BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0048.0021.p         (88 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSp0765 [S] COG4104 Uncharacterized conserved protein Rso Ralsto...    79   3e-15
RSc0961 [S] COG4104 Uncharacterized conserved protein Rso Ralsto...    77   1e-14
RSp0204 [S] COG4104 Uncharacterized conserved protein Rso Ralsto...    76   1e-14
YPO0866 [S] COG4104 Uncharacterized conserved protein Ype Yersin...    76   2e-14
RSp0515 [S] COG4104 Uncharacterized conserved protein Rso Ralsto...    75   3e-14

>RSp0765 [S] COG4104 Uncharacterized conserved protein Rso Ralstonia
          solanacearum
          Length = 89

 Score = 79.0 bits (193), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 44/85 (51%), Positives = 51/85 (60%), Gaps = 1/85 (1%)

Query: 1  MAAAIIRLGDPTSHGGRVITASTTHLIGGLGVARVGDKVMCPLPGH-GVNAIIEGAPSFQ 59
          M    I LGD T HGG VITAS     GG G+A VGDKV CP  GH G   I+ G P+  
Sbjct: 1  MTRPFILLGDKTDHGGVVITASGNTTTGGKGIACVGDKVTCPQSGHGGTTVIVTGDPNVV 60

Query: 60 IDGRNVALHGQRAACGCTLVSTLAT 84
          IDGR  A HG + ACG TL+++  T
Sbjct: 61 IDGRQAARHGDKTACGATLLASQGT 85


>RSc0961 [S] COG4104 Uncharacterized conserved protein Rso Ralstonia
          solanacearum
          Length = 88

 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 40/81 (49%), Positives = 52/81 (64%), Gaps = 1/81 (1%)

Query: 5  IIRLGDPTSHGGRVI-TASTTHLIGGLGVARVGDKVMCPLPGHGVNAIIEGAPSFQIDGR 63
          IIRLGD T HGG+VI TA+    + G+ VAR GD+  CP  GH    IIEG   F++DG 
Sbjct: 4  IIRLGDSTDHGGKVIQTAARQFKVDGVPVARKGDRCSCPREGHQDCVIIEGDEHFKVDGV 63

Query: 64 NVALHGQRAACGCTLVSTLAT 84
           VA  G + +CG  L++T+AT
Sbjct: 64 PVAFEGHKTSCGAMLIATVAT 84


>RSp0204 [S] COG4104 Uncharacterized conserved protein Rso Ralstonia
          solanacearum
          Length = 88

 Score = 76.3 bits (186), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 37/81 (45%), Positives = 51/81 (62%), Gaps = 1/81 (1%)

Query: 5  IIRLGDPTSHGGRVITASTTHL-IGGLGVARVGDKVMCPLPGHGVNAIIEGAPSFQIDGR 63
          +IRLGDPT HGG V+  S  +  + G+ VAR GD+  CP  GH    IIEG   F++DG 
Sbjct: 4  VIRLGDPTEHGGAVVQTSAPNFKVNGVAVARKGDRCSCPRKGHQDCVIIEGDEHFKVDGV 63

Query: 64 NVALHGQRAACGCTLVSTLAT 84
           +A  G + +CG TL +T+A+
Sbjct: 64 PIAFEGHKTSCGATLTATVAS 84


>YPO0866 [S] COG4104 Uncharacterized conserved protein Ype Yersinia pestis
          Length = 101

 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 40/82 (48%), Positives = 52/82 (63%), Gaps = 2/82 (2%)

Query: 5  IIRLGDPTSHGGRVITASTTHLIGGLGVARVGDKVMCPLPGHGVNAIIEGAPSFQIDGRN 64
          +I +GD T+HGG+V++ S      G+GVAR+ D V CP   HG   IIE  PSF+ +G  
Sbjct: 17 VICIGDKTTHGGQVLSGSGKMKFAGIGVARLNDPVSCPQ--HGNTFIIEAHPSFKDNGIP 74

Query: 65 VALHGQRAACGCTLVSTLATAT 86
          VA HG R  CGCTL+S+   AT
Sbjct: 75 VAFHGHRCGCGCTLISSQKGAT 96


>RSp0515 [S] COG4104 Uncharacterized conserved protein Rso Ralstonia
          solanacearum
          Length = 88

 Score = 75.5 bits (184), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 38/78 (48%), Positives = 48/78 (61%), Gaps = 1/78 (1%)

Query: 5  IIRLGDPTSHGGRVITASTTHL-IGGLGVARVGDKVMCPLPGHGVNAIIEGAPSFQIDGR 63
          IIRLGDPT HGG V+  S  +  + G+ VAR GD+  CP  GH    IIEG   F++DG 
Sbjct: 4  IIRLGDPTDHGGAVVQTSAPNFKVNGIAVARKGDRCSCPREGHQDCVIIEGDEHFKVDGV 63

Query: 64 NVALHGQRAACGCTLVST 81
           VA  G R +CG  L++T
Sbjct: 64 PVAFEGHRTSCGAVLIAT 81