BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0046.0001.p (394 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BMEII0964 Non COG 144 5e-34 AGl968 [P] COG3213 Uncharacterized protein involved in response ... 130 7e-30 SMa1252 [P] COG3213 Uncharacterized protein involved in response... 114 5e-25 VC2330 [P] COG3213 Uncharacterized protein involved in response ... 104 3e-22 PA2662 [P] COG3213 Uncharacterized protein involved in response ... 95 3e-19 >BMEII0964 Non COG Length = 413 Score = 144 bits (362), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 112/288 (38%), Positives = 157/288 (54%), Gaps = 9/288 (3%) Query: 109 LASALLPLWLAAAVELAFPLAICALAWREIIAAGNRRNLPMPVPLALLTVADL-LMYLPL 167 LA L+ + +A A+E F + +A REIIA + RNL + +A + +A+ YL L Sbjct: 126 LAPDLVHIDVAVAIESLFLPFLLFIAAREIIAGHHWRNLKVLGGIAGVMIANFAFHYLVL 185 Query: 168 AGIDVPQGLSWRLALAAVAILMSVIGARIIPAFTRNWLVARRSPVQPASSRWLDIAATAS 227 DV + R+ ++A IL+++IG RIIP+FTRNWL P D Sbjct: 186 TDGDVT--FANRIGVSAYVILVTLIGGRIIPSFTRNWLNRMGKTRFPVPFNRYDALTLIV 243 Query: 228 LHAALLGWALFPEVKALGLLLLTAAALNLWRVARWRGMATLAEPLLLVLHLGYLWIIAGA 287 A L W PE +L L AAA +L R+ RWRG E LL++LH+ YL++ G Sbjct: 244 GVVACLSWIFLPESSLTAVLALIAAAFHLVRLYRWRGWTVAREKLLVILHVAYLFVPGGF 303 Query: 288 ALLGLSLL-QVAPIQVAAIHALTAGAMGSMVLGVMARVSLGHTGRTLSADASTRIIFLII 346 + LS L ++ P +A+H +T GA+G+M+L VM R + GHTGR L A T+I ++ I Sbjct: 304 VAIALSALDRLNPF--SALHVMTVGAIGAMMLAVMTRATRGHTGRELVASPMTQIAYVCI 361 Query: 347 SVAAFCRIAATLSLSNAY--FLQLSALCWVLAFLLFVARYGAWLLRPR 392 AA R A + + N + L SAL W+LAF LFV YG LLR R Sbjct: 362 IAAAVIRPFAEI-MPNFFHTLLAASALLWMLAFGLFVVEYGPMLLRKR 408 >AGl968 [P] COG3213 Uncharacterized protein involved in response to NO Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 424 Score = 130 bits (326), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 99/275 (36%), Positives = 146/275 (53%), Gaps = 3/275 (1%) Query: 119 AAAVELAFPLAICALAWREIIAAGNRRNLPMPVPLALLTVADLLMYLPLAGIDVPQGLSW 178 AAAV+ F A+ A+ RE+IA ++L + L L+VA+++ ++ G D Q ++ Sbjct: 147 AAAVDGLFLPALLAICAREVIAGRKWKDLKVLGGLLALSVANIVFHVAAIGGDHSQ-MAT 205 Query: 179 RLALAAVAILMSVIGARIIPAFTRNWLVARRSPVQPASSRWLDIAATASLHAALLGWALF 238 RLA++A +L+ ++G RI+P+FTRNWL P D AA + AL W + Sbjct: 206 RLAVSAYTVLVIIVGGRIVPSFTRNWLNRFGRTDFPVPYNGFDTAAILTGIVALAVWTIE 265 Query: 239 PEVKALGLLLLTAAALNLWRVARWRGMATLAEPLLLVLHLGYLWIIAGAALLGLSLLQVA 298 PE L AA ++ R+ RWRG T E +L+VLH+ Y +I G + L+ L V Sbjct: 266 PESMLAVSTALLAAFMHAVRLIRWRGWTTRPEQVLVVLHVAYAFIPVGFIAIALAALDVM 325 Query: 299 PIQVAAIHALTAGAMGSMVLGVMARVSLGHTGRTLSADASTRIIFLIISVAAFCRIAAT- 357 + + +H T G +G M+L VM R SLGHTGR L+A T ++ + A R AA Sbjct: 326 DTR-SVLHIFTVGVIGCMMLAVMTRASLGHTGRKLAASRLTIAAYVSLIACALLRPAAEF 384 Query: 358 LSLSNAYFLQLSALCWVLAFLLFVARYGAWLLRPR 392 L + SAL W++ F LF YG L+R R Sbjct: 385 LPGVMMHLYGCSALLWIVGFGLFCVEYGPILMRER 419 >SMa1252 [P] COG3213 Uncharacterized protein involved in response to NO Sme Sinorhizobium meliloti Length = 403 Score = 114 bits (284), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 92/275 (33%), Positives = 141/275 (51%), Gaps = 3/275 (1%) Query: 119 AAAVELAFPLAICALAWREIIAAGNRRNLPMPVPLALLTVADLLMYLPLAGIDVPQGLSW 178 AAA++ F A+ + RE+IA ++L + L L++A+ + + D ++ Sbjct: 127 AAAIDGLFLPALLLICAREVIAGRKWKDLKVLGGLLALSLANACFHFAVVTGDHVH-IAM 185 Query: 179 RLALAAVAILMSVIGARIIPAFTRNWLVARRSPVQPASSRWLDIAATASLHAALLGWALF 238 RL ++A L+++IG RI+P+FTRNWL P D A + AAL W L Sbjct: 186 RLGISAYVALVTIIGGRILPSFTRNWLNRAGRTEFPVPYNHFDTVAILAGIAALGAWTLA 245 Query: 239 PEVKALGLLLLTAAALNLWRVARWRGMATLAEPLLLVLHLGYLWIIAGAALLGLSLLQVA 298 P+ + AA L+ R+ARWRG T E LL++LH+ Y ++ G A G+ L Sbjct: 246 PDHPVTAVPAFAAALLHTVRLARWRGWRTWPEMLLVILHVAYAFVPLGFAATGIGALGFV 305 Query: 299 PIQVAAIHALTAGAMGSMVLGVMARVSLGHTGRTLSADASTRIIFLIISVAAFCR-IAAT 357 +++ +H LT GA+ +M+L VM R S GHTG L+A T + + ++A R +A Sbjct: 306 E-ELSVMHVLTVGAIAAMMLAVMTRASRGHTGYPLTASRLTAASYAAVVLSALLRPLAEM 364 Query: 358 LSLSNAYFLQLSALCWVLAFLLFVARYGAWLLRPR 392 L +S W+LAF LF YG L+R R Sbjct: 365 LPEIAPTLYAVSGSAWILAFALFCIEYGPILVRKR 399 >VC2330 [P] COG3213 Uncharacterized protein involved in response to NO Vch Vibrio cholerae Length = 414 Score = 104 bits (260), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 100/292 (34%), Positives = 147/292 (50%), Gaps = 26/292 (8%) Query: 114 LPLWLAAAVELAFPLAICALAWREIIAAGNRRNLPMPVPLALLTVA-DLLMYLPLAGID- 171 +PLWL +++E F LA+ ++ A RNL +PL LL +A + Y + G+ Sbjct: 132 VPLWLTSSIEALFLLAVAYEVGLRVVKAKGWRNLFF-IPLFLLAIAANFASYATIKGMPP 190 Query: 172 VPQGLSWRLALAAVAILMSVIGARIIPAFT-RNWLVARRSPVQPASSRWLDIAATASLHA 230 P W+ L +L+SV+G R+IP FT R + + P+ LD+ A SL Sbjct: 191 FPSSAVWQAMLWWFMLLLSVMGGRVIPFFTARRFQFTKAEPILA-----LDVIANGSL-L 244 Query: 231 ALLGWALFPEVKA-LGL-LLLTAAALNLWRVARWRGMATLAEPLLLVLHLGYLWIIAGAA 288 AL + FP A LG L+L A L R RW+ T +EPL+ LH YL Sbjct: 245 ALFVLSFFPLTMAQLGQPLMLVAGVAQLIRFLRWQPWRTFSEPLVWSLHAAYL------- 297 Query: 289 LLGLSLLQVAPIQVA-----AIHALTAGAMGSMVLGVMARVSLGHTGRTLSADASTRIIF 343 + LSLL + A +H GA+ +VL ++ARV++GHTGR + + + F Sbjct: 298 CIPLSLLLRGGVSNAWLNHNLLHLFAIGALSGLVLSMIARVTMGHTGRAIYQGPNMQWAF 357 Query: 344 LIISVAAFCRIAATLSLSNA--YFLQLSALCWVLAFLLFVARYGAWLLRPRL 393 + + +AA R L ++ LSA WV+AF LFV R+GA LL+PR+ Sbjct: 358 IALLLAAVVRGVGVGLLPQQLLIWVNLSAALWVIAFALFVLRFGAMLLKPRV 409 >PA2662 [P] COG3213 Uncharacterized protein involved in response to NO Pae Pseudomonas aeruginosa Length = 397 Score = 95.1 bits (235), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 85/227 (37%), Positives = 115/227 (50%), Gaps = 28/227 (12%) Query: 181 ALAAVAILMSVIGARIIPAFTRNWLVARRSPVQPASSRWLDIAATASLHAALLGWALFPE 240 AL +A +M++IG R+IP FT+ L R+ V PA + WLD + LLG L Sbjct: 180 ALWLIAGMMNLIGGRVIPFFTQRGL-GRQQQV-PAIA-WLD-------NGILLGCVLVAL 229 Query: 241 VKALGL----------LLLTAAALNLWRVARWRGMATLAEPLLLVLHLGYLWIIAGAALL 290 + A G+ L LWR+ RWR PLL LHL Y WI A L Sbjct: 230 LTAAGVTTQPTPWLAGLFAALGGAQLWRLWRWRDRGIWQVPLLWSLHLAYFWI--AVAPL 287 Query: 291 GLSL----LQVAPIQVAAIHALTAGAMGSMVLGVMARVSLGHTGRTLSADASTRIIFLII 346 G++L L +AP Q A+HAL G MG ++L ++ARV+LGHTGR L A+ F ++ Sbjct: 288 GMALWSLGLALAPSQ--ALHALAVGGMGGLILAMLARVTLGHTGRALQPPAAMPWAFALL 345 Query: 347 SVAAFCRIAATLSLSNAYFLQLSALCWVLAFLLFVARYGAWLLRPRL 393 ++ R+ L + L L+ W LAFLLF Y L RPR+ Sbjct: 346 NLGCAARVFLPSLLPANWALPLAGGLWALAFLLFAWFYAPMLCRPRV 392