BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0041.0022.p         (156 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc1907 [K] COG1396 Predicted transcriptional regulators Rso Ral...    66   3e-11

>RSc1907 [K] COG1396 Predicted transcriptional regulators Rso Ralstonia
           solanacearum
          Length = 173

 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 54/93 (58%), Gaps = 1/93 (1%)

Query: 1   LAKERSRCGHTQKSIADNLDITARTQIKYEIGETAPDAYYLHGLDAIGIDVTYVLTGVR- 59
           L +ER R G +Q + A     +  +Q+ +E G   P+A +LH +  +G+DV YV+TG R 
Sbjct: 29  LKEERERLGFSQPAFAAIGGASKGSQLAWEKGTAMPNAEFLHDVARVGVDVLYVITGRRD 88

Query: 60  GATPSPEESQLIACYRSVDKATRSALTQLLAGM 92
            A  SP+E  ++A YR +D   R+ +  L+ GM
Sbjct: 89  SALTSPDEEMVLAGYRQLDARGRTGVLALIGGM 121