BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0042.0224.p         (247 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

mlr4587 [K] COG1396 Predicted transcriptional regulators Mlo Mes...    92   9e-19

>mlr4587 [K] COG1396 Predicted transcriptional regulators Mlo Mesorhizobium
           loti
          Length = 267

 Score = 92.4 bits (228), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 69/228 (30%), Positives = 112/228 (49%), Gaps = 6/228 (2%)

Query: 7   LVNALKNLLKARGITYAQLAKGLGLSEASVKRIFAERSFTLERLDQVCTLLGIQISD-LA 65
           +  ALK  LKA+G+TY QLA+ +G+SE +VKRIF ER+  L+RL ++C   G+++ + L 
Sbjct: 8   IFEALKRTLKAKGVTYRQLAERMGVSEPTVKRIFHERNCKLDRLVEICAAAGVELENVLG 67

Query: 66  RMVVAEQPVPSRLTEEQEKKLVADPKLLLVAVHALHQWTLEEIVSSFAMTQAECIRLLAR 125
            M     P+ + +  E E++L   P LL + V    ++T E I+ S  +++A     L  
Sbjct: 68  SMNRGPGPL-NHIAPEIERRLAGRPALLFIFVMLSEKFTPEGIMRSQGLSEASMFLYLRD 126

Query: 126 LDKLGILDLLPNNRIRVRVAPDFSWLPGGPIQQYFRAQLRN--DFFNSHFDKPGEKMIMV 183
           L++LG++ L      R+ V     W   GP++  F    +N   +  +H DK     +  
Sbjct: 127 LEELGLIALGRGLSARLLVETPIQWNFEGPLRPLFEMTNKNFIGWAITHIDKEA-TFVSF 185

Query: 184 SGTLSEESNAAVQRAMNRLSAEF-LAAHQQDLALPLERRTGSAMIVAL 230
           S  +  E+   V+R    L+    L AH      P +  TG     A 
Sbjct: 186 SRRMRPETAEMVRREAEELAERVKLLAHHDQHTTPEDGLTGYKFTFAF 233