BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0041.0050.p         (65 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc2062 [C] COG0838 NADH Rso Ralstonia solanacearum                   107   4e-24
BMEI1158 [C] COG0838 NADH Bme Brucella melitensis                      90   1e-18
SMc01912 [C] COG0838 NADH Sme Sinorhizobium meliloti                   90   2e-18
AGc2340 [C] COG0838 NADH Atu Agrobacterium tumefaciens strain C5...    89   3e-18
NMB0241 [C] COG0838 NADH Nme Neisseria meningitidis MC58               87   8e-18

>RSc2062 [C] COG0838 NADH Rso Ralstonia solanacearum
          Length = 119

 Score =  107 bits (268), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 52/65 (80%), Positives = 58/65 (89%)

Query: 1   MKFDVRYYLIAILFILFDLETAFFFPWGVSMRELGWQGFVTMMVFIAEFVVGFWYIWKKG 60
           MKFDVRYYLIAILFILFDLETAF FPWGV++R++GW GF  M VF+ EF+VGF YIWKKG
Sbjct: 55  MKFDVRYYLIAILFILFDLETAFLFPWGVALRDIGWPGFFAMGVFLLEFLVGFVYIWKKG 114

Query: 61  ALDWE 65
           ALDWE
Sbjct: 115 ALDWE 119


>BMEI1158 [C] COG0838 NADH Bme Brucella melitensis
          Length = 121

 Score = 89.7 bits (221), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 40/65 (61%), Positives = 53/65 (81%)

Query: 1   MKFDVRYYLIAILFILFDLETAFFFPWGVSMRELGWQGFVTMMVFIAEFVVGFWYIWKKG 60
           MKFD+R+YL++ILFI+FDLE AF FPW VS  ++GW GF++MMVF+    +GF Y WKKG
Sbjct: 57  MKFDIRFYLVSILFIIFDLEVAFLFPWAVSFGQIGWFGFLSMMVFLGVLTIGFIYEWKKG 116

Query: 61  ALDWE 65
           AL+W+
Sbjct: 117 ALEWD 121


>SMc01912 [C] COG0838 NADH Sme Sinorhizobium meliloti
          Length = 121

 Score = 89.7 bits (221), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 43/65 (66%), Positives = 52/65 (80%)

Query: 1   MKFDVRYYLIAILFILFDLETAFFFPWGVSMRELGWQGFVTMMVFIAEFVVGFWYIWKKG 60
           MKFDVR+YL++ILFI+FDLE AF FPW VS +E+GW GF +MMVF+    VGF Y WKKG
Sbjct: 57  MKFDVRFYLVSILFIIFDLEVAFLFPWAVSFKEMGWFGFWSMMVFLLVLTVGFIYEWKKG 116

Query: 61  ALDWE 65
           AL+W 
Sbjct: 117 ALEWN 121


>AGc2340 [C] COG0838 NADH Atu Agrobacterium tumefaciens strain C58 (Cereon)
          Length = 121

 Score = 89.0 bits (219), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 42/64 (65%), Positives = 52/64 (81%)

Query: 1   MKFDVRYYLIAILFILFDLETAFFFPWGVSMRELGWQGFVTMMVFIAEFVVGFWYIWKKG 60
           MKFD+R+YL++ILFI+FDLE AF FPW VS  E+GW GF +MMVF+A   +GF Y WKKG
Sbjct: 57  MKFDIRFYLVSILFIIFDLEVAFLFPWAVSFGEMGWFGFWSMMVFLAVLTIGFIYEWKKG 116

Query: 61  ALDW 64
           AL+W
Sbjct: 117 ALEW 120


>NMB0241 [C] COG0838 NADH Nme Neisseria meningitidis MC58
          Length = 118

 Score = 87.4 bits (215), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 44/65 (67%), Positives = 50/65 (76%)

Query: 1   MKFDVRYYLIAILFILFDLETAFFFPWGVSMRELGWQGFVTMMVFIAEFVVGFWYIWKKG 60
           MKFDVRYYL+AILFILFDLE AF  PW V  ++LG  GF +M+VFI    VGF Y WKKG
Sbjct: 54  MKFDVRYYLVAILFILFDLEVAFMLPWAVVFKDLGAYGFWSMLVFIVVLTVGFVYEWKKG 113

Query: 61  ALDWE 65
           AL+WE
Sbjct: 114 ALEWE 118