BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0042.0245.p (241 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1444 [O] COG3531 Predicted protein-disulfide isomerase Rso Ra... 238 8e-63 PA0058 [O] COG3531 Predicted protein-disulfide isomerase Pae Pse... 221 2e-57 YPO0801 [O] COG3531 Predicted protein-disulfide isomerase Ype Ye... 192 4e-49 VCA0901 [O] COG3531 Predicted protein-disulfide isomerase Vch Vi... 110 3e-24 PA0859 [O] COG3531 Predicted protein-disulfide isomerase Pae Pse... 78 2e-14 >RSc1444 [O] COG3531 Predicted protein-disulfide isomerase Rso Ralstonia solanacearum Length = 242 Score = 238 bits (607), Expect = 8e-63, Method: Compositional matrix adjust. Identities = 123/203 (60%), Positives = 144/203 (70%), Gaps = 5/203 (2%) Query: 11 VLHYIHDPLCGWCYGAAPLVAAARQV--LPVQAHGGGMMAGRNRRRVDAQLRDYVMPHDH 68 LHYI DPLCGWCYGAAPLV AAR V L V HGGGM+AG NRR V Q R YVMPHDH Sbjct: 3 TLHYIFDPLCGWCYGAAPLVEAARTVPGLAVAFHGGGMLAGPNRRAVTPQWRSYVMPHDH 62 Query: 69 RIAQMTGQVFGEPYFHGLLKDTDAVFDSAPPTAAVLAVQALGGEAAGLDMLAAIQRAHYQ 128 RIA++TGQ FG PYF GLL+DT AV DS PP A LA QA+GG GLDM+ +QRAHY+ Sbjct: 63 RIAELTGQPFGTPYFEGLLRDTTAVMDSEPPITAALAAQAIGGR--GLDMIHRVQRAHYE 120 Query: 129 QGRRISEPATLIELAQALGIEAAAFSAELQRIEQEELADHIEASRELLNYVGGRGFPTFV 188 +GRRI++ L ELA LG+ A F AE R HI ASR LL+ VGG+G+PTFV Sbjct: 121 EGRRIADAPVLRELAVDLGLPADVFDAECARQSGALTQQHIAASRRLLDRVGGQGYPTFV 180 Query: 189 LQRGD-TLEVLDTGRWLGQPEQW 210 L+ G+ ++V+D G WLG+PE W Sbjct: 181 LEDGEGRMDVVDAGAWLGRPEAW 203 >PA0058 [O] COG3531 Predicted protein-disulfide isomerase Pae Pseudomonas aeruginosa Length = 234 Score = 221 bits (562), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 119/214 (55%), Positives = 144/214 (67%), Gaps = 5/214 (2%) Query: 8 HDTVLHYIHDPLCGWCYGAAPLVAAARQV--LPVQAHGGGMMAGRNRRRVDAQLRDYVMP 65 +D LHY++DPLCGWCYGA+PL+AAA +V L V+ HGGGMM NR+ V A LR YVMP Sbjct: 2 NDLTLHYLYDPLCGWCYGASPLLAAACEVTGLDVRLHGGGMMTDANRQPVGAGLRHYVMP 61 Query: 66 HDHRIAQMTGQVFGEPYFHGLLKDTDAVFDSAPPTAAVLAVQALGGEAAGLDMLAAIQRA 125 HD RIAQ+TGQ FG+ YF GLL+DT AVFDSAPPTAAVLA +AL G A MLA IQRA Sbjct: 62 HDLRIAQLTGQPFGKDYFDGLLRDTSAVFDSAPPTAAVLAAEALDGLGAA--MLARIQRA 119 Query: 126 HYQQGRRISEPATLIELAQALGIEAAAFSAELQRIEQEELADHIEASRELLNYVGGRGFP 185 HY +GRRI+E ++ A F+ E L H SR L+N +G GFP Sbjct: 120 HYVEGRRIAE-RPVLLELGAELGLGEGFAEAFDACSGEPLRAHFADSRRLMNRLGAAGFP 178 Query: 186 TFVLQRGDTLEVLDTGRWLGQPEQWANYLRDETR 219 TF L+R L+VLDTGR+LGQP+ W +L + R Sbjct: 179 TFALERDGRLQVLDTGRYLGQPDDWRAFLETQLR 212 >YPO0801 [O] COG3531 Predicted protein-disulfide isomerase Ype Yersinia pestis Length = 211 Score = 192 bits (489), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 107/210 (50%), Positives = 133/210 (63%), Gaps = 6/210 (2%) Query: 10 TVLHYIHDPLCGWCYGAAPLVAAARQV--LPVQAHGGGMMAGRNRRRVDAQLRDYVMPHD 67 T LHYI DPLCGWCYGAAPLV A+ + L + HGGGMM+G NRR++D Q R YVMPHD Sbjct: 4 TTLHYIFDPLCGWCYGAAPLVQTAQNIPGLTLVLHGGGMMSGANRRQIDTQWRSYVMPHD 63 Query: 68 HRIAQMTGQVFGEPYFHGLLKDTDAVFDSAPPTAAVLAVQALGGEAAGLDMLAAIQRAHY 127 RIA++TGQ FG+ YF+ LL DT A+ DS PP AA+LA +AL G+ A ML IQ AHY Sbjct: 64 KRIAELTGQTFGDNYFNQLLNDTSAIMDSTPPIAAILAAEALAGDGA--KMLHRIQLAHY 121 Query: 128 QQGRRISEPATLIELAQALGIEAAAFSAELQRIEQEELADHIEASRELLNYVGGRGFPTF 187 +GRRI++ L LA +G+ AF I Q+ A HI SR +L V G GFPTF Sbjct: 122 VEGRRIADTPVLTVLAADIGLNTEAFINAFN-IAQKHAAQHIAESRTMLAKVQGHGFPTF 180 Query: 188 VLQR-GDTLEVLDTGRWLGQPEQWANYLRD 216 +LQ + V+ G + G W N L + Sbjct: 181 ILQDAAGKMTVVPAGDYFGNQPGWINRLTN 210 >VCA0901 [O] COG3531 Predicted protein-disulfide isomerase Vch Vibrio cholerae Length = 209 Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 64/205 (31%), Positives = 108/205 (52%), Gaps = 8/205 (3%) Query: 12 LHYIHDPLCGWCYGAAPLVA--AARQVLPVQAHGGGMMAGRNRRRVDAQLRDYVMPHDHR 69 +HYI DP+CGWC+GA L+ A + L + H GGMM ++ ++ R +++ D R Sbjct: 4 VHYIFDPMCGWCFGATSLMEQLAQQSHLELVLHPGGMM---DKAQLSPDFRAHILQADQR 60 Query: 70 IAQMTGQVFGEPYFHGLLKDTDAVFDSAPPTAAVLAVQALGGEAAGLDMLAAIQRAHYQQ 129 I + TG FGE Y + + DS A++A + G DML AIQRAHYQQ Sbjct: 61 IQRETGAEFGEAYLERVRSGQPLMLDSYFTAQAIIAARLAGKR--DFDMLKAIQRAHYQQ 118 Query: 130 GRRISEPATLIELAQALGIEAAAFSAELQRIEQEELADHIEASRELLNYVGGRGFPTFVL 189 G +++ + +LAQA+GI + + + + +D I ++ L+ +G GFP+ + Sbjct: 119 GLDVTQTEVMQQLAQAMGITPETWQNVMPQAAAKVRSD-IAQTQRLMQQLGLGGFPSLAI 177 Query: 190 QRGDTLEVLDTGRWLGQPEQWANYL 214 ++ + L + +P++W +L Sbjct: 178 EQNNEWYTLSPSHYYRRPQEWQAWL 202 >PA0859 [O] COG3531 Predicted protein-disulfide isomerase Pae Pseudomonas aeruginosa Length = 200 Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 61/188 (32%), Positives = 94/188 (50%), Gaps = 14/188 (7%) Query: 19 LCGWCYGAAPLVAA-ARQV----LPVQAHGGGMMAGRNRRRVDAQLRDYVMPHDHRIAQM 73 +C WC+G AP+ A +RQ + GG+ AG +D R Y++ H + Q Sbjct: 1 MCSWCWGFAPVAEALSRQAAADGVAFHLVAGGLRAGHGAA-LDPNTRGYILGHWQTVQQT 59 Query: 74 TGQVFGEPYFHGLLKDTDAVFDSAPPTAAVLAVQALGGEAAGLDMLAAIQRAHYQQGRRI 133 TGQ F F L D V+D+ P A++A ++L E+A ++ AIQRA Y +GR + Sbjct: 60 TGQPF---RFDDALPD-GFVYDTEPACRALVAARSLDEESA-WPLVRAIQRAFYAEGRDV 114 Query: 134 SEPATLIELAQALGIEAAAFSAELQRIEQEELADHIEASRELLNYVGGRGFPTFVLQRGD 193 ++ A L LA+A+G+ F+A + E D A + +G GFPT + +R Sbjct: 115 TQAAVLAGLAEAVGLPRIEFAAAF---DSGEARDATAADFAWVQDLGIAGFPTLLAERNG 171 Query: 194 TLEVLDTG 201 L +L G Sbjct: 172 QLALLTNG 179