BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0041.0072.p         (155 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSp1185 [E] COG3616 Predicted amino acid aldolase or racemase Rs...   253   1e-67
mll6666 [E] COG3616 Predicted amino acid aldolase or racemase Ml...   123   1e-28
AGpA328 [E] COG3616 Predicted amino acid aldolase or racemase At...    99   4e-21

>RSp1185 [E] COG3616 Predicted amino acid aldolase or racemase Rso Ralstonia
           solanacearum
          Length = 425

 Score =  253 bits (645), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 116/155 (74%), Positives = 133/155 (85%), Gaps = 1/155 (0%)

Query: 1   LDVVLRPGCYLTHDVGIYRAAQAQIQVRNPVAHSMRSQLQPALQLWAYVQSIPEADKAII 60
            D VLRPGCYLTHDVGIY+AAQAQI VRNPVAH MRS L PALQ+WAYVQS+PE ++AI+
Sbjct: 272 FDPVLRPGCYLTHDVGIYKAAQAQINVRNPVAHRMRSSLLPALQVWAYVQSVPEPERAIV 331

Query: 61  ALGKRDAAFDAGLPMPVSRFRPGRDTGPQATPAHWEVTGMMDQHAYLKIAAGDDIEVGDM 120
           ALGKRDAAFDAG P P  R+RPG +  P   PAHWEVTGMMDQHAYL+IAAGDDI+VGDM
Sbjct: 332 ALGKRDAAFDAGFPQPAQRYRPG-EASPTDVPAHWEVTGMMDQHAYLRIAAGDDIKVGDM 390

Query: 121 LAFDISHPCLTFDKWRHLVVVDARFDVTDIVQTFF 155
           +AFDISHPCLTFDKWR + V+D  ++V D+VQT+F
Sbjct: 391 IAFDISHPCLTFDKWRQIPVIDDAYNVVDVVQTYF 425


>mll6666 [E] COG3616 Predicted amino acid aldolase or racemase Mlo
           Mesorhizobium loti
          Length = 420

 Score =  123 bits (309), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 62/153 (40%), Positives = 90/153 (58%), Gaps = 6/153 (3%)

Query: 3   VVLRPGCYLTHDVGIYRAAQAQIQVRNPVAHSMRSQLQPALQLWAYVQSIPEADKAIIAL 62
           VV R GCY+THD G+YR A  ++Q +      +R     AL++W YVQSIPE   A++  
Sbjct: 274 VVTRSGCYVTHDSGLYRIAHQRLQAKIGEQDGLRR----ALEIWTYVQSIPEPGLALLTA 329

Query: 63  GKRDAAFDAGLPMPVSRFRPGRDTGPQATPAHWEVTGMMDQHAYLKIAAGDDIEVGDMLA 122
           G+RD   D+G P+P+     G    P+  P   EV  + DQHAY++      + VGD + 
Sbjct: 330 GRRDCGTDSGFPVPLLLSSAG--AYPRDLPPGCEVINLNDQHAYMRFPPDLPLAVGDRVG 387

Query: 123 FDISHPCLTFDKWRHLVVVDARFDVTDIVQTFF 155
             ISHPC TFDKW+ + +VD+ + V + ++TFF
Sbjct: 388 LGISHPCTTFDKWQIIYLVDSDYRVIEAMKTFF 420


>AGpA328 [E] COG3616 Predicted amino acid aldolase or racemase Atu
           Agrobacterium tumefaciens strain C58 (Cereon)
          Length = 423

 Score = 98.6 bits (244), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 80/158 (50%), Gaps = 6/158 (3%)

Query: 3   VVLRPGCYLTHDVGIYRAAQAQIQVRNPVAHS-----MRSQLQPALQLWAYVQSIPEADK 57
           ++LR G     D G+Y+     +  RN +A            QP++++WA V S+PE   
Sbjct: 266 LLLRSGAIFFSDHGVYQRGFQAVDARNLLASGKVVFKASEAFQPSMRIWAEVISVPEPGL 325

Query: 58  AIIALGKRDAAFDAGLPMPVSRFRPGRDTGPQATPAHWEVTGMMDQHAYLKIAAGDDIEV 117
           AI+ +G RD +FD  LP+ +   R G       + +  +V  + DQHA+L    G  + +
Sbjct: 326 AIVGMGMRDVSFDQDLPVALRLHRDGHLVEADLSSS-AKVGKLNDQHAFLSFGNGSSLAI 384

Query: 118 GDMLAFDISHPCLTFDKWRHLVVVDARFDVTDIVQTFF 155
           GD++ F ISHPC  FD+WR    +D    +  I  TFF
Sbjct: 385 GDVIEFGISHPCTCFDRWRVFHGIDGSGRIQRIYTTFF 422