BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0042.0102.p         (80 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc0241 [S] COG4317 Uncharacterized protein conserved in bacteri...   116   1e-26
SMa1820 Non COG                                                        93   1e-19
AGl1747 [S] COG4317 Uncharacterized protein conserved in bacteri...    78   5e-15

>RSc0241 [S] COG4317 Uncharacterized protein conserved in bacteria Rso
          Ralstonia solanacearum
          Length = 96

 Score =  116 bits (291), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 57/78 (73%), Positives = 65/78 (83%)

Query: 1  MKPYLISLFMGILAGLIYAALHVQSPAPPIIALLGLLGMLIGEQVVPIVRRKLAGEPLTA 60
          MKPYLISL  GIL G+IYA LHV+SPAPP IAL+GLLGMLIGEQ+VP  +R LAGEPLT 
Sbjct: 1  MKPYLISLGAGILVGIIYALLHVRSPAPPTIALVGLLGMLIGEQIVPAAQRLLAGEPLTV 60

Query: 61 SWFHRECMPKITGTPPPE 78
          +WF  EC+PKITG P P+
Sbjct: 61 AWFRHECVPKITGAPSPK 78


>SMa1820 Non COG
          Length = 102

 Score = 93.2 bits (230), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 42/76 (55%), Positives = 60/76 (78%)

Query: 1  MKPYLISLFMGILAGLIYAALHVQSPAPPIIALLGLLGMLIGEQVVPIVRRKLAGEPLTA 60
          MK YL+SL  G+L G+IY+ L+V+SPAPP+IAL+GLLG+L+GEQ VP+V+R ++G P+  
Sbjct: 7  MKMYLLSLGAGLLVGVIYSLLNVRSPAPPVIALVGLLGILVGEQAVPLVKRLMSGNPVNI 66

Query: 61 SWFHRECMPKITGTPP 76
          SWF+  C+P + G  P
Sbjct: 67 SWFNSHCIPHVFGELP 82


>AGl1747 [S] COG4317 Uncharacterized protein conserved in bacteria Atu
          Agrobacterium tumefaciens strain C58 (Cereon)
          Length = 117

 Score = 77.8 bits (190), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 35/65 (53%), Positives = 51/65 (78%)

Query: 1  MKPYLISLFMGILAGLIYAALHVQSPAPPIIALLGLLGMLIGEQVVPIVRRKLAGEPLTA 60
          MK YL+SL  G+L G++Y+ L+V+SPAPP+IAL+GLLG+L+GEQ++P  R  +  EP   
Sbjct: 22 MKVYLLSLGAGLLVGIVYSLLNVRSPAPPVIALVGLLGILVGEQIIPFARSIIDREPAAV 81

Query: 61 SWFHR 65
          SWF++
Sbjct: 82 SWFNQ 86