BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0041.0185.p (279 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA3443 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transp... 333 3e-91 YPO3626 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate trans... 333 3e-91 RSc1340 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate trans... 320 3e-87 ssuC [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transpor... 312 5e-85 ZycbM [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transpo... 307 1e-83 >PA3443 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Pae Pseudomonas aeruginosa Length = 262 Score = 333 bits (853), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 164/243 (67%), Positives = 202/243 (83%) Query: 37 WLLPLLLLVWWEVAAQAGWLSSRILPEPLAVLKAAWELSASGELWRHLAVSSGRAASGFA 96 W LPL+LL W+ A + GWLSSRILP P AVL+A W L SGE+W+HLA+S RAA GF Sbjct: 14 WALPLVLLAVWQAAVEFGWLSSRILPAPSAVLEAGWALLRSGEIWQHLAISGWRAAIGFL 73 Query: 97 VGAGLGLILGLLSGSLRSAELLLDTTLQMVRNIPALALIPLVILWFGIDETAKLFLVSVG 156 +G +GL+LG ++G + E LD+++QM+RN+P LALIPLVILWFGIDE+AK+FLV++G Sbjct: 74 IGGAIGLVLGFVTGLSKWGERFLDSSVQMIRNVPHLALIPLVILWFGIDESAKIFLVALG 133 Query: 157 VFFPVYLNTFHGIRSVDQGLIEMAKSYGLSGWPLYRDVILPGALPAILVGLRFALGLVWV 216 FP+YLNT+HGIR +D GL+EMA+SYGLSG+ L+R VILPGALP+ILVG+RFALG +W+ Sbjct: 134 TLFPIYLNTYHGIRGIDPGLLEMARSYGLSGFALFRQVILPGALPSILVGVRFALGFMWL 193 Query: 217 LLIVAETISAQAGIGYMTMNAREFLQTDVVLVGILLYALLGKLADTAARWLERFWLRWHP 276 LIVAETISA +GIGY+ MNAREFLQTDVV++ ILLYA+LGKLAD AAR LER WLRWHP Sbjct: 194 TLIVAETISASSGIGYLAMNAREFLQTDVVVLAILLYAVLGKLADLAARGLERVWLRWHP 253 Query: 277 GYQ 279 YQ Sbjct: 254 AYQ 256 >YPO3626 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Ype Yersinia pestis Length = 265 Score = 333 bits (853), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 159/243 (65%), Positives = 206/243 (84%) Query: 37 WLLPLLLLVWWEVAAQAGWLSSRILPEPLAVLKAAWELSASGELWRHLAVSSGRAASGFA 96 W+LP+ L+V W+VA +AGWLS+RILP P AV+ A W L+ SGELW+HL +SS RA GF+ Sbjct: 16 WILPVALVVGWQVAVEAGWLSNRILPAPSAVVTAFWALTKSGELWQHLTISSWRALIGFS 75 Query: 97 VGAGLGLILGLLSGSLRSAELLLDTTLQMVRNIPALALIPLVILWFGIDETAKLFLVSVG 156 +G +GL+LG+++G R E LL++++QM+RN+P LALIPLVILWFGIDE+AK+FLV++G Sbjct: 76 IGGSIGLVLGVITGLSRWGERLLNSSVQMIRNVPHLALIPLVILWFGIDESAKIFLVALG 135 Query: 157 VFFPVYLNTFHGIRSVDQGLIEMAKSYGLSGWPLYRDVILPGALPAILVGLRFALGLVWV 216 FP+YLNT+HGI+++D GL+EMA+SYGLSG+ L V+LPGALP+I+VG+RFALG +W+ Sbjct: 136 TLFPIYLNTYHGIKNIDSGLLEMARSYGLSGFRLLTQVVLPGALPSIMVGVRFALGFMWL 195 Query: 217 LLIVAETISAQAGIGYMTMNAREFLQTDVVLVGILLYALLGKLADTAARWLERFWLRWHP 276 LIVAETISA +GIGY+ MNAREFLQTDVV+V I+LYALLGKLAD +A+ LER WLRWHP Sbjct: 196 TLIVAETISANSGIGYLAMNAREFLQTDVVVVAIVLYALLGKLADGSAQLLERVWLRWHP 255 Query: 277 GYQ 279 YQ Sbjct: 256 AYQ 258 >RSc1340 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Rso Ralstonia solanacearum Length = 264 Score = 320 bits (819), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 191/258 (74%), Positives = 219/258 (84%), Gaps = 6/258 (2%) Query: 22 KAARKSFQPSHAWIGWLLPLLLLVWWEVAAQAGWLSSRILPEPLAVLKAAWELSASGELW 81 KAAR P WL+PL LL W+ AAQ GWLS+RILP PL V ++A EL+ SGELW Sbjct: 10 KAARARLTP------WLVPLALLAAWQAAAQWGWLSNRILPAPLDVARSAIELARSGELW 63 Query: 82 RHLAVSSGRAASGFAVGAGLGLILGLLSGSLRSAELLLDTTLQMVRNIPALALIPLVILW 141 +H+AVS+ RA GFA+G LGL LGLL+G+ R+AE LLDTTLQM+RNIP LALIPLVILW Sbjct: 64 KHVAVSTWRALLGFAIGGSLGLALGLLTGTFRTAETLLDTTLQMIRNIPVLALIPLVILW 123 Query: 142 FGIDETAKLFLVSVGVFFPVYLNTFHGIRSVDQGLIEMAKSYGLSGWPLYRDVILPGALP 201 FGIDE+AKLFLVS+GVFFP+YLNT+HGIR+VD L+EMA+SYGLS LYR+VILPGALP Sbjct: 124 FGIDESAKLFLVSLGVFFPIYLNTYHGIRAVDPALVEMARSYGLSRARLYREVILPGALP 183 Query: 202 AILVGLRFALGLVWVLLIVAETISAQAGIGYMTMNAREFLQTDVVLVGILLYALLGKLAD 261 ILVG+RF+LGL+WV LIVAET+SAQAGIGYMTMNAREFLQTDVVL+GILLYALLGKLAD Sbjct: 184 QILVGVRFSLGLMWVTLIVAETVSAQAGIGYMTMNAREFLQTDVVLLGILLYALLGKLAD 243 Query: 262 TAARWLERFWLRWHPGYQ 279 +R LERFWLRWHPGYQ Sbjct: 244 LLSRALERFWLRWHPGYQ 261 >ssuC [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Eco Escherichia coli K12 Length = 278 Score = 312 bits (799), Expect = 5e-85, Method: Compositional matrix adjust. Identities = 172/275 (62%), Positives = 216/275 (78%), Gaps = 7/275 (2%) Query: 6 NPVAGRVAGPQEQAKP-KAARKSFQPSHAWIGWLLPLLLLVWWEVAAQAGWLSSRILPEP 64 +PV R A + A P K P W LP+ ++ W++A+ GWLS+RILP P Sbjct: 4 SPVKSRKAKEEIMATPVKKWLLRVAP------WFLPVGIVAVWQLASSVGWLSTRILPSP 57 Query: 65 LAVLKAAWELSASGELWRHLAVSSGRAASGFAVGAGLGLILGLLSGSLRSAELLLDTTLQ 124 V+ A W LSASGELW+HLA+SS RA GF++G LGLILGL+SG R E LLDT++Q Sbjct: 58 EGVVTAFWTLSASGELWQHLAISSWRALIGFSIGGSLGLILGLISGLSRWGERLLDTSIQ 117 Query: 125 MVRNIPALALIPLVILWFGIDETAKLFLVSVGVFFPVYLNTFHGIRSVDQGLIEMAKSYG 184 M+RN+P LALIPLVILWFGIDE+AK+FLV++G FP+Y+NT+HGIR++D+GL+EMA+SYG Sbjct: 118 MLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYG 177 Query: 185 LSGWPLYRDVILPGALPAILVGLRFALGLVWVLLIVAETISAQAGIGYMTMNAREFLQTD 244 LSG PL+ VILPGALP+I+VG+RFALGL+W+ LIVAETISA +GIGY+ MNAREFLQTD Sbjct: 178 LSGIPLFIHVILPGALPSIMVGVRFALGLMWLTLIVAETISANSGIGYLAMNAREFLQTD 237 Query: 245 VVLVGILLYALLGKLADTAARWLERFWLRWHPGYQ 279 VV+V I+LYALLGKLAD +A+ LER WLRW+P Y Sbjct: 238 VVVVAIILYALLGKLADVSAQLLERLWLRWNPAYH 272 >ZycbM [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component EcZ Escherichia coli O157:H7 EDL933 Length = 263 Score = 307 bits (787), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 163/243 (67%), Positives = 205/243 (84%) Query: 37 WLLPLLLLVWWEVAAQAGWLSSRILPEPLAVLKAAWELSASGELWRHLAVSSGRAASGFA 96 W LP+ ++ W++A+ GWLS+RILP P V+ A W LSASGELW+HLA+SS RA F+ Sbjct: 15 WFLPVGIVTVWQLASSVGWLSTRILPSPEGVVMAFWTLSASGELWQHLAISSWRALIVFS 74 Query: 97 VGAGLGLILGLLSGSLRSAELLLDTTLQMVRNIPALALIPLVILWFGIDETAKLFLVSVG 156 +G LGLILGL+SG R E LLDT++QM+RN+P LALIPLVILWFGIDE+AK+FLV++G Sbjct: 75 IGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGIDESAKIFLVALG 134 Query: 157 VFFPVYLNTFHGIRSVDQGLIEMAKSYGLSGWPLYRDVILPGALPAILVGLRFALGLVWV 216 FP+Y+NT+HGIR++D+GL+EMA+SYGLSG PL+ VILPGALP+I+VG+RFALGL+W+ Sbjct: 135 TLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALGLMWL 194 Query: 217 LLIVAETISAQAGIGYMTMNAREFLQTDVVLVGILLYALLGKLADTAARWLERFWLRWHP 276 LIVAETISA +GIGY+ MNAREFLQTDVV+V I+LYALLGKLAD +A+ LER WLRW+P Sbjct: 195 TLIVAETISANSGIGYLAMNAREFLQTDVVVVAIILYALLGKLADVSAQLLERLWLRWNP 254 Query: 277 GYQ 279 Y Sbjct: 255 AYH 257