BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0041.0187.p (274 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA3445 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transp... 271 9e-73 ssuA [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transpor... 220 3e-57 ECs1019 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate trans... 217 3e-56 ZycbO [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transpo... 216 3e-56 RSp1383 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate trans... 214 1e-55 >PA3445 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Pae Pseudomonas aeruginosa Length = 323 Score = 271 bits (694), Expect = 9e-73, Method: Compositional matrix adjust. Identities = 151/291 (51%), Positives = 181/291 (62%), Gaps = 56/291 (19%) Query: 37 VQAQE--TKLLRIGYQKAANTLVLLKAHGTLEKRLQPLGVEVKWAEFAAGPQLLEALNVG 94 VQA E LRIGYQK TLVLLKA GTLEKRL GV+V+W EF GPQLLE LNVG Sbjct: 22 VQADEKSANTLRIGYQKYG-TLVLLKARGTLEKRLAEDGVKVQWTEFPGGPQLLEGLNVG 80 Query: 95 SVDFGYVGEAPPVFAQAAGADFVYTAYEIPTPDAEGLLVQKNSPIKSVAELKGKKIAFNK 154 S+DFG GE PPVFAQAAGAD +Y AYE P P +E +L+ K+SPI+SVAELKG+K+A NK Sbjct: 81 SIDFGVTGETPPVFAQAAGADLLYVAYEPPAPTSEAILLPKDSPIRSVAELKGRKVALNK 140 Query: 155 GSDVHWLVVALLKKAGLQYSDIQPVYLAPADARAAFERGAVDAWAIWDPFQAAXTAQAAA 214 GS+VH+L+V L++AGL+YSDIQPVYL PADARAAFER +VDAW IWDP+QAA Q +A Sbjct: 141 GSNVHYLLVRALEQAGLKYSDIQPVYLPPADARAAFERHSVDAWVIWDPYQAAAEKQLSA 200 Query: 215 -----------------------------------------------------QLAPIQG 221 Q+AP+ G Sbjct: 201 RVLVDGRELVDNHQFYLATRTYAQRHPQVLDKLVDEIREVGDWSRANPQQVTEQVAPLLG 260 Query: 222 LDADIIETGLKRYAHVYKPVDAQVLAEQQKIADAFYELKLIPKPLKVSDAV 272 L ADI T +KR + + + V+ QQKIAD F +LKLIPKPL + D + Sbjct: 261 LPADITLTAVKRQGYGAQLITPAVVEAQQKIADTFTQLKLIPKPLSIKDVI 311 >ssuA [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Eco Escherichia coli K12 Length = 333 Score = 220 bits (561), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 125/282 (44%), Positives = 160/282 (56%), Gaps = 56/282 (19%) Query: 45 LRIGYQKAANTLVLLKAHGTLEKRLQPLGVEVKWAEFAAGPQLLEALNVGSVDFGYVGEA 104 LRIGYQK + +VL K+H LEKR ++ W EF AGPQ+LEALNVGS+D G G+ Sbjct: 43 LRIGYQKGSIGMVLAKSHQLLEKRYPE--SKISWVEFPAGPQMLEALNVGSIDLGSTGDI 100 Query: 105 PPVFAQAAGADFVYTAYEIPTPDAEGLLVQKNSPIKSVAELKGKKIAFNKGSDVHWLVVA 164 PP+FAQAAGAD VY E P P AE +LV +NSPIK+VA+LKG K+AF KGS H L++ Sbjct: 101 PPIFAQAAGADLVYVGVEPPKPKAEVILVAENSPIKTVADLKGHKVAFQKGSSSHNLLLR 160 Query: 165 LLKKAGLQYSDIQPVYLAPADARAAFERGAVDAWAIWDPFQAAXTAQAA----------- 213 L++AGL+++DIQP YL PADARAAF++G VDAWAIWDP+ +A Q Sbjct: 161 ALRQAGLKFTDIQPTYLTPADARAAFQQGNVDAWAIWDPYYSAALLQGGVRVLKDGTDLN 220 Query: 214 ------------------------------------------AQLAPIQGLDADIIETGL 231 A LA GL A +I + L Sbjct: 221 QTGSFYLAARPYAEKNGAFIQGVLATFSEADALTRSQREQSIALLAKTMGLPAPVIASYL 280 Query: 232 -KRYAHVYKPVDAQVLAEQQKIADAFYELKLIPKPLKVSDAV 272 R KPV+A+V A QQ+ AD FYE +L+PK + + + Sbjct: 281 DHRPPTTIKPVNAEVAALQQQTADLFYENRLVPKKVDIRQRI 322 >ECs1019 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Ecs Escherichia coli O157:H7 Length = 319 Score = 217 bits (552), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 126/304 (41%), Positives = 169/304 (55%), Gaps = 62/304 (20%) Query: 23 IALGALTIALGASPVQAQETKLLRIGYQKAANTLVLLKAHGTLEKRLQPLGVEVKWAEFA 82 +++ + +A +SP + LRIGYQK + +VL K+H LEKR ++ W EF Sbjct: 13 LSVSTIVVAAESSP------EALRIGYQKGSIGMVLAKSHQLLEKRYP--QSKISWVEFP 64 Query: 83 AGPQLLEALNVGSVDFGYVGEAPPVFAQAAGADFVYTAYEIPTPDAEGLLVQKNSPIKSV 142 AGPQ+LEALNVGS+D G G+ PP+FAQAAGAD +Y E P P AE +LV +NSPIK+ Sbjct: 65 AGPQMLEALNVGSIDLGSTGDIPPIFAQAAGADLLYVGVEPPKPKAEVILVAENSPIKTA 124 Query: 143 AELKGKKIAFNKGSDVHWLVVALLKKAGLQYSDIQPVYLAPADARAAFERGAVDAWAIWD 202 A+LKG K+AF KGS H L++ L++AGL+++DIQP YL PADARAAF++G VDAWAIWD Sbjct: 125 ADLKGHKVAFQKGSSSHNLLLRALRQAGLKFTDIQPTYLTPADARAAFQQGNVDAWAIWD 184 Query: 203 PFQAAXTAQAA------------------------------------------------- 213 P+ +A Q Sbjct: 185 PYYSAALLQGGVRVLKDGTDLNQTGSFYLAARPYAEKNGAFIQGVLATFSEADALTRSQR 244 Query: 214 ----AQLAPIQGLDADIIETGL-KRYAHVYKPVDAQVLAEQQKIADAFYELKLIPKPLKV 268 A LA GL A +I + L R KPV+A+V A QQ+ AD FYE +L+PK + + Sbjct: 245 EQSIALLAKTMGLPAPVIASYLDHRPPTTIKPVNAEVAALQQQTADLFYENRLVPKKVDI 304 Query: 269 SDAV 272 + Sbjct: 305 RQRI 308 >ZycbO [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components EcZ Escherichia coli O157:H7 EDL933 Length = 333 Score = 216 bits (551), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 126/304 (41%), Positives = 169/304 (55%), Gaps = 62/304 (20%) Query: 23 IALGALTIALGASPVQAQETKLLRIGYQKAANTLVLLKAHGTLEKRLQPLGVEVKWAEFA 82 +++ + +A +SP + LRIGYQK + +VL K+H LEKR ++ W EF Sbjct: 27 LSVSTIVVAAESSP------EALRIGYQKGSIGMVLAKSHQLLEKRYP--QSKISWVEFP 78 Query: 83 AGPQLLEALNVGSVDFGYVGEAPPVFAQAAGADFVYTAYEIPTPDAEGLLVQKNSPIKSV 142 AGPQ+LEALNVGS+D G G+ PP+FAQAAGAD +Y E P P AE +LV +NSPIK+ Sbjct: 79 AGPQMLEALNVGSIDLGSTGDIPPIFAQAAGADLLYVGVEPPKPKAEVILVAENSPIKTA 138 Query: 143 AELKGKKIAFNKGSDVHWLVVALLKKAGLQYSDIQPVYLAPADARAAFERGAVDAWAIWD 202 A+LKG K+AF KGS H L++ L++AGL+++DIQP YL PADARAAF++G VDAWAIWD Sbjct: 139 ADLKGHKVAFQKGSSSHNLLLRALRQAGLKFTDIQPTYLTPADARAAFQQGNVDAWAIWD 198 Query: 203 PFQAAXTAQAA------------------------------------------------- 213 P+ +A Q Sbjct: 199 PYYSAALLQGGVRVLKDGTDLNQTGSFYLAARPYAEKNGAFIQGVLATFSEADALTRSQR 258 Query: 214 ----AQLAPIQGLDADIIETGL-KRYAHVYKPVDAQVLAEQQKIADAFYELKLIPKPLKV 268 A LA GL A +I + L R KPV+A+V A QQ+ AD FYE +L+PK + + Sbjct: 259 EQSIALLAKTMGLPAPVIASYLDHRPPTTIKPVNAEVAALQQQTADLFYENRLVPKKVDI 318 Query: 269 SDAV 272 + Sbjct: 319 RQRI 322 >RSp1383 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Rso Ralstonia solanacearum Length = 334 Score = 214 bits (546), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 124/283 (43%), Positives = 160/283 (56%), Gaps = 54/283 (19%) Query: 45 LRIGYQKAANTLVLLKAHGTLEKRLQPLGVEVKWAEFAAGPQLLEALNVGSVDFGYVGEA 104 +RIG+QKA L +LKA G L+ L LG ++W EF AGPQLLEALN GS+DFGY G Sbjct: 44 VRIGFQKA-GLLAVLKAQGALDTPLAELGYRIEWKEFPAGPQLLEALNAGSIDFGYTGAP 102 Query: 105 PPVFAQAAGADFVYTAYEIPTPDAEGLLVQKNSPIKSVAELKGKKIAFNKGSDVHWLVVA 164 P VFAQAAGA FVY E E L V+ SP + VA+LKGK+IA KGS ++L+V Sbjct: 103 PAVFAQAAGARFVYVGAEPGASANEALFVRDGSPARGVADLKGKRIALQKGSSSNYLLVQ 162 Query: 165 LLKKAGLQYSDIQPVYLAPADARAAFERGAVDAWAIWDPFQA-AXTA------------- 210 LLK+AGL DIQP+YL PA+ARAAFE GAVDAW +WDP+ A A TA Sbjct: 163 LLKRAGLTVQDIQPIYLPPAEARAAFESGAVDAWVVWDPYYALAQTALKVRTLADYTGLP 222 Query: 211 ---------------------------------------QAAAQLAPIQGLDADIIETGL 231 + AA L+P G+ ++ET L Sbjct: 223 SPFNFYEATPGFVQAHPRAVNAILAQLRTTGLWVNRHPRETAALLSPKLGIAPPVVETWL 282 Query: 232 KRYAHVYKPVDAQVLAEQQKIADAFYELKLIPKPLKVSDAVLK 274 +R + P+ +V+A QQ++AD F++ KLIP+P+ V AV + Sbjct: 283 RRVPYGVTPITPEVIAAQQQVADLFHQQKLIPRPVSVQGAVWR 325