BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0042.0338.p (289 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA4861 [R] COG4674 Uncharacterized ABC-type transport system, AT... 347 2e-95 YPO1190 [R] COG4674 Uncharacterized ABC-type transport system, A... 333 2e-91 RSc2038 [R] COG4674 Uncharacterized ABC-type transport system, A... 319 4e-87 AGc4375 [R] COG4674 Uncharacterized ABC-type transport system, A... 306 3e-83 SMb20602 [R] COG4674 Uncharacterized ABC-type transport system, ... 302 4e-82 >PA4861 [R] COG4674 Uncharacterized ABC-type transport system, ATPase component Pae Pseudomonas aeruginosa Length = 285 Score = 347 bits (889), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 176/251 (70%), Positives = 203/251 (80%), Gaps = 2/251 (0%) Query: 39 VDTTHGAILYLENITVSFDGFKAINNLNLDISVGELRCIIGPNGAGKTTMMDVITGKTRP 98 +D HG IL LE+I VSFDGFKA+ +L L I VGELRCIIGPNGAGKTT+MDVITGKTRP Sbjct: 37 LDARHGTILSLEDINVSFDGFKALRDLTLYIGVGELRCIIGPNGAGKTTLMDVITGKTRP 96 Query: 99 TSGTAFFGQTIDLTKMTEYEIAHAGIGRKFQRPTVFEQHTVFENLELAMKMDKRVKTTLF 158 SGTA+FG T+DLT+M+E +IA AGIGRKFQ+PTVFE +VFENLELA + DK V +L Sbjct: 97 QSGTAYFGDTLDLTRMSEVQIAQAGIGRKFQKPTVFEALSVFENLELAQRADKSVWASLR 156 Query: 159 ARLSSEQIGKIEEILKLIRLNGQEQRVAGLLSHGQKQWLEIGMLLMQEPQLLLLDEPVAG 218 ARL Q +IEE+L IRL QR AGLLSHGQKQ+LEIGMLL+QEPQLLLLDEPVAG Sbjct: 157 ARLDGTQRERIEEVLATIRLLESRQRPAGLLSHGQKQFLEIGMLLVQEPQLLLLDEPVAG 216 Query: 219 MSDAETARTAELLNELRGKHSIMVVEHDMGFVEEIAQGGKVTVLHEGSVLAEGNMRQVQS 278 M+DAET TAEL L KHS+MVVEHDMGFV IA VTVLH+G VLAEG++ +VQ+ Sbjct: 217 MTDAETEFTAELFKSLARKHSLMVVEHDMGFVGSIAD--HVTVLHQGHVLAEGSLAEVQA 274 Query: 279 NERVIEVYLGR 289 +E+VIEVYLGR Sbjct: 275 DEQVIEVYLGR 285 >YPO1190 [R] COG4674 Uncharacterized ABC-type transport system, ATPase component Ype Yersinia pestis Length = 278 Score = 333 bits (855), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 167/244 (68%), Positives = 197/244 (80%), Gaps = 2/244 (0%) Query: 46 ILYLENITVSFDGFKAINNLNLDISVGELRCIIGPNGAGKTTMMDVITGKTRPTSGTAFF 105 +L LENI VSFDGF A+ NL+L I VGELRCIIGPNGAGKTT+MDVITGKTRP +G + Sbjct: 37 VLTLENINVSFDGFHALRNLSLQIGVGELRCIIGPNGAGKTTLMDVITGKTRPQTGKMVY 96 Query: 106 GQTIDLTKMTEYEIAHAGIGRKFQRPTVFEQHTVFENLELAMKMDKRVKTTLFARLSSEQ 165 Q DL+ M EIAHAGIGRKFQ+PTVFE +VFENLELA K K V +L A+L+SEQ Sbjct: 97 DQHHDLSTMNTIEIAHAGIGRKFQKPTVFEALSVFENLELAQKNHKTVWASLCAKLNSEQ 156 Query: 166 IGKIEEILKLIRLNGQEQRVAGLLSHGQKQWLEIGMLLMQEPQLLLLDEPVAGMSDAETA 225 +I+E L ++RL+ QR AGLLSHGQKQ+LEIGMLL+Q+P LLLLDEP AGM+DAETA Sbjct: 157 RDQIDETLAILRLSDLRQRQAGLLSHGQKQFLEIGMLLVQDPHLLLLDEPAAGMTDAETA 216 Query: 226 RTAELLNELRGKHSIMVVEHDMGFVEEIAQGGKVTVLHEGSVLAEGNMRQVQSNERVIEV 285 TAEL N+L GKHS+MVVEHDMGF+E IA VTVLH+G VLAEG++ +VQ N++VIEV Sbjct: 217 YTAELFNQLAGKHSLMVVEHDMGFIETIA--DHVTVLHQGQVLAEGSLAEVQENDQVIEV 274 Query: 286 YLGR 289 YLGR Sbjct: 275 YLGR 278 >RSc2038 [R] COG4674 Uncharacterized ABC-type transport system, ATPase component Rso Ralstonia solanacearum Length = 287 Score = 319 bits (818), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 166/261 (63%), Positives = 196/261 (75%), Gaps = 5/261 (1%) Query: 34 IKPEGVDTTHGAILYLENITVSFDGFKAINNLNLDISVGELRCIIGPNGAGKTTMMDVIT 93 ++P+ +D +HG ILYLE++TV F GF+A+N L L I GELRC+IGPNGAGKTTMMDVIT Sbjct: 27 LEPDAIDVSHGPILYLEDVTVRFGGFRALNALTLSIDHGELRCVIGPNGAGKTTMMDVIT 86 Query: 94 GKTRP----TSGTAFFGQTIDLTKMTEYEIAHAGIGRKFQRPTVFEQHTVFENLELAMKM 149 GKT P +G + GQ IDL ++TE IA GIGRKFQ+PTVFEQH V+ENLELAM+ Sbjct: 87 GKTGPRNADVAGRVYLGQAIDLLRLTEPRIAQIGIGRKFQKPTVFEQHGVWENLELAMQA 146 Query: 150 DKRVKTTLFARLSSEQIGKIEEILKLIRLNGQEQRVAGLLSHGQKQWLEIGMLLMQEPQL 209 DKR +L ARL + +IEE L I L + R AGLLSHGQKQ LEIGMLLMQ PQL Sbjct: 147 DKRWWVSLRARLLDDGRRRIEETLGRIGLEAEAYRSAGLLSHGQKQRLEIGMLLMQRPQL 206 Query: 210 LLLDEPVAGMSDAETARTAELLNELRGKHSIMVVEHDMGFVEEIA-QGGKVTVLHEGSVL 268 LLLDEPVAGM+D ET + A+LLN LRG SIMVVEHDM FV +A + G+VTVL EGSVL Sbjct: 207 LLLDEPVAGMTDEETMQLADLLNGLRGACSIMVVEHDMEFVAALAGETGRVTVLAEGSVL 266 Query: 269 AEGNMRQVQSNERVIEVYLGR 289 AEG + V+ + RVIE YLGR Sbjct: 267 AEGTLDAVKRDARVIESYLGR 287 >AGc4375 [R] COG4674 Uncharacterized ABC-type transport system, ATPase component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 281 Score = 306 bits (784), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 153/245 (62%), Positives = 188/245 (76%), Gaps = 2/245 (0%) Query: 45 AILYLENITVSFDGFKAINNLNLDISVGELRCIIGPNGAGKTTMMDVITGKTRPTSGTAF 104 ++LYL+ ++VSFDGFKA+N+L+ + GELR IIGPNGAGKTTMMD+ITGKTRP +GT Sbjct: 39 SLLYLDGVSVSFDGFKALNSLSFVVEPGELRAIIGPNGAGKTTMMDIITGKTRPDTGTVL 98 Query: 105 FGQTIDLTKMTEYEIAHAGIGRKFQRPTVFEQHTVFENLELAMKMDKRVKTTLFARLSSE 164 F +IDLTK E +IA GIGRKFQ+PTVFE HTV++NLELA+ + V TLF RL+ E Sbjct: 99 FEDSIDLTKKDEADIAQLGIGRKFQKPTVFESHTVWDNLELALNRKRGVFATLFYRLTEE 158 Query: 165 QIGKIEEILKLIRLNGQEQRVAGLLSHGQKQWLEIGMLLMQEPQLLLLDEPVAGMSDAET 224 +IEEIL +RL + +A LSHGQKQWLEIGMLL QEP+LLL+DEPVAGM+DAET Sbjct: 159 DKARIEEILATVRLGHRRGDLAANLSHGQKQWLEIGMLLAQEPKLLLVDEPVAGMTDAET 218 Query: 225 ARTAELLNELRGKHSIMVVEHDMGFVEEIAQGGKVTVLHEGSVLAEGNMRQVQSNERVIE 284 A T LL E+ S++VVEHDMGF+ E+ G KVT L EGSVLAEG++ V S+ +VIE Sbjct: 219 AETTVLLKEIAKTRSVVVVEHDMGFIREL--GVKVTCLAEGSVLAEGSIDFVSSDPKVIE 276 Query: 285 VYLGR 289 YLGR Sbjct: 277 NYLGR 281 >SMb20602 [R] COG4674 Uncharacterized ABC-type transport system, ATPase component Sme Sinorhizobium meliloti Length = 250 Score = 302 bits (774), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 152/244 (62%), Positives = 185/244 (75%), Gaps = 2/244 (0%) Query: 46 ILYLENITVSFDGFKAINNLNLDISVGELRCIIGPNGAGKTTMMDVITGKTRPTSGTAFF 105 +LYL+ ++VSFDGFKA+N+L+ + GELR IIGPNGAGKTTMMD+ITGKTRP G FF Sbjct: 9 LLYLDGVSVSFDGFKALNSLSFVVEPGELRAIIGPNGAGKTTMMDIITGKTRPDEGEVFF 68 Query: 106 GQTIDLTKMTEYEIAHAGIGRKFQRPTVFEQHTVFENLELAMKMDKRVKTTLFARLSSEQ 165 IDLTK E IA GIGRKFQ+PTVFE HTV++NLELA+ + V TLF RL+ E Sbjct: 69 KGDIDLTKKDEAAIAELGIGRKFQKPTVFENHTVWDNLELALNRSRGVFATLFYRLTRED 128 Query: 166 IGKIEEILKLIRLNGQEQRVAGLLSHGQKQWLEIGMLLMQEPQLLLLDEPVAGMSDAETA 225 +IEEIL +RL + +A LSHGQKQWLEIGMLL QEP+LLL+DEPVAGM+DAETA Sbjct: 129 KSRIEEILSTVRLTARRDDLAANLSHGQKQWLEIGMLLAQEPELLLVDEPVAGMTDAETA 188 Query: 226 RTAELLNELRGKHSIMVVEHDMGFVEEIAQGGKVTVLHEGSVLAEGNMRQVQSNERVIEV 285 TA LL E+ S++VVEHDMGF+ ++ G KVT L EGSVLAEG++ V ++ +VIE Sbjct: 189 ETAILLKEIARTRSVVVVEHDMGFIRDL--GVKVTCLAEGSVLAEGSIDFVSNDPKVIEN 246 Query: 286 YLGR 289 YLGR Sbjct: 247 YLGR 250