BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0042.0036.p (225 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BMEI1312 [S] COG1284 Uncharacterized conserved protein Bme Bruce... 149 5e-36 AGc869 [S] COG1284 Uncharacterized conserved protein Atu Agrobac... 146 4e-35 SMc02240 [S] COG1284 Uncharacterized conserved protein Sme Sinor... 144 2e-34 AGc867 [S] COG1284 Uncharacterized conserved protein Atu Agrobac... 139 4e-33 VC0940 [S] COG1284 Uncharacterized conserved protein Vch Vibrio ... 79 1e-14 >BMEI1312 [S] COG1284 Uncharacterized conserved protein Bme Brucella melitensis Length = 217 Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 79/207 (38%), Positives = 123/207 (59%), Gaps = 3/207 (1%) Query: 20 APVRGPAASPV---RHSWIDNLQGQFFGVVMVAFGMSMLHSLGLIIGQIAGVAFLVSYGS 76 AP A+SP+ RH ++ G +A G+++ L+ G AG+A L+ Y + Sbjct: 8 APSLADASSPISVDRHRLYEDAIAMLIGTSFIALGITLYSHAMLMTGSTAGIALLIHYAT 67 Query: 77 GISFGLAFTLINLPFYLLAALRMGAAFTWRTLAAVTAVSLLTNIAGNYISYRHLDPAVGA 136 G FGL + LINLPFY A RMG AFT RT AAV +S T + + + ++P A Sbjct: 68 GTGFGLLYFLINLPFYYFAVRRMGWAFTIRTFAAVALLSGFTRLMPLSVDFTSINPLFAA 127 Query: 137 VLAGLCVGIGLIALFRHQASCGGMSILAAYVQERTGFKAGWLLMGFDLALFATAAWFLPM 196 ++ G +G+G++ALFRH++ GG++ILA Y+Q+ G +AGW +G D+ + + +F+P Sbjct: 128 LMGGTLMGMGVLALFRHRSGVGGVNILALYLQDAYGIRAGWFQLGLDVLIMLASLFFIPW 187 Query: 197 ERVLYSLAGAITMNLFVAWNHRYEWYI 223 E ++ SL GA+ MN+ +A NH+ YI Sbjct: 188 ENMVLSLVGAVAMNVIIAINHKPGRYI 214 >AGc869 [S] COG1284 Uncharacterized conserved protein Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 237 Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 77/198 (38%), Positives = 121/198 (61%) Query: 27 ASPVRHSWIDNLQGQFFGVVMVAFGMSMLHSLGLIIGQIAGVAFLVSYGSGISFGLAFTL 86 ++P RHS +++ Q G ++++ G+++ + GL+ G + G+AFL Y SG SFG F L Sbjct: 39 SAPDRHSLLEDAQAILAGSMLISLGVTLFSAAGLLTGGVVGLAFLAHYASGFSFGAVFFL 98 Query: 87 INLPFYLLAALRMGAAFTWRTLAAVTAVSLLTNIAGNYISYRHLDPAVGAVLAGLCVGIG 146 NLPFY LA R+G AFT +T A+ +LL+ + ++ ++P A+ GL V G Sbjct: 99 ANLPFYYLAFRRLGLAFTVKTFCAIATTALLSEYMPGFFAFESINPIAAALFGGLTVAAG 158 Query: 147 LIALFRHQASCGGMSILAAYVQERTGFKAGWLLMGFDLALFATAAWFLPMERVLYSLAGA 206 ++ALFRH+ S GG ILA Y+Q+R G++AG + + FD + + + +L S+ GA Sbjct: 159 MLALFRHRTSLGGFGILALYLQDRFGWRAGLVQLAFDGMVLGCSFFVATPFVILCSILGA 218 Query: 207 ITMNLFVAWNHRYEWYIA 224 + MNL +A NHR + YIA Sbjct: 219 LVMNLTLAVNHRNDRYIA 236 >SMc02240 [S] COG1284 Uncharacterized conserved protein Sme Sinorhizobium meliloti Length = 211 Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 86/197 (43%), Positives = 127/197 (64%) Query: 28 SPVRHSWIDNLQGQFFGVVMVAFGMSMLHSLGLIIGQIAGVAFLVSYGSGISFGLAFTLI 87 SP RH+ ++++QG F G ++ A G+ L S GL+ G AGVAFL+ Y +G++FGL F L+ Sbjct: 14 SPTRHTPVEDVQGVFSGSLVAALGLYFLASAGLLTGSTAGVAFLLHYATGVNFGLTFFLL 73 Query: 88 NLPFYLLAALRMGAAFTWRTLAAVTAVSLLTNIAGNYISYRHLDPAVGAVLAGLCVGIGL 147 NLPF+ L+ R+G AFT +T A+ S LT++ + P A++ GL +G GL Sbjct: 74 NLPFFYLSLKRLGPAFTLKTFIAIALTSFLTDMQSRLFEIGQIHPGWAALIGGLLLGYGL 133 Query: 148 IALFRHQASCGGMSILAAYVQERTGFKAGWLLMGFDLALFATAAWFLPMERVLYSLAGAI 207 +AL+RH+AS GG+ IL Y+QER G +AG + + DL + A A + V++S+ GA+ Sbjct: 134 LALYRHRASLGGVGILGIYLQERFGIRAGLVQLAIDLVVLAAAFFVTTPTVVIWSVLGAV 193 Query: 208 TMNLFVAWNHRYEWYIA 224 +NLFVA NHR + YIA Sbjct: 194 VLNLFVAINHRADRYIA 210 >AGc867 [S] COG1284 Uncharacterized conserved protein Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 230 Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 84/198 (42%), Positives = 127/198 (64%) Query: 26 AASPVRHSWIDNLQGQFFGVVMVAFGMSMLHSLGLIIGQIAGVAFLVSYGSGISFGLAFT 85 ++ P RH+ ++++QG G ++ A G +L +GL+ G AGVAFL+ Y GISFGL F Sbjct: 30 SSDPARHAPVEDVQGIVTGAIVSALGFYLLAKVGLLTGGTAGVAFLLHYAFGISFGLLFF 89 Query: 86 LINLPFYLLAALRMGAAFTWRTLAAVTAVSLLTNIAGNYISYRHLDPAVGAVLAGLCVGI 145 L+NLPFY L+ R+G AF+ +T A+ VS+LT + ++ ++P A+L GL +G Sbjct: 90 LVNLPFYYLSFRRLGLAFSCKTFIAIGLVSVLTEVEARWMVIDSINPLWAALLGGLLLGY 149 Query: 146 GLIALFRHQASCGGMSILAAYVQERTGFKAGWLLMGFDLALFATAAWFLPMERVLYSLAG 205 GL+AL+RH+AS GG+ ILA Y+Q+R G +AG + + FD + A + V YS+ G Sbjct: 150 GLLALYRHRASLGGIGILAIYIQDRFGIRAGLIQLAFDACVMLCAFLVIDPATVAYSIVG 209 Query: 206 AITMNLFVAWNHRYEWYI 223 A +N+F+A NHR + YI Sbjct: 210 AFVLNIFLAINHRSDRYI 227 >VC0940 [S] COG1284 Uncharacterized conserved protein Vch Vibrio cholerae Length = 198 Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 60/192 (31%), Positives = 101/192 (52%), Gaps = 4/192 (2%) Query: 31 RHSWIDNLQGQFFGVVMVAFGMSMLHSLGLIIGQIAGVAFLVSYGSGISFGLAFTLINLP 90 + WI L G F +VA G+ L + L+ G G+A L++ ++FG+ + L N P Sbjct: 7 KEDWIAILTGTF----LVAQGVYFLQAGQLLTGGTTGLALLMTQFLPLTFGVLYFLSNCP 62 Query: 91 FYLLAALRMGAAFTWRTLAAVTAVSLLTNIAGNYISYRHLDPAVGAVLAGLCVGIGLIAL 150 FYLLA R GA F + + + VS+ + I+ ++ AV GL +G+G++ L Sbjct: 63 FYLLAWKRFGARFAFNSAISGALVSIFADHLAMLITLEKVNVVYCAVAGGLLMGLGMLIL 122 Query: 151 FRHQASCGGMSILAAYVQERTGFKAGWLLMGFDLALFATAAWFLPMERVLYSLAGAITMN 210 FRH++S GG ++L ++Q+R G G M D + + +F+ + S+ GA +N Sbjct: 123 FRHRSSLGGFNVLCLFIQDRFGISVGKSQMAIDGLILLASFFFVSPLTIGLSILGAFLLN 182 Query: 211 LFVAWNHRYEWY 222 + +A NH+ Y Sbjct: 183 IVLAMNHKPSRY 194