BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0044.0002.p (143 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1379 [R] COG1123 ATPase components of various ABC-type transp... 234 5e-62 STM0848 [R] COG1123 ATPase components of various ABC-type transp... 208 3e-54 Z1053 [R] COG1123 ATPase components of various ABC-type transpor... 205 3e-53 ECs0908 [R] COG1123 ATPase components of various ABC-type transp... 205 3e-53 yliA [R] COG1123 ATPase components of various ABC-type transport... 205 3e-53 >RSc1379 [R] COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase Rso Ralstonia solanacearum Length = 627 Score = 234 bits (597), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 114/143 (79%), Positives = 127/143 (88%) Query: 1 LALNPKIVIADESVSALDVSIQAQIVNLMLDLQAELGISFIFISHDMAVVERISHRVAVM 60 LALNPK+VIADESVSALDVSIQAQIVNLMLDLQ E GI+F+FISHDMAVVERISHRVAVM Sbjct: 485 LALNPKVVIADESVSALDVSIQAQIVNLMLDLQKEFGIAFLFISHDMAVVERISHRVAVM 544 Query: 61 YLGQIVEIGPRRAIFENPQHPYTRKLMAAVPVADPTLRQPGKKLLTDEIPSPIRRVGDEP 120 YLGQIVEIGPRRAIFENPQHPYT+KLM+AVP+ADP R ++L T EIPSPIR +GD P Sbjct: 545 YLGQIVEIGPRRAIFENPQHPYTKKLMSAVPIADPARRHLKRELSTHEIPSPIRAIGDMP 604 Query: 121 KVEPLQEVAPGHFVAQHRIAGAF 143 V PL++VAP HFVA+H I GA+ Sbjct: 605 VVRPLEQVAPDHFVARHAIGGAY 627 Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 53/123 (43%), Positives = 73/123 (59%), Gaps = 11/123 (8%) Query: 1 LALNPKIVIADESVSALDVSIQAQIVNLMLDLQAELGISFIFISHDMAVVERISHRVAVM 60 L+ P ++IADE +ALDV+IQA+I+ L+ LQ E+ ++ +FI+HDM VV ++ RV VM Sbjct: 189 LSCRPSLLIADEPTTALDVTIQAEILQLIRALQQEMRMAVVFITHDMGVVAEVADRVLVM 248 Query: 61 YLGQIVEIGPRRAIFENPQHPYTRKLMAAVPVAD-----------PTLRQPGKKLLTDEI 109 Y G+ VE GP +F P HPYTR L++AVP P +R G L D Sbjct: 249 YKGERVEAGPSAEVFAQPAHPYTRALLSAVPQLGAMAGTDGPARFPLVRVDGTGLPIDTT 308 Query: 110 PSP 112 P P Sbjct: 309 PQP 311 >STM0848 [R] COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase Sty Salmonella typhimurium LT2 Length = 623 Score = 208 bits (530), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 98/136 (72%), Positives = 120/136 (88%) Query: 1 LALNPKIVIADESVSALDVSIQAQIVNLMLDLQAELGISFIFISHDMAVVERISHRVAVM 60 LALNPK++IADE+VSALDVS++ QI+NL+LDLQ E+GI+++FISHDMAVVERISHRVAVM Sbjct: 478 LALNPKVIIADEAVSALDVSVRGQIINLLLDLQREMGIAYLFISHDMAVVERISHRVAVM 537 Query: 61 YLGQIVEIGPRRAIFENPQHPYTRKLMAAVPVADPTLRQPGKKLLTDEIPSPIRRVGDEP 120 YLGQIVE+GPRRA+FENPQHPYTRKLMAAVPVADP+ +P + LL+D+IPS I + G+E Sbjct: 538 YLGQIVEMGPRRAVFENPQHPYTRKLMAAVPVADPSRHRPRRVLLSDDIPSNIHKRGEET 597 Query: 121 KVEPLQEVAPGHFVAQ 136 LQ V PGH+VA+ Sbjct: 598 PAVSLQLVGPGHYVAR 613 Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 49/91 (53%), Positives = 63/91 (69%) Query: 1 LALNPKIVIADESVSALDVSIQAQIVNLMLDLQAELGISFIFISHDMAVVERISHRVAVM 60 L+ P ++IADE +ALDV+IQAQI+ L+ LQ E+ + IFI+HDM VV I+ RV VM Sbjct: 183 LSCRPAVLIADEPTTALDVTIQAQILQLIKVLQQEMSMGVIFITHDMGVVADIADRVLVM 242 Query: 61 YLGQIVEIGPRRAIFENPQHPYTRKLMAAVP 91 Y G+ VE G IF P HPYT+ L+AAVP Sbjct: 243 YQGEAVETGSVEQIFHAPTHPYTQTLLAAVP 273 >Z1053 [R] COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase EcZ Escherichia coli O157:H7 EDL933 Length = 612 Score = 205 bits (521), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 99/143 (69%), Positives = 122/143 (85%) Query: 1 LALNPKIVIADESVSALDVSIQAQIVNLMLDLQAELGISFIFISHDMAVVERISHRVAVM 60 LALNPK++IADE+VSALDVSI+ QI+NL+LDLQ + GI+++FISHDMAVVERISHRVAVM Sbjct: 467 LALNPKVIIADEAVSALDVSIRGQIINLLLDLQRDFGIAYLFISHDMAVVERISHRVAVM 526 Query: 61 YLGQIVEIGPRRAIFENPQHPYTRKLMAAVPVADPTLRQPGKKLLTDEIPSPIRRVGDEP 120 YLGQIVEIGPRRA+FENPQHPYTRKL+AAVPVA+P+ ++P + LL+D++PS I G+E Sbjct: 527 YLGQIVEIGPRRAVFENPQHPYTRKLLAAVPVAEPSRQRPQRVLLSDDLPSNIHLRGEEV 586 Query: 121 KVEPLQEVAPGHFVAQHRIAGAF 143 LQ V PGH+VAQ + AF Sbjct: 587 AAVSLQCVGPGHYVAQPQSEYAF 609 Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 51/91 (56%), Positives = 64/91 (70%) Query: 1 LALNPKIVIADESVSALDVSIQAQIVNLMLDLQAELGISFIFISHDMAVVERISHRVAVM 60 L+ P ++IADE +ALDV+IQAQI+ L+ LQ E+ + IFI+HDM VV I+ RV VM Sbjct: 172 LSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEMSMGVIFITHDMGVVAEIADRVLVM 231 Query: 61 YLGQIVEIGPRRAIFENPQHPYTRKLMAAVP 91 Y G+ VE G IF PQHPYTR L+AAVP Sbjct: 232 YQGEAVETGTVEQIFHAPQHPYTRALLAAVP 262 >ECs0908 [R] COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase Ecs Escherichia coli O157:H7 Length = 612 Score = 205 bits (521), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 99/143 (69%), Positives = 122/143 (85%) Query: 1 LALNPKIVIADESVSALDVSIQAQIVNLMLDLQAELGISFIFISHDMAVVERISHRVAVM 60 LALNPK++IADE+VSALDVSI+ QI+NL+LDLQ + GI+++FISHDMAVVERISHRVAVM Sbjct: 467 LALNPKVIIADEAVSALDVSIRGQIINLLLDLQRDFGIAYLFISHDMAVVERISHRVAVM 526 Query: 61 YLGQIVEIGPRRAIFENPQHPYTRKLMAAVPVADPTLRQPGKKLLTDEIPSPIRRVGDEP 120 YLGQIVEIGPRRA+FENPQHPYTRKL+AAVPVA+P+ ++P + LL+D++PS I G+E Sbjct: 527 YLGQIVEIGPRRAVFENPQHPYTRKLLAAVPVAEPSRQRPQRVLLSDDLPSNIHLRGEEV 586 Query: 121 KVEPLQEVAPGHFVAQHRIAGAF 143 LQ V PGH+VAQ + AF Sbjct: 587 AAVSLQCVGPGHYVAQPQSEYAF 609 Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 51/91 (56%), Positives = 64/91 (70%) Query: 1 LALNPKIVIADESVSALDVSIQAQIVNLMLDLQAELGISFIFISHDMAVVERISHRVAVM 60 L+ P ++IADE +ALDV+IQAQI+ L+ LQ E+ + IFI+HDM VV I+ RV VM Sbjct: 172 LSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEMSMGVIFITHDMGVVAEIADRVLVM 231 Query: 61 YLGQIVEIGPRRAIFENPQHPYTRKLMAAVP 91 Y G+ VE G IF PQHPYTR L+AAVP Sbjct: 232 YQGEAVETGTVEQIFHAPQHPYTRALLAAVP 262 >yliA [R] COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase Eco Escherichia coli K12 Length = 612 Score = 205 bits (521), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 99/143 (69%), Positives = 122/143 (85%) Query: 1 LALNPKIVIADESVSALDVSIQAQIVNLMLDLQAELGISFIFISHDMAVVERISHRVAVM 60 LALNPK++IADE+VSALDVSI+ QI+NL+LDLQ + GI+++FISHDMAVVERISHRVAVM Sbjct: 467 LALNPKVIIADEAVSALDVSIRGQIINLLLDLQRDFGIAYLFISHDMAVVERISHRVAVM 526 Query: 61 YLGQIVEIGPRRAIFENPQHPYTRKLMAAVPVADPTLRQPGKKLLTDEIPSPIRRVGDEP 120 YLGQIVEIGPRRA+FENPQHPYTRKL+AAVPVA+P+ ++P + LL+D++PS I G+E Sbjct: 527 YLGQIVEIGPRRAVFENPQHPYTRKLLAAVPVAEPSRQRPQRVLLSDDLPSNIHLRGEEV 586 Query: 121 KVEPLQEVAPGHFVAQHRIAGAF 143 LQ V PGH+VAQ + AF Sbjct: 587 AAVSLQCVGPGHYVAQPQSEYAF 609 Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 51/91 (56%), Positives = 64/91 (70%) Query: 1 LALNPKIVIADESVSALDVSIQAQIVNLMLDLQAELGISFIFISHDMAVVERISHRVAVM 60 L+ P ++IADE +ALDV+IQAQI+ L+ LQ E+ + IFI+HDM VV I+ RV VM Sbjct: 172 LSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEMSMGVIFITHDMGVVAEIADRVLVM 231 Query: 61 YLGQIVEIGPRRAIFENPQHPYTRKLMAAVP 91 Y G+ VE G IF PQHPYTR L+AAVP Sbjct: 232 YQGEAVETGTVEQIFHAPQHPYTRALLAAVP 262