BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0042.0168.p (565 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value alr2485_2 [H] COG0171 NAD synthase Nos Nostoc sp. PCC 7120 253 1e-66 TM1253_2 [H] COG0171 NAD synthase Tma Thermotoga maritima 249 1e-65 slr1691_2 [H] COG0171 NAD synthase Syn Synechocystis 241 3e-63 SMc00161_2 [H] COG0171 NAD synthase Sme Sinorhizobium meliloti 229 2e-59 mll0818_2 [H] COG0171 NAD synthase Mlo Mesorhizobium loti 228 4e-59 >alr2485_2 [H] COG0171 NAD synthase Nos Nostoc sp. PCC 7120 Length = 295 Score = 253 bits (645), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 131/282 (46%), Positives = 182/282 (64%), Gaps = 12/282 (4%) Query: 284 ILLGLRDYARRCGFGKVVVGSSGGIDSAVTIALAAEALGAQNVVAVTMPSMFSSAGSIDD 343 ++LG+RDYA++C F +VV+G SGGIDSA+ +A ALG +NV V MPS +SS SI D Sbjct: 13 LVLGVRDYAQKCRFSQVVLGLSGGIDSALVATIATAALGKENVFGVLMPSPYSSEHSISD 72 Query: 344 SETLCRALGVTLFRHPIADLVREFEDGFATAFGAPLRGLPLENLQARVRGAILMEYSNGY 403 + L LG+ PI +L++ F+ F GL EN+Q+R+RG +LM +N + Sbjct: 73 ALALADNLGIKTQILPIGELMQSFDQSLVELFAGTEFGLAEENIQSRIRGNLLMAIANKF 132 Query: 404 DALLLTTGNKSEISVGYCTLYGDTNGGLGLIGDLYKTEVYALARHLNAQAGREIIPAAII 463 LLL+TGNKSE++VGYCTLYGD NGGL +I D+ KT VY+L LN+ IIP I+ Sbjct: 133 GYLLLSTGNKSEMAVGYCTLYGDMNGGLAVIADVPKTRVYSLCNWLNSHQS-PIIPENIL 191 Query: 464 DKAPSAELAPDQRDTDSLPPYEVLDEILKWHIEGSRLPADEAQAAARTVEQLSGTDTGAA 523 KAPSAEL P Q D DSLPPYE+LD+IL+ I ++V ++ Sbjct: 192 TKAPSAELKPGQVDQDSLPPYEILDDILQRFIHNH-----------QSVGEIVAAGHEPV 240 Query: 524 LVERICRMVARNEYKRRQSPPVIRLRSRAFGSGRQIPIAVRY 565 +V+R+ +MVAR E+KRRQ+PP +++ RAFG+G ++PIA + Sbjct: 241 VVDRVIQMVARAEFKRRQAPPGLKITDRAFGTGWRMPIASNW 282 >TM1253_2 [H] COG0171 NAD synthase Tma Thermotoga maritima Length = 292 Score = 249 bits (636), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 128/284 (45%), Positives = 176/284 (61%), Gaps = 11/284 (3%) Query: 282 RQILLGLRDYARRCGFGKVVVGSSGGIDSAVTIALAAEALGAQNVVAVTMPSMFSSAGSI 341 R ++ GLRDY R+ GF KVV+G SGG+DS++ +A EALG +NV V MPSM++S SI Sbjct: 16 RALITGLRDYVRKNGFEKVVIGLSGGMDSSLVAVIATEALGKENVKGVLMPSMYTSKESI 75 Query: 342 DDSETLCRALGVTLFRHPIADLVREFEDGFATAFGAPLRGLPLENLQARVRGAILMEYSN 401 +D++TL + LG+ F PI D+ + + F + ENLQAR+RG LM SN Sbjct: 76 EDAQTLAKNLGIETFIIPITDVFHSYLETLKGVFAGREPDITEENLQARIRGNYLMALSN 135 Query: 402 GYDALLLTTGNKSEISVGYCTLYGDTNGGLGLIGDLYKTEVYALARHLNAQAGREIIPAA 461 + L+LTTGNKSE++ GY TLYGD GG +I D+YKT+VY + R N+ G+EIIP Sbjct: 136 KFGWLVLTTGNKSEMATGYATLYGDMAGGFAVIKDVYKTDVYRIGRWYNSWRGKEIIPEN 195 Query: 462 IIDKAPSAELAPDQRDTDSLPPYEVLDEILKWHIEGSRLPADEAQAAARTVEQLSGTDTG 521 I K P+AEL P Q D + LPPYEVLDEIL+ +IE P + A G D Sbjct: 196 IFVKPPTAELRPGQTDQEKLPPYEVLDEILRLYIEEGLDPEEIAS---------KGFDRK 246 Query: 522 AALVERICRMVARNEYKRRQSPPVIRLRSRAFGSGRQIPIAVRY 565 L + M+ +NEYKR+Q+ +++ +RAFG ++PI R+ Sbjct: 247 TVL--DVTEMIRKNEYKRKQAAIGVKISTRAFGKDWRMPITNRF 288 >slr1691_2 [H] COG0171 NAD synthase Syn Synechocystis Length = 284 Score = 241 bits (615), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 126/279 (45%), Positives = 179/279 (64%), Gaps = 13/279 (4%) Query: 284 ILLGLRDYARRCGFGKVVVGSSGGIDSAVTIALAAEALGAQNVVAVTMPSMFSSAGSIDD 343 ++LG+ DY +CGF K ++G SGGIDS++ A+A EALG +NV+ + MPS +SS SI D Sbjct: 11 LVLGVGDYLHKCGFSKAILGLSGGIDSSLVAAIAVEALGKENVLGILMPSPYSSDHSIQD 70 Query: 344 SETLCRALGVTLFRHPIADLVREFEDGFATAFGAPLRGLPLENLQARVRGAILMEYSNGY 403 + L + LG+ PI ++ ++ F GL ENLQ+R+RG +LM +N + Sbjct: 71 ALALAKNLGMNTQTIPIGPIMATYDQALVPLFQDAPFGLAEENLQSRIRGNLLMAIANKF 130 Query: 404 DALLLTTGNKSEISVGYCTLYGDTNGGLGLIGDLYKTEVYALARHLNAQAGREIIPAAII 463 LLL+TGNKSE++VGYCTLYGD NGGL I D+ KT+V+ L R LN + + IIP +++ Sbjct: 131 GHLLLSTGNKSELAVGYCTLYGDMNGGLAAIADVPKTQVFELCRWLNRE--QTIIPPSVL 188 Query: 464 DKAPSAELAPDQRDTDSLPPYEVLDEILKWHIEGSRLPADEAQAAARTVEQLSGTDTGAA 523 K PSAEL P Q DTDSLPPY+VLD IL +E + P + A Sbjct: 189 TKPPSAELKPGQVDTDSLPPYDVLDGILGRLVEKHQSPQEIINAGFER-----------E 237 Query: 524 LVERICRMVARNEYKRRQSPPVIRLRSRAFGSGRQIPIA 562 +V +IC++V ++E+KRRQ+ P +++ RAFGSG ++PIA Sbjct: 238 VVLKICQLVQKSEFKRRQAAPGLKVTDRAFGSGWRMPIA 276 >SMc00161_2 [H] COG0171 NAD synthase Sme Sinorhizobium meliloti Length = 298 Score = 229 bits (583), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 131/291 (45%), Positives = 168/291 (57%), Gaps = 18/291 (6%) Query: 282 RQILLGLRDYARRCGFGKVVVGSSGGIDSAVTIALAAEALGAQNVVAVTMPSMFSSAGSI 341 R +LG RDY + GF VV+G SGGIDSA+ ALA +ALG + V V +P ++S S+ Sbjct: 15 RACMLGFRDYVNKNGFRNVVLGLSGGIDSAICTALAVDALGEERVRTVMLPYRYTSRESL 74 Query: 342 DDSETLCRALGVTLFRHPIADLVREFEDGFATAFGAPLRGLPLENLQARVRGAILMEYSN 401 D+E +ALG I + V F A F G+ ENLQ+R RG ILM SN Sbjct: 75 RDAEACAKALGCRYDIVAIEEPVEGFLSALADTFEGTEAGITEENLQSRTRGTILMAISN 134 Query: 402 GYDALLLTTGNKSEISVGYCTLYGDTNGGLGLIGDLYKTEVYALARHLNAQA-------G 454 + ++++TTGNKSE+SVGY TLYGD NGG I DLYK +VYALAR N Sbjct: 135 KFGSMVVTTGNKSEMSVGYATLYGDMNGGFNPIKDLYKMQVYALARWRNGTVPPGALGPS 194 Query: 455 REIIPAAIIDKAPSAELAPDQRDTDSLPPYEVLDEILKWHIEGSRLPADEAQAAARTVEQ 514 E+IP IIDKAPSAEL PDQ D DSLPPY VLD+IL+ +E + E+ Sbjct: 195 GEVIPQNIIDKAPSAELRPDQTDQDSLPPYPVLDDILECLVE-----------KEMSTEE 243 Query: 515 LSGTDTGAALVERICRMVARNEYKRRQSPPVIRLRSRAFGSGRQIPIAVRY 565 + A V RI ++ EYKRRQS P +++ + FG R+ PI R+ Sbjct: 244 IVARGHEEATVHRIEHLLYIAEYKRRQSAPGVKITRKNFGRDRRYPITNRF 294 >mll0818_2 [H] COG0171 NAD synthase Mlo Mesorhizobium loti Length = 299 Score = 228 bits (580), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 130/291 (44%), Positives = 169/291 (58%), Gaps = 18/291 (6%) Query: 282 RQILLGLRDYARRCGFGKVVVGSSGGIDSAVTIALAAEALGAQNVVAVTMPSMFSSAGSI 341 R +LGLRDY + GF VV+G SGGIDSA+ ALA +ALG + + AV MP ++S S+ Sbjct: 16 RACMLGLRDYVNKNGFKNVVLGLSGGIDSAICAALAVDALGEERLRAVMMPYRYTSKDSL 75 Query: 342 DDSETLCRALGVTLFRHPIADLVREFEDGFATAFGAPLRGLPLENLQARVRGAILMEYSN 401 D+E RALG PI + V F F G+ ENLQ+R RG ILM SN Sbjct: 76 KDAEDCARALGCRYDIVPIFEPVEGFLHALTQLFEGTKEGITEENLQSRARGTILMAISN 135 Query: 402 GYDALLLTTGNKSEISVGYCTLYGDTNGGLGLIGDLYKTEVYALARHLNAQA-------G 454 + ++++TTGNKSE+SVGY TLYGD NGG I DLYK +VYAL+R N+ Sbjct: 136 KFGSMVVTTGNKSEMSVGYATLYGDMNGGFNPIKDLYKMQVYALSRWRNSHVPPGALGPS 195 Query: 455 REIIPAAIIDKAPSAELAPDQRDTDSLPPYEVLDEILKWHIEGSRLPADEAQAAARTVEQ 514 E+IP IIDKAPSAEL +Q D DSLPPY VLD+IL+ +E V+ Sbjct: 196 GEVIPKNIIDKAPSAELRENQTDQDSLPPYPVLDDILECLVENE-----------MGVDD 244 Query: 515 LSGTDTGAALVERICRMVARNEYKRRQSPPVIRLRSRAFGSGRQIPIAVRY 565 + A V RI ++ EYKRRQ+ P +++ + FG R+ PI R+ Sbjct: 245 IVARGHDRATVTRIEHLLYIAEYKRRQAAPGVKITRKNFGRDRRYPITNRF 295