BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0044.0007.p         (74 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc2352 [GEPR] COG0477 Permeases of the major facilitator superf...   101   5e-22
YPO2237 [GEPR] COG0477 Permeases of the major facilitator superf...   100   1e-21
RSp1572 [GEPR] COG0477 Permeases of the major facilitator superf...    98   4e-21
Cj0484 [GEPR] COG0477 Permeases of the major facilitator superfa...    92   2e-19
RSp0182 [GEPR] COG0477 Permeases of the major facilitator superf...    92   3e-19

>RSc2352 [GEPR] COG0477 Permeases of the major facilitator superfamily Rso
           Ralstonia solanacearum
          Length = 442

 Score =  101 bits (251), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 58/69 (84%)

Query: 1   LGAGIFFIGYFIFEVPSNLLLEKIGARKTLARITILWGLASMAMAYVTTPTSFYILRFLL 60
           LGAGIFFIGYF+FEVPSN++L ++GAR  +ARI I WGL S AM +VTTP  FY++RFLL
Sbjct: 73  LGAGIFFIGYFLFEVPSNVILHRVGARMWIARIMISWGLISAAMMFVTTPAMFYVMRFLL 132

Query: 61  GIFEAGFFP 69
           G+ EAGFFP
Sbjct: 133 GLAEAGFFP 141


>YPO2237 [GEPR] COG0477 Permeases of the major facilitator superfamily Ype
           Yersinia pestis
          Length = 436

 Score = 99.8 bits (247), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 46/69 (66%), Positives = 57/69 (82%)

Query: 1   LGAGIFFIGYFIFEVPSNLLLEKIGARKTLARITILWGLASMAMAYVTTPTSFYILRFLL 60
           LGAG+FFIGYF  E+PSNL+L ++GAR  +ARI I WG+ S  MA+VTTP SFY++RFLL
Sbjct: 67  LGAGMFFIGYFFLEIPSNLILHRVGARLWIARIMITWGIISACMAFVTTPMSFYVMRFLL 126

Query: 61  GIFEAGFFP 69
           G+ EAGFFP
Sbjct: 127 GVAEAGFFP 135


>RSp1572 [GEPR] COG0477 Permeases of the major facilitator superfamily Rso
           Ralstonia solanacearum
          Length = 433

 Score = 98.2 bits (243), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 49/69 (71%), Positives = 57/69 (82%)

Query: 1   LGAGIFFIGYFIFEVPSNLLLEKIGARKTLARITILWGLASMAMAYVTTPTSFYILRFLL 60
           LGAGIFF GY +FEVPSNLLL KIGAR+TL+RI ILWG+ S +M +VT   +FY LRFLL
Sbjct: 65  LGAGIFFFGYMLFEVPSNLLLVKIGARRTLSRILILWGIVSASMLFVTDVWTFYALRFLL 124

Query: 61  GIFEAGFFP 69
           G+FEAGF P
Sbjct: 125 GVFEAGFAP 133


>Cj0484 [GEPR] COG0477 Permeases of the major facilitator superfamily Cje
           Campylobacter jejuni
          Length = 410

 Score = 92.4 bits (228), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 46/69 (66%), Positives = 54/69 (78%)

Query: 1   LGAGIFFIGYFIFEVPSNLLLEKIGARKTLARITILWGLASMAMAYVTTPTSFYILRFLL 60
           LGAGIFFIGY IFEVPSNL L K+GA+  L+RI I WGL +MAM ++    SFY+LRFLL
Sbjct: 58  LGAGIFFIGYAIFEVPSNLFLHKLGAKIWLSRIMITWGLVTMAMIFIQGEISFYVLRFLL 117

Query: 61  GIFEAGFFP 69
           G+ EAGF P
Sbjct: 118 GLTEAGFSP 126


>RSp0182 [GEPR] COG0477 Permeases of the major facilitator superfamily Rso
           Ralstonia solanacearum
          Length = 453

 Score = 92.0 bits (227), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 42/67 (62%), Positives = 53/67 (79%)

Query: 3   AGIFFIGYFIFEVPSNLLLEKIGARKTLARITILWGLASMAMAYVTTPTSFYILRFLLGI 62
           +GIFFIGYF+FEVPSNL+L + GAR+ +ARI + WGL +M  A+V + T  Y LRFLLG+
Sbjct: 77  SGIFFIGYFLFEVPSNLMLNRFGARRWIARILVTWGLVAMGSAFVQSATQLYALRFLLGV 136

Query: 63  FEAGFFP 69
            EAGFFP
Sbjct: 137 AEAGFFP 143