BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0039.0296.p         (53 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc2331 [L] COG2801 Transposase and inactivated derivatives Rso ...    75   4e-14
RSc1830 [L] COG2801 Transposase and inactivated derivatives Rso ...    75   5e-14
RSp0460 [L] COG2801 Transposase and inactivated derivatives Rso ...    74   6e-14
RSc1435 [L] COG2801 Transposase and inactivated derivatives Rso ...    74   6e-14
RSp0567 [L] COG2801 Transposase and inactivated derivatives Rso ...    73   2e-13

>RSc2331 [L] COG2801 Transposase and inactivated derivatives Rso Ralstonia
           solanacearum
          Length = 295

 Score = 74.7 bits (182), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 34/53 (64%), Positives = 41/53 (77%)

Query: 1   MKHDYIAFMNKPDVPTALTHLASAFEQYNERHPHKAVKHRSPRQFRRAAASAT 53
           MK DY+AFM KPD  TA  +LA AFE YNE+HPH A+K+RSPR+FRR   S+T
Sbjct: 241 MKRDYVAFMPKPDAATATRNLAIAFEHYNEQHPHSALKYRSPREFRRRTESST 293


>RSc1830 [L] COG2801 Transposase and inactivated derivatives Rso Ralstonia
           solanacearum
          Length = 282

 Score = 74.7 bits (182), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 34/53 (64%), Positives = 41/53 (77%)

Query: 1   MKHDYIAFMNKPDVPTALTHLASAFEQYNERHPHKAVKHRSPRQFRRAAASAT 53
           MK DY+AFM KPD  TA  +LA AFE YNE+HPH A+K+RSPR+FRR   S+T
Sbjct: 228 MKRDYVAFMPKPDAATATRNLAIAFEHYNEQHPHSALKYRSPREFRRRTESST 280


>RSp0460 [L] COG2801 Transposase and inactivated derivatives Rso Ralstonia
           solanacearum
          Length = 200

 Score = 74.3 bits (181), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 34/53 (64%), Positives = 41/53 (77%)

Query: 1   MKHDYIAFMNKPDVPTALTHLASAFEQYNERHPHKAVKHRSPRQFRRAAASAT 53
           MK DY+AFM KPD  TA  +LA AFE YNE+HPH A+K+RSPR+FRR   S+T
Sbjct: 146 MKRDYVAFMPKPDAATATRNLAIAFEHYNEQHPHSALKYRSPREFRRRTESST 198


>RSc1435 [L] COG2801 Transposase and inactivated derivatives Rso Ralstonia
           solanacearum
          Length = 200

 Score = 74.3 bits (181), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 34/53 (64%), Positives = 41/53 (77%)

Query: 1   MKHDYIAFMNKPDVPTALTHLASAFEQYNERHPHKAVKHRSPRQFRRAAASAT 53
           MK DY+AFM KPD  TA  +LA AFE YNE+HPH A+K+RSPR+FRR   S+T
Sbjct: 146 MKRDYVAFMPKPDAATATRNLAIAFEHYNEQHPHSALKYRSPREFRRRTESST 198


>RSp0567 [L] COG2801 Transposase and inactivated derivatives Rso Ralstonia
           solanacearum
          Length = 282

 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 33/52 (63%), Positives = 40/52 (76%)

Query: 1   MKHDYIAFMNKPDVPTALTHLASAFEQYNERHPHKAVKHRSPRQFRRAAASA 52
           MK DY+AFM KPD  TA  +LA AFE YNE+HPH A+K+RSPR+FRR   S+
Sbjct: 228 MKRDYVAFMPKPDAATAARNLAIAFEHYNEQHPHSALKYRSPREFRRRTESS 279