BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0043.0024.p         (125 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSp1271 [P] COG1629 Outer membrane receptor proteins, mostly Fe ...    91   9e-19

>RSp1271 [P] COG1629 Outer membrane receptor proteins, mostly Fe transport
           Rso Ralstonia solanacearum
          Length = 779

 Score = 90.5 bits (223), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 45/103 (43%), Positives = 60/103 (58%)

Query: 21  VGQRTPYVPEWRATLVASYQPDEHWTYTLAGRYSARVYATVDNTDINTHTYQGFDGYTVF 80
           VG+  P +P  RA L AS+     WT     RYS R Y T+DNTD+    Y G   +   
Sbjct: 675 VGKVWPRMPRVRANLFASWHASAGWTLGAGLRYSGRQYGTLDNTDVLPDVYGGTSRFFTV 734

Query: 81  DARLRYRFDRHWSAALGVDNLGNRSYFLFHPFPQRTVLAELKY 123
           D +  YR D+H + ALGVDNL +R YF++HP+P RT   +LK+
Sbjct: 735 DLKAGYRVDKHVTLALGVDNLTDRRYFVYHPYPSRTFYGQLKW 777