BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0045.0051.p (288 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA2307 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transp... 386 e-107 RSp1508 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate trans... 326 3e-89 CAC0108 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate trans... 117 3e-26 MJ0413 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transp... 110 3e-24 BH1210 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transp... 106 5e-23 >PA2307 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Pae Pseudomonas aeruginosa Length = 288 Score = 386 bits (992), Expect = e-107, Method: Compositional matrix adjust. Identities = 222/288 (77%), Positives = 250/288 (86%) Query: 1 MAQTPPIRDEYEIPLTPLPGLVLQRQFSLPQRLWQQGWVRKGAILLLLALVWEGVARWQN 60 M++ +R+EYE+ L PL + L+R+ L QRLWQQ W+RKG IL LLAL WE AR Q Sbjct: 1 MSRVTRVREEYEVQLEPLLEVSLERRLPLSQRLWQQSWLRKGLILALLALAWELAARVQG 60 Query: 61 NDLLLPSFLQTAQAFIDGLRSGELFGKTWLSLQVLLKAYVLGIVAAFALTTLAVSTQFGR 120 NDLLLP FLQTA+A +GL SGEL K +SL VL K Y+LGIV AF LT+LAVSTQ GR Sbjct: 61 NDLLLPGFLQTARALGEGLASGELPAKAGISLLVLFKGYLLGIVLAFVLTSLAVSTQLGR 120 Query: 121 DLLGTLTSMFNPLPAIALLPIALLWFGLGQGSLIFVLVHSVLWALAVNTYAGFLGVSDTL 180 DLLGTLT+MFNPLPAIALLP+ALLWFGLGQ SLIFVLVHSVLWALA+NTYAGFLGVS+TL Sbjct: 121 DLLGTLTAMFNPLPAIALLPLALLWFGLGQNSLIFVLVHSVLWALALNTYAGFLGVSETL 180 Query: 181 RMAGRNYGLRGLGFVLQVLVPAALPSILAGLRIGWAFAWRTLIAAELVFGATSGKGGLGW 240 RMAGRNYGLRGL FVL +LVPAALPSILAGL+IGWAFAWRTLIAAELVFGA+SGKGGLGW Sbjct: 181 RMAGRNYGLRGLRFVLLILVPAALPSILAGLKIGWAFAWRTLIAAELVFGASSGKGGLGW 240 Query: 241 YIFQNRNELYTDKVFACLAMVILIGLLVENLVFNTLERVTVKKWGMQR 288 YIFQNRNELYTDKVFA LA+V+LIGLLVENLVF ++ER+TVK+WG+QR Sbjct: 241 YIFQNRNELYTDKVFAGLAVVVLIGLLVENLVFGSIERLTVKRWGVQR 288 >RSp1508 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Rso Ralstonia solanacearum Length = 298 Score = 326 bits (836), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 168/266 (63%), Positives = 210/266 (78%) Query: 22 VLQRQFSLPQRLWQQGWVRKGAILLLLALVWEGVARWQNNDLLLPSFLQTAQAFIDGLRS 81 V+++ S+ +RL+ Q W+RK AIL+ LAL WEG ARW +N LLLP+F TA+A GL Sbjct: 32 VIEKPLSMAERLYAQAWLRKLAILVALALAWEGGARWLDNPLLLPTFSDTARALWAGLAD 91 Query: 82 GELFGKTWLSLQVLLKAYVLGIVAAFALTTLAVSTQFGRDLLGTLTSMFNPLPAIALLPI 141 G LF + S+Q LL Y LG+ + AL L + ++ G+D L TLT+MFNPLPAIALLPI Sbjct: 92 GTLFARIGTSMQTLLAGYALGLALSCALVVLGIGSRLGQDFLETLTAMFNPLPAIALLPI 151 Query: 142 ALLWFGLGQGSLIFVLVHSVLWALAVNTYAGFLGVSDTLRMAGRNYGLRGLGFVLQVLVP 201 AL+WFGLG GSLIFV+VHSV+WA+++NT+AGFL VS+TLRM GRNYGL G+ ++ Q+L+P Sbjct: 152 ALVWFGLGNGSLIFVIVHSVVWAVSLNTHAGFLSVSNTLRMVGRNYGLSGMAYLTQILIP 211 Query: 202 AALPSILAGLRIGWAFAWRTLIAAELVFGATSGKGGLGWYIFQNRNELYTDKVFACLAMV 261 AA PSIL GL+IGWAFAWRTLIA+ELVFG +SG+GGLGWYI++N+N L +VFA L V Sbjct: 212 AAFPSILTGLKIGWAFAWRTLIASELVFGVSSGQGGLGWYIYENKNLLQIPEVFAGLLTV 271 Query: 262 ILIGLLVENLVFNTLERVTVKKWGMQ 287 ILIGLLVENLVF TLE TVK+WGMQ Sbjct: 272 ILIGLLVENLVFRTLEARTVKRWGMQ 297 >CAC0108 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Cac Clostridium acetobutylicum Length = 265 Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 74/260 (28%), Positives = 133/260 (51%), Gaps = 14/260 (5%) Query: 37 GWVRKGAILLLLALVWEGVAR--------WQNNDLLLPSFLQTAQAFIDGLRSGELFGKT 88 G R+ ++L +WE + + W+ P + A A++ ++ LF T Sbjct: 10 GIFRRVLFYIILIAIWELIYKVFVDILGVWKAYTFPSPGEVYNALAYL--VKDNTLFIAT 67 Query: 89 WLSLQVLLKAYVLGIVAAFALTTLAVSTQFGRDLLGTLTSMFNPLPAIALLPIALLWFGL 148 SL L+ Y++ + AL + + ++ + L L LP++ +P A+LW+G+ Sbjct: 68 GASLTRLVIGYIIALFIGIALALVCIKYKYVDENLTPLMLGLQTLPSVCWIPFAILWYGI 127 Query: 149 GQGSLIFVLVHSVLWALAVNTYAGFLGVSDTLRMAGRNYGLRGLGFVLQVLVPAALPSIL 208 + S+IFV V L+++A++T +G V+ A R G RG V++P+ALP I+ Sbjct: 128 DERSIIFVTVVGSLFSIAISTISGVKNVNPIYVKAARTMGARGKNLYFDVVIPSALPEII 187 Query: 209 AGLRIGWAFAWRTLIAAELVFGATSGKGGLGWYIFQNRNELYTDKVFACLAMVILIGLLV 268 +G+R GW+FAWR L+A E++ S GLG + R +V A + ++I GL+ Sbjct: 188 SGMRQGWSFAWRALMAGEML----SATKGLGQVLTAGRELGDISQVMAVMIIIIAFGLIF 243 Query: 269 ENLVFNTLERVTVKKWGMQR 288 + L+F +E+ K G+++ Sbjct: 244 DKLLFEKVEKNIRYKCGLEK 263 >MJ0413 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Mja Methanococcus jannaschii Length = 267 Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 74/252 (29%), Positives = 132/252 (52%), Gaps = 7/252 (2%) Query: 22 VLQRQFSLPQRLWQQGWVRKGAILLLLALVWEGVARWQNNDLLLPSFLQTAQAFIDG--- 78 ++ + + ++ + V K ++ L ++WE +A + NN ++LP I Sbjct: 1 MMNHKKGISVKINTKELVLKISLPALAVVIWELLAIYINNPVILPRVEAVINVLIHPFQG 60 Query: 79 -LRSGELFGKTWLSLQVLLKAYVLGIVAAFALTTLAVSTQFGRDLLGTLTSMFNPLPAIA 137 L +G L T +S++ ++ ++L A L L + L TL + P+P +A Sbjct: 61 ILGTGSLIDNTIISIKRVISGFLLASAVAIPLGILMGYYRTVNSLCDTLIELLRPIPPLA 120 Query: 138 LLPIALLWFGLGQGSLIFVLVHSVLWALAVNTYAGFLGVSDTLRMAGRNYGLRGLGFVLQ 197 +P++L WFGLG+ S+IF++ + + +NT +G GV L A G +G +++ Sbjct: 121 WVPLSLAWFGLGEMSMIFIIFIGAFFPILINTISGVKGVPTPLIEAALTLGAKGRDILIK 180 Query: 198 VLVPAALPSILAGLRIGWAFAWRTLIAAELVFGATSGKGGLGWYIFQNRNELYTDKVFAC 257 V++PA+ PSIL GLR+G AW ++AAE++ S GLG+ I + D V AC Sbjct: 181 VVIPASSPSILTGLRVGAGIAWMCVVAAEML---PSSNAGLGYLIMYAYSLSRMDVVIAC 237 Query: 258 LAMVILIGLLVE 269 + ++ LIGL+++ Sbjct: 238 MIIIGLIGLVLD 249 >BH1210 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Bha Bacillus halodurans Length = 252 Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 77/246 (31%), Positives = 125/246 (50%), Gaps = 13/246 (5%) Query: 48 LALVWEGVARWQ-NNDLLLPS----FLQTAQAFIDGLRSGELFGKTWLSLQVLLKAYVLG 102 L +WE V R + L PS F++ + F + +G L T+ SL + + + Sbjct: 14 LFFIWELVYRLELFQTRLFPSPLLSFVELYKGFFE---TGILTVATFESLSRIAIGFTIA 70 Query: 103 IVAAFALTTLAVSTQFGRDLLGTLTSMFNPLPAIALLPIALLWFGLGQGSLIFVLVHSVL 162 +V L L ++ + LG+L +P+I LPIAL+ G ++IF++V Sbjct: 71 VVVGSCLGILLALSKIADETLGSLVIALQSVPSIVWLPIALVVLQTGNTAIIFIIVLGGT 130 Query: 163 WALAVNTYAGFLGVSDTLRMAGRNYGLRGLGFVLQVLVPAALPSILAGLRIGWAFAWRTL 222 WA+ +N G V L A R G RG V +V++PA++PS L G+R+ WAF WR L Sbjct: 131 WAMTMNMRMGIKNVQPLLIRAARTMGYRGAELVWKVMIPASIPSALTGMRLAWAFGWRAL 190 Query: 223 IAAELVFGATSGKGGLGWYIFQNRNELYTDKVFACLAMVILIGLLVENLVFNTLERVTVK 282 IA EL+ G+ + R+ + V A + ++ ++GL+VE L+FN +ER + Sbjct: 191 IAGELLGRGGLGR-----TLLDARDFFNMELVIAIMMIIAVVGLIVEYLIFNPIERKVLS 245 Query: 283 KWGMQR 288 +WG + Sbjct: 246 RWGYAK 251