BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0043.0020.p         (113 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CC3255 Non COG                                                        123   9e-29
SMb20529 [S] COG3220 Uncharacterized protein conserved in bacter...   107   8e-24
CC2906 Non COG                                                        107   8e-24
RSp1035 [S] COG3220 Uncharacterized protein conserved in bacteri...    89   2e-18
PM0211 [S] COG3220 Uncharacterized protein conserved in bacteria...    84   5e-17

>CC3255 Non COG
          Length = 280

 Score =  123 bits (309), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 62/109 (56%), Positives = 75/109 (68%)

Query: 3   LAQLAARIEPVLVSEHLAWSRAGGHYLPDLLPVPRTTETLARLAANISRTQDGLKRRIAL 62
           L +L  R +P +VSEHLAWS   G + PDLLP PRT   L R+  N++R QD L+RR+ +
Sbjct: 77  LKRLVDRFDPFVVSEHLAWSTHRGAHHPDLLPFPRTRAALDRICGNVARMQDALQRRVLI 136

Query: 63  ENPSHYLRMDQHSWSEPEFLHELARRTGCGLLVDVNNVHVSACNLGIDP 111
           ENPS YL +  H+  E +FL  LA RTGCGLLVDVNNV VSA NLG  P
Sbjct: 137 ENPSLYLPLKGHALDEVDFLEALATRTGCGLLVDVNNVFVSAQNLGYAP 185


>SMb20529 [S] COG3220 Uncharacterized protein conserved in bacteria Sme
           Sinorhizobium meliloti
          Length = 309

 Score =  107 bits (266), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 55/107 (51%), Positives = 68/107 (63%)

Query: 3   LAQLAARIEPVLVSEHLAWSRAGGHYLPDLLPVPRTTETLARLAANISRTQDGLKRRIAL 62
            A L  R EP LVSEHLAWS     Y  DLLP+P T  +L R+A +I+  Q+ + R + L
Sbjct: 100 FAALVKRYEPALVSEHLAWSTHDTTYYNDLLPLPYTEASLQRVAEHINEVQEVIGRPLLL 159

Query: 63  ENPSHYLRMDQHSWSEPEFLHELARRTGCGLLVDVNNVHVSACNLGI 109
           ENPS YL   + + SE  F+  L RRTGCGLL+D+NNV VSA N G 
Sbjct: 160 ENPSSYLLFKESTMSETAFIRGLVRRTGCGLLLDINNVFVSATNHGF 206


>CC2906 Non COG
          Length = 289

 Score =  107 bits (266), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 53/109 (48%), Positives = 72/109 (66%)

Query: 3   LAQLAARIEPVLVSEHLAWSRAGGHYLPDLLPVPRTTETLARLAANISRTQDGLKRRIAL 62
           L  LA R++P+ VS+HL W+   G    DLLPVP T E +A + ANI+  QD L+R + L
Sbjct: 91  LKGLADRVDPMWVSDHLCWTGVEGFNSHDLLPVPYTEEAMAVVCANIALAQDVLERPLLL 150

Query: 63  ENPSHYLRMDQHSWSEPEFLHELARRTGCGLLVDVNNVHVSACNLGIDP 111
           ENPS Y+     + +E +FL E+  RTGC LL+D+NN++VSA N G DP
Sbjct: 151 ENPSSYVTFANDAMAEHQFLAEMCARTGCYLLLDINNIYVSASNHGFDP 199


>RSp1035 [S] COG3220 Uncharacterized protein conserved in bacteria Rso
           Ralstonia solanacearum
          Length = 285

 Score = 89.0 bits (219), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 47/105 (44%), Positives = 69/105 (65%), Gaps = 5/105 (4%)

Query: 10  IEPVLVSEHLAWSRAGGHYLPDLLPVPRTTETLARLAANISRTQDGLKRRIALENPSHYL 69
           +EP  VSEHL ++R+G   + DLLP+P   E+L  +AANI R QD LKR + +EN + Y+
Sbjct: 83  VEPAAVSEHLCFNRSGARVVNDLLPLPYARESLDLVAANIGRAQDILKRPLLIENIATYI 142

Query: 70  RM-----DQHSWSEPEFLHELARRTGCGLLVDVNNVHVSACNLGI 109
                   + +  E  FL  LARRTGCG+L+D+NN++V++ N G+
Sbjct: 143 DCRALVDPREAIPEGAFLTALARRTGCGILLDLNNLYVNSINHGV 187


>PM0211 [S] COG3220 Uncharacterized protein conserved in bacteria Pmu
           Pasteurella multocida
          Length = 307

 Score = 84.3 bits (207), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 43/107 (40%), Positives = 64/107 (59%), Gaps = 1/107 (0%)

Query: 6   LAARIEPVLVSEHLAWSRAGGHYLPDLLPVPRTTETLARLAANISRTQDGLKRRIALENP 65
           L  + + V  SEHL++    GH L DLLP+P T E +  +A  I   QD L  +I+LEN 
Sbjct: 83  LMTQYQAVFFSEHLSYCECDGH-LYDLLPMPFTEEAVKHVAQRIREVQDFLGMQISLENT 141

Query: 66  SHYLRMDQHSWSEPEFLHELARRTGCGLLVDVNNVHVSACNLGIDPP 112
           S+YL     + +E EFL+ +A+   CG+ +DVNN++V+  N G+  P
Sbjct: 142 SYYLHSPTSTMNEVEFLNAIAQEANCGIHLDVNNIYVNGVNHGLLNP 188