BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0041.0216.p (216 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1005 [L] COG0177 Predicted EndoIII-related endonuclease Rso R... 335 5e-92 YPO2239 [L] COG0177 Predicted EndoIII-related endonuclease Ype Y... 324 1e-88 PM0381 [L] COG0177 Predicted EndoIII-related endonuclease Pmu Pa... 324 1e-88 PA3495 [L] COG0177 Predicted EndoIII-related endonuclease Pae Ps... 323 2e-88 nth [L] COG0177 Predicted EndoIII-related endonuclease Eco Esche... 320 2e-87 >RSc1005 [L] COG0177 Predicted EndoIII-related endonuclease Rso Ralstonia solanacearum Length = 214 Score = 335 bits (859), Expect = 5e-92, Method: Compositional matrix adjust. Identities = 160/212 (75%), Positives = 181/212 (85%) Query: 1 MNPTKRREIFERLRQANPTPTTELEYTTPFELLIAVLLSAQATDVSVNKATRKLYPVANT 60 MNP KRR +FE LR+ NPTPTTELEYTTPFELLIAVLLSAQATDV VNKATRKL+PVA+T Sbjct: 1 MNPAKRRALFETLREHNPTPTTELEYTTPFELLIAVLLSAQATDVGVNKATRKLFPVADT 60 Query: 61 PEAIYRMGVDQLMPYIQTIGLYRTKAKNVIETCRILIEEQGGQVPESREALEALPGVGRK 120 P + +G + L YI+TIGLYRTK K++++TCRIL+++ GGQVP R ALEALPGVGRK Sbjct: 61 PAKMLALGEEGLTAYIKTIGLYRTKCKHILQTCRILLDQYGGQVPRDRAALEALPGVGRK 120 Query: 121 TANVVLNTAFGHPTIAVDTHIFRVSNRTGLAPGKDVDEVERKLIKFVAPEFRQDAHHWLI 180 TANVVLNTAFG PTIAVDTHIFRV+NRTGLAPGK+V EVE KL+K V EFRQDAHHWLI Sbjct: 121 TANVVLNTAFGEPTIAVDTHIFRVANRTGLAPGKNVLEVELKLLKVVPEEFRQDAHHWLI 180 Query: 181 LHGRYTCIARKPQCWNCIIADLCEFKQKTPLP 212 LHGRY C ARKP+CW+C I LCEF+ KTP P Sbjct: 181 LHGRYVCRARKPECWHCAIEPLCEFRPKTPAP 212 >YPO2239 [L] COG0177 Predicted EndoIII-related endonuclease Ype Yersinia pestis Length = 213 Score = 324 bits (830), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 157/208 (75%), Positives = 175/208 (84%) Query: 1 MNPTKRREIFERLRQANPTPTTELEYTTPFELLIAVLLSAQATDVSVNKATRKLYPVANT 60 MN KR I RLR NP PTTEL Y+TPFELLI+VLLSAQATDVSVNKAT +LYPVANT Sbjct: 1 MNKEKRVTILTRLRDNNPHPTTELVYSTPFELLISVLLSAQATDVSVNKATARLYPVANT 60 Query: 61 PEAIYRMGVDQLMPYIQTIGLYRTKAKNVIETCRILIEEQGGQVPESREALEALPGVGRK 120 P+AI +GVD L YI+TIGLY TKA+NVI+TCRIL+E+ G+VPE R ALEALPGVGRK Sbjct: 61 PQAILDLGVDGLKEYIKTIGLYNTKAENVIKTCRILLEKHQGEVPEDRAALEALPGVGRK 120 Query: 121 TANVVLNTAFGHPTIAVDTHIFRVSNRTGLAPGKDVDEVERKLIKFVAPEFRQDAHHWLI 180 TANVVLNTAFG PTIAVDTHIFRV NRTG APG +VD+VE KL+K V EF+ D HHWLI Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVCNRTGFAPGSNVDQVEEKLLKVVPAEFKLDCHHWLI 180 Query: 181 LHGRYTCIARKPQCWNCIIADLCEFKQK 208 LHGRYTCIARKP+C +CII DLCEFK+K Sbjct: 181 LHGRYTCIARKPRCGSCIIEDLCEFKEK 208 >PM0381 [L] COG0177 Predicted EndoIII-related endonuclease Pmu Pasteurella multocida Length = 210 Score = 324 bits (830), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 153/209 (73%), Positives = 176/209 (84%) Query: 1 MNPTKRREIFERLRQANPTPTTELEYTTPFELLIAVLLSAQATDVSVNKATRKLYPVANT 60 MN KR EI RLR NP PTTEL Y++PFELLIAV+LSAQATD VNKAT KL+PVANT Sbjct: 1 MNKQKRIEILTRLRDHNPHPTTELNYSSPFELLIAVILSAQATDKGVNKATEKLFPVANT 60 Query: 61 PEAIYRMGVDQLMPYIQTIGLYRTKAKNVIETCRILIEEQGGQVPESREALEALPGVGRK 120 P+AI +G+D L YI+TIGLY +KA+N+I+TCR LIE+ G++PE+R ALEAL GVGRK Sbjct: 61 PQAILDLGLDGLKEYIKTIGLYNSKAENIIKTCRDLIEKHNGEIPENRSALEALAGVGRK 120 Query: 121 TANVVLNTAFGHPTIAVDTHIFRVSNRTGLAPGKDVDEVERKLIKFVAPEFRQDAHHWLI 180 TANVVLNTAFGHPTIAVDTHIFRVSNRTG APGKDV +VE KL+K V EF+ D HHWLI Sbjct: 121 TANVVLNTAFGHPTIAVDTHIFRVSNRTGFAPGKDVVKVEEKLLKVVPDEFKVDVHHWLI 180 Query: 181 LHGRYTCIARKPQCWNCIIADLCEFKQKT 209 LHGRYTCIARKP+C +C+I DLCEFK+KT Sbjct: 181 LHGRYTCIARKPRCGSCLIEDLCEFKEKT 209 >PA3495 [L] COG0177 Predicted EndoIII-related endonuclease Pae Pseudomonas aeruginosa Length = 212 Score = 323 bits (827), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 156/209 (74%), Positives = 176/209 (84%) Query: 1 MNPTKRREIFERLRQANPTPTTELEYTTPFELLIAVLLSAQATDVSVNKATRKLYPVANT 60 MN KR EIF RL + NP P TEL YTTPFELLIAV+LSAQATDV VNKAT +LYPVANT Sbjct: 1 MNAAKRAEIFRRLHEDNPEPRTELAYTTPFELLIAVILSAQATDVGVNKATARLYPVANT 60 Query: 61 PEAIYRMGVDQLMPYIQTIGLYRTKAKNVIETCRILIEEQGGQVPESREALEALPGVGRK 120 PEAI+ +GV+ L YI+TIGLY +KAKNVIETCRILIE+ GGQVP++RE LEALPGVGRK Sbjct: 61 PEAIHALGVEGLSEYIKTIGLYNSKAKNVIETCRILIEKHGGQVPDNREDLEALPGVGRK 120 Query: 121 TANVVLNTAFGHPTIAVDTHIFRVSNRTGLAPGKDVDEVERKLIKFVAPEFRQDAHHWLI 180 TANVVLNTAF +AVDTHIFRV+NRTG+APGK+V EVE+KL+KFV E+ DAHHWLI Sbjct: 121 TANVVLNTAFRQLAMAVDTHIFRVANRTGIAPGKNVLEVEKKLLKFVPREYLLDAHHWLI 180 Query: 181 LHGRYTCIARKPQCWNCIIADLCEFKQKT 209 LHGRY C ARKPQC +C I DLCE+K KT Sbjct: 181 LHGRYVCKARKPQCGSCRIEDLCEYKHKT 209 >nth [L] COG0177 Predicted EndoIII-related endonuclease Eco Escherichia coli K12 Length = 211 Score = 320 bits (819), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 151/211 (71%), Positives = 177/211 (83%) Query: 1 MNPTKRREIFERLRQANPTPTTELEYTTPFELLIAVLLSAQATDVSVNKATRKLYPVANT 60 MN KR EI RLR+ NP PTTEL +++PFELLIAVLLSAQATDVSVNKAT KLYPVANT Sbjct: 1 MNKAKRLEILTRLRENNPHPTTELNFSSPFELLIAVLLSAQATDVSVNKATAKLYPVANT 60 Query: 61 PEAIYRMGVDQLMPYIQTIGLYRTKAKNVIETCRILIEEQGGQVPESREALEALPGVGRK 120 P A+ +GV+ + YI+TIGLY +KA+N+I+TCRIL+E+ G+VPE R ALEALPGVGRK Sbjct: 61 PAAMLELGVEGVKTYIKTIGLYNSKAENIIKTCRILLEQHNGEVPEDRAALEALPGVGRK 120 Query: 121 TANVVLNTAFGHPTIAVDTHIFRVSNRTGLAPGKDVDEVERKLIKFVAPEFRQDAHHWLI 180 TANVVLNTAFG PTIAVDTHIFRV NRT APGK+V++VE KL+K V EF+ D HHWLI Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVCNRTQFAPGKNVEQVEEKLLKVVPAEFKVDCHHWLI 180 Query: 181 LHGRYTCIARKPQCWNCIIADLCEFKQKTPL 211 LHGRYTCIARKP+C +CII DLCE+K+K + Sbjct: 181 LHGRYTCIARKPRCGSCIIEDLCEYKEKVDI 211