BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0041.0011.p (204 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA3945 [J] COG1670 Acetyltransferases, including N-acetylases of... 208 7e-54 PA3944 [J] COG1670 Acetyltransferases, including N-acetylases of... 195 5e-50 mlr1450 [J] COG1670 Acetyltransferases, including N-acetylases o... 151 1e-36 SMc01437 [J] COG1670 Acetyltransferases, including N-acetylases ... 135 7e-32 lin1339 [J] COG1670 Acetyltransferases, including N-acetylases o... 134 1e-31 >PA3945 [J] COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins Pae Pseudomonas aeruginosa Length = 196 Score = 208 bits (529), Expect = 7e-54, Method: Compositional matrix adjust. Identities = 104/181 (57%), Positives = 126/181 (69%) Query: 9 SPLLRGPRVLLRRWRASDRAPMAAINADAQVMQHFPAPLSRQESDALIDRIEAHFAQHGF 68 SP L R++LR W DRA A +NAD VM+ FP+ L R +SDAL+ RI+AHFA+HGF Sbjct: 14 SPRLYTHRLILRPWLVQDRARFAELNADPLVMEFFPSCLDRAQSDALLRRIDAHFAEHGF 73 Query: 69 GAWALEIPGVTEFAGLVGLMRVAFAAPFTPAVEIGWRLAPACWGQGYASEAARCALRYGF 128 G WAL++ G F G VGL V F APF PAV IGWRLA W +G+A EAA AL Y F Sbjct: 74 GWWALQVKGGDPFIGYVGLEVVDFDAPFVPAVAIGWRLAAEHWAEGFAHEAAEAALSYAF 133 Query: 129 ETLELAQIVSFTVPENQRSLAVMQRLGMQCDVREDFLHPRLPPGHRLRLHRLYRIERQQW 188 +TL L Q+V+FTVP N+ SL +M+RLGM D +DF HP LPPGHRLR H LYR+ R+ W Sbjct: 134 DTLGLDQVVAFTVPANENSLGLMERLGMHRDPTDDFEHPDLPPGHRLRHHVLYRLTREDW 193 Query: 189 L 189 L Sbjct: 194 L 194 >PA3944 [J] COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins Pae Pseudomonas aeruginosa Length = 192 Score = 195 bits (496), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 99/187 (52%), Positives = 124/187 (66%), Gaps = 2/187 (1%) Query: 2 VPPPAPESPLLRGPRVLLRRWRASDRAPMAAINADAQVMQHFPAPLSRQESDALIDRIEA 61 +PP A L GPR+LLR WR SDR A + AD QVM+ FP+ L R +SDAL+DR++A Sbjct: 5 LPPSAISE--LHGPRLLLRAWRDSDREAFAEMCADPQVMEFFPSVLDRAQSDALVDRVQA 62 Query: 62 HFAQHGFGAWALEIPGVTEFAGLVGLMRVAFAAPFTPAVEIGWRLAPACWGQGYASEAAR 121 HFA+ G+G WALE+PG F G GL V F P VEIGWRLAPA WG+G A EAA Sbjct: 63 HFAERGYGPWALELPGEAAFIGFTGLFDVTMDVHFAPTVEIGWRLAPAYWGRGLAREAAE 122 Query: 122 CALRYGFETLELAQIVSFTVPENQRSLAVMQRLGMQCDVREDFLHPRLPPGHRLRLHRLY 181 AL + FE L L ++V+FT P N+RS +M+RLGM+ D EDF HP L H +R H LY Sbjct: 123 TALDFAFERLRLPEVVAFTTPPNRRSWGLMERLGMRRDPAEDFDHPLLAADHPMRRHILY 182 Query: 182 RIERQQW 188 R++ +W Sbjct: 183 RVDAARW 189 >mlr1450 [J] COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins Mlo Mesorhizobium loti Length = 190 Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 82/185 (44%), Positives = 107/185 (57%), Gaps = 4/185 (2%) Query: 12 LRGPRVLLRRWRASDRAPMAAINADAQVMQHFPAPLSRQESDALIDRIEAHFAQHGFGAW 71 +R R++LR W DR IN+D +VM+ FP R +DA +D A + G+G Sbjct: 4 MRTERLILRNWEERDRELFHRINSDERVMEFFPFRRDRAAADAKMDEFRAWIDEDGYGFA 63 Query: 72 ALEIPGVTEFAGLVGLMRVAFAAPFTPA--VEIGWRLAPACWGQGYASEAARCALRYGFE 129 A EI E G VGL+ P PA +EIGWRLAP WG+GY +EA+ L YGF+ Sbjct: 64 AAEIAATGECIGFVGLLDTDHV-PSLPAGTIEIGWRLAPEFWGKGYVTEASEAWLAYGFK 122 Query: 130 TLELAQIVSFTVPENQRSLAVMQRLGMQCDVREDFLHPRLPPGH-RLRLHRLYRIERQQW 188 TL + +IVSF V N RS AVM+RLGM D DF HP +P H L+ H LYR+ R+ W Sbjct: 123 TLAVDEIVSFAVAANHRSTAVMKRLGMTADPAADFDHPDIPDSHPALKRHVLYRLSREDW 182 Query: 189 LAQNR 193 A+ + Sbjct: 183 QARKK 187 >SMc01437 [J] COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins Sme Sinorhizobium meliloti Length = 191 Score = 135 bits (339), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 79/181 (43%), Positives = 100/181 (55%), Gaps = 4/181 (2%) Query: 11 LLRGPRVLLRRWRASDRAPMAAINADAQVMQHFPAPLSRQESDALIDRIEAHFAQHGFGA 70 +L R+ LR W +DR A IN+D VM+ FP +R E+DAL DR + + GFG Sbjct: 3 ILETGRLRLRAWIETDRELFAEINSDPAVMEFFPFRRTRAEADALFDRNNRNIRETGFGF 62 Query: 71 WALEIPGVTEFAGLVGLMRVAFAAPFTP--AVEIGWRLAPACWGQGYASEAARCALRYGF 128 +AL G GL R P P VEIGWRLA WG+GY +EAAR L YGF Sbjct: 63 FALAFRENDAPIGFCGLARTDLE-PHLPDGTVEIGWRLALRHWGKGYVTEAARALLDYGF 121 Query: 129 ETLELAQIVSFTVPENQRSLAVMQRLGMQCDVREDFLHPRLPPGH-RLRLHRLYRIERQQ 187 +L +IV+ VP N RS AVM R+GM+ D + DF H +P H LR H LY ++ Sbjct: 122 SERKLGEIVAIAVPANTRSTAVMTRIGMRPDSKRDFDHSGVPDTHPHLRRHVLYATTAEE 181 Query: 188 W 188 W Sbjct: 182 W 182 >lin1339 [J] COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins Lin Listeria innocua Length = 173 Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 65/167 (38%), Positives = 96/167 (57%), Gaps = 2/167 (1%) Query: 16 RVLLRRWRASDRAPMAAINADAQVMQHFPAPLSRQESDALIDRIEAHFAQHGFGAWALEI 75 R++ R + ASD P + +N D VM++FP+ LS++ES+A ++R + G+G +A+E Sbjct: 8 RLIARDYVASDYVPFSEMNGDKVVMKYFPSTLSKEESNAFLERNQQELTALGYGLFAIEE 67 Query: 76 PGVTEFAGLVGLMRVAFAAPFTPAVEIGWRLAPACWGQGYASEAARCALRYGFETLELAQ 135 EF G G F A FTP +EIGWRL + W QGYA+EAA AL + + + + Sbjct: 68 KSTGEFIGFTGFHEATFEAAFTPCIEIGWRLKKSVWNQGYATEAALGALDFAKQKTTIDE 127 Query: 136 IVSFTVPENQRSLAVMQRLGMQCDVREDFLHPRLPPGHRLRLHRLYR 182 I SFT N+ S VM+++ F+HP L GH L+ H LY+ Sbjct: 128 IYSFTAVLNKPSEQVMKKIHFTKVAT--FMHPALADGHPLKPHILYK 172