BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0045.0020.p         (175 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

PA1910 [P] COG1629 Outer membrane receptor proteins, mostly Fe t...   121   7e-28
CC2928 Non COG                                                        113   2e-25
YPO1753 [P] COG1629 Outer membrane receptor proteins, mostly Fe ...   113   2e-25
RSp0414 [P] COG1629 Outer membrane receptor proteins, mostly Fe ...   101   9e-22
NMA1558 [P] COG1629 Outer membrane receptor proteins, mostly Fe ...    71   1e-12

>PA1910 [P] COG1629 Outer membrane receptor proteins, mostly Fe transport
           Pae Pseudomonas aeruginosa
          Length = 804

 Score =  121 bits (304), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 61/128 (47%), Positives = 87/128 (67%), Gaps = 1/128 (0%)

Query: 1   MDIPLATLNYTSELLQDQQARTVADAV-LNDASIRMLTSTGGFGETYQIRGYGLTSGDVG 59
           MD P +  +YT+  ++ QQAR+VAD +  ND S+R++   G   ++Y IRG+ + + DV 
Sbjct: 163 MDAPFSITSYTARTIEQQQARSVADLLQANDPSVRVVGGRGDLVDSYTIRGFSVQNADVA 222

Query: 60  VNGLFGLASGNRMPAVMIERVDVLKGPGTLLHGISPEGSIGGSINLMTKRAEDEPLTRLT 119
            NGL+GL    R+P    ERV+VLKGP  LL GISP GS+GG+INL+ KRA+D+PLTR++
Sbjct: 223 FNGLYGLLPFWRVPIEFAERVEVLKGPNALLGGISPGGSVGGTINLVPKRADDQPLTRVS 282

Query: 120 ALYQSRRQ 127
             +  R Q
Sbjct: 283 VDWTQRGQ 290


>CC2928 Non COG
          Length = 721

 Score =  113 bits (283), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 57/130 (43%), Positives = 81/130 (62%), Gaps = 1/130 (0%)

Query: 1   MDIPLATLNYTSELLQDQQARTVADAVLNDASIRMLTSTGGFGETYQIRGYGLTSGDVGV 60
           MD P A  +YT  L+++QQAR+VAD + ND ++R+    G F E Y +RG+ + S D+  
Sbjct: 68  MDTPFAVTSYTEALIRNQQARSVADVLQNDPTVRVTKGFGNFQELYVVRGFPVYSDDMTY 127

Query: 61  NGLFGLASGNRMPAVMIERVDVLKGPGTLLHGISPEGS-IGGSINLMTKRAEDEPLTRLT 119
           NGL+G+     + A +IERVDV +G    L+G +P GS +GG+ NLM KRA   PLTR T
Sbjct: 128 NGLYGVLPRQFVAAELIERVDVFRGANAFLNGAAPGGSGVGGAFNLMPKRAPTAPLTRFT 187

Query: 120 ALYQSRRQXF 129
           A +    Q +
Sbjct: 188 AGWDGGEQVY 197


>YPO1753 [P] COG1629 Outer membrane receptor proteins, mostly Fe transport
           Ype Yersinia pestis
          Length = 758

 Score =  113 bits (282), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 57/127 (44%), Positives = 80/127 (62%), Gaps = 1/127 (0%)

Query: 2   DIPLATLNYTSELLQDQQARTVADAVLNDASIRMLTSTGGFGETYQIRGYGLTSGDVGVN 61
           ++P   + YTS++++DQQA T+AD V NDAS++ +   G   + Y+IRG+ L   D+   
Sbjct: 105 NVPFNIIGYTSKMIEDQQAATIADVVKNDASVQNVRGYGNPSQNYRIRGFNLDGDDISFG 164

Query: 62  GLFGLASGNRMPAVMIERVDVLKGPGTLLHGISPEGS-IGGSINLMTKRAEDEPLTRLTA 120
           GLFG+     +   M+ERV+V KG    ++GISP GS +GG INL  KRA D PLTR+T 
Sbjct: 165 GLFGVLPRQIVSTSMVERVEVFKGANAFINGISPSGSGVGGMINLEPKRAGDTPLTRVTV 224

Query: 121 LYQSRRQ 127
            Y S  Q
Sbjct: 225 DYGSAAQ 231


>RSp0414 [P] COG1629 Outer membrane receptor proteins, mostly Fe transport
           Rso Ralstonia solanacearum
          Length = 746

 Score =  101 bits (251), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 51/130 (39%), Positives = 78/130 (60%), Gaps = 3/130 (2%)

Query: 1   MDIPLATLNYTSELLQDQQARTVADAVLNDASIRMLTSTGGFGETYQIRGYGLTSG---D 57
           MD P +    T+  ++DQQA T+AD +  DAS+R    TGG  +++ IRG+ +  G   +
Sbjct: 103 MDTPFSVSTTTARRMEDQQATTLADVLNKDASVRFTGQTGGVTDSFYIRGFPVGEGNLSE 162

Query: 58  VGVNGLFGLASGNRMPAVMIERVDVLKGPGTLLHGISPEGSIGGSINLMTKRAEDEPLTR 117
           V  +G++G+A    +    +ERV+V+KGP  LL+G+SP   +GG +N+  KRA  + LT 
Sbjct: 163 VAFDGVYGVAPNYHVFPEYVERVEVIKGPAALLYGMSPNSGVGGVVNIAPKRALPQDLTH 222

Query: 118 LTALYQSRRQ 127
            TA Y S  Q
Sbjct: 223 FTATYASDLQ 232


>NMA1558 [P] COG1629 Outer membrane receptor proteins, mostly Fe transport
           NmA Neisseria meningitidis Z2491
          Length = 706

 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 59/111 (53%), Gaps = 1/111 (0%)

Query: 4   PLATLNYTSELLQDQQARTVADAVLN-DASIRMLTSTGGFGETYQIRGYGLTSGDVGVNG 62
           P+  +NY  + L + +ART+ DAV   DAS+               RGY L S    VNG
Sbjct: 10  PITVVNYDEQALNNTEARTLVDAVAKKDASVWQFGGESNTLTGLYFRGYQLDSRQFSVNG 69

Query: 63  LFGLASGNRMPAVMIERVDVLKGPGTLLHGISPEGSIGGSINLMTKRAEDE 113
           L G+       +V +    ++KG  T ++G+ PEG++ GS+N+ TK+A DE
Sbjct: 70  LAGMYGTQGTASVQVGSAQLIKGASTAVNGMDPEGAVSGSVNIETKKAADE 120