BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0044.0030.p         (127 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BS_yodA Non COG                                                       108   3e-24
BS_yusQ Non COG                                                       101   5e-22
BS_yrdN Non COG                                                        95   5e-20

>BS_yodA Non COG
          Length = 129

 Score =  108 bits (270), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 50/126 (39%), Positives = 78/126 (61%), Gaps = 1/126 (0%)

Query: 1   MPLVRISLLRGKSRAYRNAIAENVYQALRERFNVPEDDRFMVITEHDPEELIFSRSYMGM 60
           MPL+R  ++ G+       + +  +QA+ E F VPE DR+ ++ +H   ELI   + +G 
Sbjct: 1   MPLLRFDVIEGRDEKSLQLLLDTAHQAMVEAFGVPERDRYQIVHQHPANELIIQDAGLGF 60

Query: 61  ARTDDFVLIQLTVSNTRTQAQKNALYARIVERLQQDPGIAPDDVMISLVEGDKGNWSFGQ 120
            RT D V+I +T S  RT++QK  LYA + ERL++   I+PDD+M+S+ E    +WSFG 
Sbjct: 61  QRTKDMVIISMT-SKARTESQKEKLYALLAERLEKKCEISPDDLMVSITENGDADWSFGL 119

Query: 121 GLAQYV 126
           G AQ++
Sbjct: 120 GEAQFL 125


>BS_yusQ Non COG
          Length = 127

 Score =  101 bits (251), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 71/126 (56%)

Query: 1   MPLVRISLLRGKSRAYRNAIAENVYQALRERFNVPEDDRFMVITEHDPEELIFSRSYMGM 60
           MP V+I L  G+S  +   ++  ++Q++ E  NVPEDD F VI +++  E  +   Y+ +
Sbjct: 1   MPFVQIHLRSGRSEVWLQKLSRTIHQSMIEEINVPEDDYFQVIRQYEKSEFFYDPFYLQV 60

Query: 61  ARTDDFVLIQLTVSNTRTQAQKNALYARIVERLQQDPGIAPDDVMISLVEGDKGNWSFGQ 120
            RTD+ + I  T+  +RT  QK ALY  I  R+  + G+  +DV I L      +WSFG 
Sbjct: 61  ERTDELIYIHFTLKQSRTTEQKKALYRSIASRIHSELGVRKEDVFIMLAGNQDEDWSFGN 120

Query: 121 GLAQYV 126
           G AQ +
Sbjct: 121 GRAQMI 126


>BS_yrdN Non COG
          Length = 129

 Score = 94.7 bits (234), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 76/126 (60%), Gaps = 1/126 (0%)

Query: 1   MPLVRISLLRGKSRAYRNAIAENVYQALRERFNVPEDDRFMVITEHDPEELIFSRSYMGM 60
           MPL+R  L+ G+ ++    + +  +  + E F+VP+ DR+ ++ EH    +I   + +G 
Sbjct: 1   MPLLRFDLIEGRDQSSLKKLLDVAHNVVVEAFDVPQQDRYQIVHEHPENHMIIEDTGLGF 60

Query: 61  ARTDDFVLIQLTVSNTRTQAQKNALYARIVERLQQDPGIAPDDVMISLVEGDKGNWSFGQ 120
            RT + V++ +T S +R + +K   Y  + ERL+ + GIA  D+++S+VE D  +WSFG 
Sbjct: 61  NRTKNLVVLSVT-SKSRPEEKKQKFYRLLAERLESECGIASTDLIVSIVENDNADWSFGL 119

Query: 121 GLAQYV 126
           G AQ++
Sbjct: 120 GEAQFL 125