BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0039.0251.p         (230 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XF0878 [G] COG0726 Predicted xylanase/chitin deacetylase Xfa Xyl...    63   6e-10

>XF0878 [G] COG0726 Predicted xylanase/chitin deacetylase Xfa Xylella
           fastidiosa 9a5c
          Length = 257

 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 43/132 (32%), Positives = 63/132 (47%), Gaps = 15/132 (11%)

Query: 12  LLLTFDDGFASNLQVAQQILEPADIKALFFVASDFIDQSDTAAAHRFIHERLKVGSSPEA 71
           +++T DDG+  NLQ A  +L+     A  +V S  + + +T  A     ERL V   P  
Sbjct: 82  MVVTLDDGYLDNLQAALPVLQAHGFSATCYVVSGSLARFNTWDA-----ERLNV-CKPLM 135

Query: 72  LPAHWVNMSWNDLLKLRELGHTVGAHTASHERLTSRLPLNVMQHEIIAAADRMQEKLGAP 131
            PA      W+D       G  VGAHT SH  L+       +  EI    D +++ +GAP
Sbjct: 136 SPAQ--VRQWHDA------GMEVGAHTRSHPHLSGCTAAQ-LHEEIAGCRDDLEQCIGAP 186

Query: 132 VRHFAFPFGDFS 143
           V  F +P+GD +
Sbjct: 187 VTQFCYPYGDVT 198