BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0042.0012.p (253 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc0642 [O] COG0459 Chaperonin GroEL (HSP60 family) Rso Ralstoni... 362 e-100 XF0615 [O] COG0459 Chaperonin GroEL (HSP60 family) Xfa Xylella f... 356 2e-98 NMA0473 [O] COG0459 Chaperonin GroEL (HSP60 family) NmA Neisseri... 352 3e-97 NMB1972 [O] COG0459 Chaperonin GroEL (HSP60 family) Nme Neisseri... 350 2e-96 PA4385 [O] COG0459 Chaperonin GroEL (HSP60 family) Pae Pseudomon... 330 2e-90 >RSc0642 [O] COG0459 Chaperonin GroEL (HSP60 family) Rso Ralstonia solanacearum Length = 547 Score = 362 bits (930), Expect = e-100, Method: Compositional matrix adjust. Identities = 187/247 (75%), Positives = 214/247 (86%), Gaps = 2/247 (0%) Query: 1 MLEDLAVLTGGTVISEETSKSLEKTALEDLGSAKRVEVRKDSTTVIDGAGAQDKIDARVK 60 MLED+A+LTGG VI+EE +LEK L DLG AKRVE+ K++TT+IDGAG I+ARVK Sbjct: 288 MLEDIAILTGGQVIAEEVGLTLEKATLNDLGQAKRVEIGKENTTIIDGAGDARNIEARVK 347 Query: 61 AIQAQIEETTSDYDREKLQERVAKLAGGVAVIKIGAATEVEMKEKKDRVDDALHATRAAV 120 ++AQIEE TSDYDREKLQERVAKLAGGVAVIK+GAATEVEMKEKK RV+DALHATRAAV Sbjct: 348 QVRAQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAV 407 Query: 121 EEGIVPGGGVALLRARAAISKLEGANADQNAGIQIVLRALEAPLRVIAANAGDEPSVVVA 180 EEGIV GGGVALLRARA IS L+GANADQ+AGI+IVLRA+E PLR I NAGDE SVVVA Sbjct: 408 EEGIVAGGGVALLRARALISGLKGANADQDAGIKIVLRAMEEPLRQIVTNAGDEASVVVA 467 Query: 181 KVYSGKGNFGYNAANGEYGDMVELGVVDPTKVTRTALQNAASVASLILTTDATVAEAPAE 240 V +GKGN+GYNA+ GEYGD+VE+GV+DPTKVTRTALQNAASVASL+LTTD VAE P + Sbjct: 468 NVIAGKGNYGYNASTGEYGDLVEMGVLDPTKVTRTALQNAASVASLMLTTDCAVAELPKD 527 Query: 241 EKEASPA 247 +A+PA Sbjct: 528 --DAAPA 532 >XF0615 [O] COG0459 Chaperonin GroEL (HSP60 family) Xfa Xylella fastidiosa 9a5c Length = 547 Score = 356 bits (914), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 180/248 (72%), Positives = 207/248 (83%) Query: 1 MLEDLAVLTGGTVISEETSKSLEKTALEDLGSAKRVEVRKDSTTVIDGAGAQDKIDARVK 60 MLED+AVLTGGTVISEE SLEK LG AK+V V K++TT+IDG G D I+ RVK Sbjct: 288 MLEDMAVLTGGTVISEEVGLSLEKATTSHLGKAKKVRVSKENTTIIDGIGDNDAINGRVK 347 Query: 61 AIQAQIEETTSDYDREKLQERVAKLAGGVAVIKIGAATEVEMKEKKDRVDDALHATRAAV 120 I+ QIEETTSDYDREKLQERVAKLAGGVAVIK+GAATEVEMKEKK RVDDAL ATRAAV Sbjct: 348 QIKTQIEETTSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVDDALLATRAAV 407 Query: 121 EEGIVPGGGVALLRARAAISKLEGANADQNAGIQIVLRALEAPLRVIAANAGDEPSVVVA 180 EEG++PGGGVAL+RA AIS L+GAN DQ GIQI LRA+EAPLR I ANAG+EPSV++ Sbjct: 408 EEGVIPGGGVALIRAITAISNLKGANEDQTHGIQIALRAMEAPLREIVANAGEEPSVILN 467 Query: 181 KVYSGKGNFGYNAANGEYGDMVELGVVDPTKVTRTALQNAASVASLILTTDATVAEAPAE 240 KV GK NFGYNAA GE+GDMV LG++DPTKVTR+ALQNAAS+A L++TT+A VAEAP + Sbjct: 468 KVKEGKDNFGYNAATGEFGDMVNLGILDPTKVTRSALQNAASIAGLMITTEAMVAEAPKK 527 Query: 241 EKEASPAA 248 ++ PAA Sbjct: 528 DEPTPPAA 535 >NMA0473 [O] COG0459 Chaperonin GroEL (HSP60 family) NmA Neisseria meningitidis Z2491 Length = 544 Score = 352 bits (904), Expect = 3e-97, Method: Compositional matrix adjust. Identities = 177/246 (71%), Positives = 209/246 (84%), Gaps = 1/246 (0%) Query: 1 MLEDLAVLTGGTVISEETSKSLEKTALEDLGSAKRVEVRKDSTTVIDGAGAQDKIDARVK 60 ML+D+A+LTGGTVISEE SLEK L+DLG AKR+E+ K++TT+IDG G +I+ARV Sbjct: 288 MLQDIAILTGGTVISEEVGLSLEKATLDDLGQAKRIEIGKENTTIIDGFGDAAQIEARVA 347 Query: 61 AIQAQIEETTSDYDREKLQERVAKLAGGVAVIKIGAATEVEMKEKKDRVDDALHATRAAV 120 I+ QIE TSDYD+EKLQERVAKLAGGVAVIK+GAATEVEMKEKKDRV+DALHATRAAV Sbjct: 348 EIRQQIETATSDYDKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAV 407 Query: 121 EEGIVPGGGVALLRARAAISKLEGANADQNAGIQIVLRALEAPLRVIAANAGDEPSVVVA 180 EEG+V GGGVALLRARAA+ L NADQ+AG+QIVLRA+E+PLR I ANAG EPSVVV Sbjct: 408 EEGVVAGGGVALLRARAALENLHTGNADQDAGVQIVLRAVESPLRQIVANAGGEPSVVVN 467 Query: 181 KVYSGKGNFGYNAANGEYGDMVELGVVDPTKVTRTALQNAASVASLILTTDATVAEAPAE 240 KV GKGN+GYNA +GEYGDM+E+GV+DP KVTR+ALQ+AAS+A L+LTTD +AE P E Sbjct: 468 KVLEGKGNYGYNAGSGEYGDMIEMGVLDPAKVTRSALQHAASIAGLMLTTDCMIAEIP-E 526 Query: 241 EKEASP 246 +K A P Sbjct: 527 DKPAMP 532 >NMB1972 [O] COG0459 Chaperonin GroEL (HSP60 family) Nme Neisseria meningitidis MC58 Length = 544 Score = 350 bits (898), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 176/246 (71%), Positives = 208/246 (84%), Gaps = 1/246 (0%) Query: 1 MLEDLAVLTGGTVISEETSKSLEKTALEDLGSAKRVEVRKDSTTVIDGAGAQDKIDARVK 60 ML+D+A+LTGG VISEE SLEK L+DLG AKR+E+ K++TT+IDG G +I+ARV Sbjct: 288 MLQDIAILTGGVVISEEVGLSLEKATLDDLGQAKRIEIGKENTTIIDGFGDAAQIEARVA 347 Query: 61 AIQAQIEETTSDYDREKLQERVAKLAGGVAVIKIGAATEVEMKEKKDRVDDALHATRAAV 120 I+ QIE TSDYD+EKLQERVAKLAGGVAVIK+GAATEVEMKEKKDRV+DALHATRAAV Sbjct: 348 EIRQQIETATSDYDKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAV 407 Query: 121 EEGIVPGGGVALLRARAAISKLEGANADQNAGIQIVLRALEAPLRVIAANAGDEPSVVVA 180 EEG+V GGGVALLRARAA+ L NADQ+AG+QIVLRA+E+PLR I ANAG EPSVVV Sbjct: 408 EEGVVAGGGVALLRARAALENLHTGNADQDAGVQIVLRAVESPLRQIVANAGGEPSVVVN 467 Query: 181 KVYSGKGNFGYNAANGEYGDMVELGVVDPTKVTRTALQNAASVASLILTTDATVAEAPAE 240 KV GKGN+GYNA +GEYGDM+E+GV+DP KVTR+ALQ+AAS+A L+LTTD +AE P E Sbjct: 468 KVLEGKGNYGYNAGSGEYGDMIEMGVLDPAKVTRSALQHAASIAGLMLTTDCMIAEIP-E 526 Query: 241 EKEASP 246 +K A P Sbjct: 527 DKPAVP 532 >PA4385 [O] COG0459 Chaperonin GroEL (HSP60 family) Pae Pseudomonas aeruginosa Length = 547 Score = 330 bits (845), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 166/236 (70%), Positives = 198/236 (83%) Query: 1 MLEDLAVLTGGTVISEETSKSLEKTALEDLGSAKRVEVRKDSTTVIDGAGAQDKIDARVK 60 ML+D+A+LTGGTVISEE SLE LE LG+AKRV + K++TT+IDGAG Q I+ARV Sbjct: 288 MLQDIAILTGGTVISEEVGLSLEGATLEHLGNAKRVVINKENTTIIDGAGVQADIEARVL 347 Query: 61 AIQAQIEETTSDYDREKLQERVAKLAGGVAVIKIGAATEVEMKEKKDRVDDALHATRAAV 120 I+ QIEETTSDYDREKLQER+AKLAGGVAVIK+GAATEVEMKEKK RV+DALHATRAAV Sbjct: 348 QIRKQIEETTSDYDREKLQERLAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAV 407 Query: 121 EEGIVPGGGVALLRARAAISKLEGANADQNAGIQIVLRALEAPLRVIAANAGDEPSVVVA 180 EEG+VPGGGVAL+RA AI L+G N +QN GI ++ RA+E+PLR I ANAGDEPSVVV Sbjct: 408 EEGVVPGGGVALVRALQAIEGLKGDNEEQNVGIALLRRAVESPLRQIVANAGDEPSVVVD 467 Query: 181 KVYSGKGNFGYNAANGEYGDMVELGVVDPTKVTRTALQNAASVASLILTTDATVAE 236 KV G GN+G+NAA G YGDM+E+G++DP KVTR+ALQ AAS+ L++TT+A VAE Sbjct: 468 KVKQGSGNYGFNAATGVYGDMIEMGILDPAKVTRSALQAAASIGGLMITTEAMVAE 523