systems, ATPase com...   130   7e-31

>RSc3046 [G] COG3839 ABC-type sugar transport systems, ATPase components Rso
           Ralstonia solanacearum
          Length = 372

 Score =  203 bits (516), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 97/136 (71%), Positives = 111/136 (81%)

Query: 1   VTLELKQVAKTVGAETHLYPLDLNLAKGGINVLLGPTQAGKTSLMRIIAGLDKPTAGRVL 60
           + LEL QV    GA+THLYP  + LA G INVLLGPTQAGKT+LMRI+AGLD+PT GRVL
Sbjct: 1   MILELDQVTAVAGAQTHLYPTSVRLAPGAINVLLGPTQAGKTTLMRIMAGLDRPTTGRVL 60

Query: 61  VDGQDVTGVGVRERNLAMVYQQFINYPGLTVFENIAAPLRLQKQPEQEISKRVKEIAEKL 120
           VDG+DVTGVGVR+RNLAMVYQQFINYP +TV++NIA+PLRLQ     EI  RV+ +A KL
Sbjct: 61  VDGEDVTGVGVRDRNLAMVYQQFINYPAMTVYDNIASPLRLQGTARDEIDARVRTVAAKL 120

Query: 121 HIAHLLQRLPGELSGG 136
           HI HLLQRLP  LSGG
Sbjct: 121 HIDHLLQRLPAALSGG 136


>SMc02519 [G] COG3839 ABC-type sugar transport systems, ATPase components Sme
           Sinorhizobium meliloti
          Length = 356

 Score =  162 bits (410), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 74/134 (55%), Positives = 103/134 (76%)

Query: 3   LELKQVAKTVGAETHLYPLDLNLAKGGINVLLGPTQAGKTSLMRIIAGLDKPTAGRVLVD 62
           LE+K+++K VG ETH++P DL L +G +NVLLGPT +GKTSLMR++AGLDKP +G +  D
Sbjct: 2   LEMKKISKVVGGETHIHPTDLVLERGTLNVLLGPTLSGKTSLMRLMAGLDKPASGSIFFD 61

Query: 63  GQDVTGVGVRERNLAMVYQQFINYPGLTVFENIAAPLRLQKQPEQEISKRVKEIAEKLHI 122
           G DVTGV V++R++AMVYQQFINYP +TV+ENIA+P+R+++     + + V++ AE L +
Sbjct: 62  GADVTGVPVQKRSVAMVYQQFINYPAMTVYENIASPMRIKRADGATVDREVRKAAELLKL 121

Query: 123 AHLLQRLPGELSGG 136
              L R P  LSGG
Sbjct: 122 TPYLDRTPLNLSGG 135


>AGl1904 [G] COG3839 ABC-type sugar transport systems, ATPase components Atu
           Agrobacterium tumefaciens strain C58 (Cereon)
          Length = 356

 Score =  160 bits (404), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 73/134 (54%), Positives = 102/134 (76%)

Query: 3   LELKQVAKTVGAETHLYPLDLNLAKGGINVLLGPTQAGKTSLMRIIAGLDKPTAGRVLVD 62
           LEL+ V+K VG + H++P DL L +G +NVLLGPT +GKT+LMR++AGLDKP+ G +L +
Sbjct: 2   LELRNVSKMVGGDYHIHPTDLTLQRGSLNVLLGPTLSGKTTLMRLMAGLDKPSGGSILFN 61

Query: 63  GQDVTGVGVRERNLAMVYQQFINYPGLTVFENIAAPLRLQKQPEQEISKRVKEIAEKLHI 122
           G+DVTG  V++RN+AMVYQQFINYP L+V+ENIA+P+R+  + +  I + V++ AE L +
Sbjct: 62  GEDVTGWPVQKRNVAMVYQQFINYPALSVYENIASPMRVAGKDQSTIDREVRKAAELLRL 121

Query: 123 AHLLQRLPGELSGG 136
              L R P  LSGG
Sbjct: 122 TPYLDRTPLNLSGG 135


>mll0708 [G] COG3839 ABC-type sugar transport systems, ATPase components Mlo
           Mesorhizobium loti
          Length = 359

 Score =  151 bits (381), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 75/134 (55%), Positives = 96/134 (71%)

Query: 3   LELKQVAKTVGAETHLYPLDLNLAKGGINVLLGPTQAGKTSLMRIIAGLDKPTAGRVLVD 62
           LEL+ V KTVGA  H+  + L L  G +NVLLGPT +GKTSLMR++AGLD PT+G V  D
Sbjct: 2   LELRNVTKTVGAVEHIRDVSLTLQHGSLNVLLGPTLSGKTSLMRLMAGLDVPTSGSVWFD 61

Query: 63  GQDVTGVGVRERNLAMVYQQFINYPGLTVFENIAAPLRLQKQPEQEISKRVKEIAEKLHI 122
           G DVTG+ V++R +AMVYQQFINYP +TV+ENIA+PLR+    + +I  +V+E A  L +
Sbjct: 62  GHDVTGMPVQKRKIAMVYQQFINYPAMTVYENIASPLRVAGAEQGKIDSQVREAAALLKL 121

Query: 123 AHLLQRLPGELSGG 136
              L R P  LSGG
Sbjct: 122 TPYLDRTPLSLSGG 135


>APE1635 [G] COG3839 ABC-type sugar transport systems, ATPase components Ape
           Aeropyrum pernix
          Length = 354

 Score =  130 bits (328), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 64/134 (47%), Positives = 91/134 (67%)

Query: 3   LELKQVAKTVGAETHLYPLDLNLAKGGINVLLGPTQAGKTSLMRIIAGLDKPTAGRVLVD 62
           + L+ + K  G    L  +DL +  G   VLLGP+  GKT+ +RI+AGL++P AGRV  D
Sbjct: 6   VRLEGIVKRFGKTVALKGIDLEIKDGEAVVLLGPSGCGKTTTLRIVAGLERPDAGRVYFD 65

Query: 63  GQDVTGVGVRERNLAMVYQQFINYPGLTVFENIAAPLRLQKQPEQEISKRVKEIAEKLHI 122
           G+DVTG+  ++RN+AMV+Q +  +P + VF+NIA PL+++K P  EI +RV+  AE L I
Sbjct: 66  GRDVTGLPPKDRNVAMVFQSYALWPHMRVFDNIAFPLKIKKLPRDEIVRRVRWAAELLEI 125

Query: 123 AHLLQRLPGELSGG 136
            HLL R P +LSGG
Sbjct: 126 DHLLDRYPHQLSGG 139