BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0042.0096.p         (179 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AGl212 [P] COG0783 DNA-binding ferritin-like protein (oxidative ...   226   3e-59
CC2873 [P] COG0783 DNA-binding ferritin-like protein (oxidative ...    97   2e-20
RSc2687 [P] COG0783 DNA-binding ferritin-like protein (oxidative...    84   2e-16
all0458 [P] COG0783 DNA-binding ferritin-like protein (oxidative...    79   4e-15
all4145 [P] COG0783 DNA-binding ferritin-like protein (oxidative...    79   5e-15

>AGl212 [P] COG0783 DNA-binding ferritin-like protein (oxidative damage
           protectant) Atu Agrobacterium tumefaciens strain C58
           (Cereon)
          Length = 212

 Score =  226 bits (575), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 103/162 (63%), Positives = 122/162 (75%)

Query: 15  KRRMAPLATPGVLSEQARQEVGGALTMLLADIFALYLKTKNFHWHMSGPHFRDYHLLLDD 74
           K R  PLATP  L+ +A +E+  ALT LLAD+F LY+KTKNFHWH+SGPHFRDYH LLD+
Sbjct: 48  KNRKLPLATPTDLATEASREISAALTALLADVFTLYIKTKNFHWHVSGPHFRDYHTLLDE 107

Query: 75  QSQQIIAITDAVAERVRKIGGATLRSTGHIGKLQRLADNDADFVTPADMLAELREDNLRL 134
           Q  QI A+TD +AER RKIGG T+RS  HI +++RL DNDADFVTP DMLAELREDN +L
Sbjct: 108 QGAQIFAMTDDIAERARKIGGTTIRSISHIARVKRLLDNDADFVTPEDMLAELREDNKQL 167

Query: 135 VGFMMATHELCDQHGDVATASLLENWIDEAEQRAWFLFESGR 176
              +  TH L     D AT SL+ENWIDE E+R WFLFE+ R
Sbjct: 168 TAILRQTHNLTSDLNDHATTSLIENWIDETERRTWFLFETTR 209


>CC2873 [P] COG0783 DNA-binding ferritin-like protein (oxidative damage
           protectant) Ccr Caulobacter vibrioides
          Length = 178

 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 55/154 (35%), Positives = 85/154 (55%), Gaps = 2/154 (1%)

Query: 18  MAPLATPGVLSEQARQEVGGALTMLLADIFALYLKTKNFHWHMSGPHFRDYHLLLDDQSQ 77
           MA     G+ ++Q R ++  +L  +LAD +ALYLKT  +HW++ GP+F+  H+LL+ Q Q
Sbjct: 20  MAAALNTGLTAKQ-RTDIAASLNKVLADSYALYLKTHGYHWNVRGPNFQSLHVLLEGQYQ 78

Query: 78  QIIAITDAVAERVRKIGGATLRSTGHIGKLQRLADNDADFVTPADMLAELREDNLRLVGF 137
           +  A  DA+AER+R +G    +     G L  L D D +      M+ EL+ DN  ++  
Sbjct: 79  EEWAALDAIAERIRALGELAPQGYAAFGNLSSLKDGDPEQDWEG-MIGELKADNETVIRT 137

Query: 138 MMATHELCDQHGDVATASLLENWIDEAEQRAWFL 171
           +     + D+ GD ATA LL   +   E+ AW L
Sbjct: 138 LRDAMPIADEAGDEATADLLTQRLQAHEKHAWML 171


>RSc2687 [P] COG0783 DNA-binding ferritin-like protein (oxidative damage
           protectant) Rso Ralstonia solanacearum
          Length = 166

 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 48/145 (33%), Positives = 75/145 (51%), Gaps = 5/145 (3%)

Query: 29  EQARQEVGGALTMLLADIFALYLKTKNFHWHMSGPHFRDYHLLLDDQSQQIIAITDAVAE 88
           E+ R+++   L+ LLAD ++LYLKT NFHW+++GP F   HL+ + Q  ++    D+VAE
Sbjct: 20  EKDRKKIAEGLSRLLADTYSLYLKTHNFHWNVTGPMFNTLHLMFETQYNELWTAVDSVAE 79

Query: 89  RVRKIGGATLRSTGHIGKLQRLADNDADFVTPA--DMLAELREDNLRLVGFMMATHELCD 146
           R+R +G     S     +L  + +       PA  DM+ EL   +  +     +     D
Sbjct: 80  RIRALGYPAPGSYSEFARLSSIPEAKG---VPAAEDMIRELVAGHESVTRTARSLFPDVD 136

Query: 147 QHGDVATASLLENWIDEAEQRAWFL 171
           +  D  TA LL   +D  E+ AW L
Sbjct: 137 KAADEPTADLLTQRMDIHEKTAWML 161


>all0458 [P] COG0783 DNA-binding ferritin-like protein (oxidative damage
           protectant) Nos Nostoc sp. PCC 7120
          Length = 179

 Score = 79.3 bits (194), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 76/146 (52%), Gaps = 1/146 (0%)

Query: 27  LSEQARQEVGGALTMLLADIFALYLKTKNFHWHMSGPHFRDYHLLLDDQSQQIIAITDAV 86
           L+++ RQ V   L   LAD + L +KTK +HW + GP FR  H L ++  +++    DA+
Sbjct: 8   LTDEQRQGVINLLNQDLADSYLLLVKTKKYHWDVVGPQFRSLHQLWEEHYEKLTENIDAI 67

Query: 87  AERVRKIGGATLRSTGHIGKLQRLADNDADFVTPADMLAELREDNLRLV-GFMMATHELC 145
           AERVR +GG  + S     +L  L ++  D  +   M+A L +D+ +L+           
Sbjct: 68  AERVRTLGGYPIGSMEGFLQLATLKEHAGDVPSATGMVANLVQDHEQLIRNLRDHVDRSG 127

Query: 146 DQHGDVATASLLENWIDEAEQRAWFL 171
           D+  D  TA  L   ++E E+ AW L
Sbjct: 128 DEFQDQGTADFLTGLMEEHEEIAWML 153


>all4145 [P] COG0783 DNA-binding ferritin-like protein (oxidative damage
           protectant) Nos Nostoc sp. PCC 7120
          Length = 163

 Score = 79.0 bits (193), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 71/145 (48%), Gaps = 1/145 (0%)

Query: 27  LSEQARQEVGGALTMLLADIFALYLKTKNFHWHMSGPHFRDYHLLLDDQSQQIIAITDAV 86
           + E  R ++   L+ LLAD + LYLKT NFHW+++GP F+  HL+ + Q  ++    D V
Sbjct: 14  IDEANRAKIAEGLSRLLADTYTLYLKTHNFHWNVTGPMFQTLHLMFETQYTELALAVDLV 73

Query: 87  AERVRKIGGATLRSTGHIGKLQRLADNDADFVTPADMLAELREDNLRLVGFMMATHELCD 146
           AER+R +G     +     KL  + +         +M+  L E    +V    +   + D
Sbjct: 74  AERIRALGYPAPGTYSEYAKLSSIPETPG-VPKAKEMIRLLVEGQEAVVRTARSIFPVVD 132

Query: 147 QHGDVATASLLENWIDEAEQRAWFL 171
           +  D  TA LL   +   E+ AW L
Sbjct: 133 EVNDEPTADLLTQRMQVHEKTAWML 157