BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0039.0134.p (325 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA0496 [E] COG1984 Allophanate hydrolase subunit 2 Pae Pseudomon... 477 e-134 BH1818 [E] COG1984 Allophanate hydrolase subunit 2 Bha Bacillus ... 209 6e-54 FN0436 [E] COG1984 Allophanate hydrolase subunit 2 Fnu Fusobacte... 203 4e-52 ybgK [E] COG1984 Allophanate hydrolase subunit 2 Eco Escherichia... 190 4e-48 ECs0737 [E] COG1984 Allophanate hydrolase subunit 2 Ecs Escheric... 190 5e-48 >PA0496 [E] COG1984 Allophanate hydrolase subunit 2 Pae Pseudomonas aeruginosa Length = 325 Score = 477 bits (1228), Expect = e-134, Method: Compositional matrix adjust. Identities = 236/323 (73%), Positives = 272/323 (84%) Query: 1 MTIKVKQPGLATSVQDGGREGYYHLGIPPSGALDQYALRSANLLVGNHASTSALECSLLG 60 M+IKV +PGLATSVQD GREG+YHLGIPPSGALDQYALR+ANLLVGN + + LEC+LLG Sbjct: 1 MSIKVLKPGLATSVQDAGREGHYHLGIPPSGALDQYALRAANLLVGNAPTAAVLECALLG 60 Query: 61 PQLEFRSDALVAVTGARMQPRVDGSERPLDTAFMVRSGQVLSFDYPKAGARSYLAIAGGI 120 PQLEF+ DALVAV GARM PR++G+E PLDT+F VR+GQVL FD+ +AGAR YLAI GGI Sbjct: 61 PQLEFQRDALVAVCGARMTPRLEGAEMPLDTSFRVRAGQVLGFDFIRAGARGYLAIDGGI 120 Query: 121 DVPVVLESRSTYALGALGGWQGRKLAKDDELPLGRASPKAIEGRTLPLSLVPVYDREATL 180 VP VL SRSTY LGA+GG QGR+LA+ D LPLG ASP A+EG LP SL E +L Sbjct: 121 AVPEVLGSRSTYGLGAIGGLQGRRLAEGDLLPLGPASPSAVEGLALPRSLQVEVGGEVSL 180 Query: 181 RVVPGLYIHRLTDEAVERFFADTWTVGSEADRIGYRFKGGQAMQFRPREQPFGAGSDPSN 240 RVVPGLY+HRLT +AVERFFA+TWTVGSEADR GYRFKGG A++F PREQPFGAGSDPSN Sbjct: 181 RVVPGLYVHRLTPDAVERFFAETWTVGSEADRTGYRFKGGTALRFEPREQPFGAGSDPSN 240 Query: 241 IVDACYPIGSIQIPGGLEPIVLLRDAVSGGGYATIGTVISADLDLIGQLQPNHKAQFVRV 300 IVDACYPIGSIQ+PGGLEPIVL RDAVSGGGYAT+GTVIS DL+ + Q+QPN K +FV V Sbjct: 241 IVDACYPIGSIQVPGGLEPIVLHRDAVSGGGYATLGTVISPDLNRLAQMQPNQKGRFVAV 300 Query: 301 TLEQALEARRQYQQRIQRLASFL 323 +LE+ LEARR+Y ++QRL F Sbjct: 301 SLEEGLEARRRYNWQVQRLQHFF 323 >BH1818 [E] COG1984 Allophanate hydrolase subunit 2 Bha Bacillus halodurans Length = 331 Score = 209 bits (532), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 123/330 (37%), Positives = 181/330 (54%), Gaps = 32/330 (9%) Query: 3 IKVKQPGLATSVQDGGREGYYHLGIPPSGALDQYALRSANLLVGNHASTSALECSLLGPQ 62 + + +PGL T++QD GR GY G+ SG +D+YA R ANLLVGN + LE + +GP Sbjct: 1 MTIFRPGLLTTIQDLGRTGYLKYGVIVSGPMDEYAHRMANLLVGNDEKAALLEMTFIGPT 60 Query: 63 LEFRSDALVAVTGARMQPRVDGSERPLDTAFMVRSGQVLSFDYPKAGARSYLAIAGGIDV 122 ++F SD L+A+TG + P +DG P+ V+ G VLSF K G RSYLAI GGIDV Sbjct: 61 IQFTSDQLIAMTGGDLSPTIDGHSVPMYRPVFVKKGAVLSFGRCKTGCRSYLAIGGGIDV 120 Query: 123 PVVLESRSTYALGALGGWQGRKLAKDDELPLGRASPKAIEG--RTLPLSLVPVYDR---- 176 P V+ SRSTY +GG+QGR L + DEL G A P+ E +T +V + Sbjct: 121 PKVMNSRSTYLRAKIGGFQGRALVEGDELICG-APPEQTERLVKTCQKGIVHSFATTKWS 179 Query: 177 -----------EATLRVVPGLYIHRLTDEAVERFFADTWTVGSEADRIGYRFKGGQAMQF 225 E +RV G + + ++ + +FF++T+ V S++DR+GYR KG + Sbjct: 180 VVSSQRSRDGAEKVVRVTVGSHYEQFSEASQHKFFSETFQVTSKSDRMGYRLKGPTLERL 239 Query: 226 RPREQPFGAGSDPSNIVDACYPIGSIQIPGGLEPIVLLRDAVSGGGYATIGTVISADLDL 285 +E ++ +G+IQ+P PI+L+ D + GGY I VI+ DL + Sbjct: 240 EEQE-----------LISEPISVGTIQVPADGNPIILMADRQTTGGYPRIAHVIAVDLPI 288 Query: 286 IGQLQPNHKAQFVRVTLEQALEARRQYQQR 315 I Q +P +F + +L+ EA R Y +R Sbjct: 289 IAQAKPGAAIRFQQASLK---EAERLYIRR 315 >FN0436 [E] COG1984 Allophanate hydrolase subunit 2 Fnu Fusobacterium nucleatum Length = 336 Score = 203 bits (517), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 110/313 (35%), Positives = 171/313 (54%), Gaps = 15/313 (4%) Query: 2 TIKVKQPGLATSVQDGGREGYYHLGIPPSGALDQYALRSANLLVGNHASTSALECSLLGP 61 IKV +PGL T+VQD GR GY GIP SG +D++A AN LV + + + LE LGP Sbjct: 3 NIKVHKPGLCTTVQDIGRIGYQQFGIPVSGVMDEFAFTVANYLVESDKNNTVLEIPFLGP 62 Query: 62 QLEFRSDALVAVTGARMQPRVDGSERPLDTAFMVRSGQVLSFDYPKAGARSYLAIAGGID 121 LEF D +A+TGA +QP+++ E + + ++ G LSF K G RSYLA + ID Sbjct: 63 TLEFDFDVTIAITGADIQPKINNQEVKMWQSINIKKGDTLSFGGLKTGIRSYLAFSAEID 122 Query: 122 VPVVLESRSTYALGALGGWQGRKLAKDDELPLGRASPKAIEGRTLPLSLVPVYDREATLR 181 VP+++ S+ST LGG+ GR+L D + + + L +P Y +R Sbjct: 123 VPIIMGSKSTLLKSKLGGFDGRQLKIGDIINFKNVKVLS-KKNILDKKYIPEYKHNQNIR 181 Query: 182 VVPGLYIHRLTDEAVERFFADTWTVGSEADRIGYRFKGGQAMQFRPREQPFGAGSDPSNI 241 +V G + + +++ + + V +ADR+G R G+ ++ + D ++I Sbjct: 182 IVLGPQDNYFDENSIKTLLENKYQVTKDADRMGMRLL-GEVIKHK----------DKADI 230 Query: 242 VDACYPIGSIQIPGGLEPIVLLRDAVSGGGYATIGTVISADLDLIGQLQPNHKAQFVRVT 301 + GSIQ+PG +PI+LL D + GGY I TVI ADL + Q+ PN +F + Sbjct: 231 ISDAAVFGSIQVPGNGQPIILLADRQTTGGYTKIATVIKADLPKLAQMVPNDTIEFSLIN 290 Query: 302 LEQALEARRQYQQ 314 +E EA+++Y++ Sbjct: 291 IE---EAQKEYKE 300 >ybgK [E] COG1984 Allophanate hydrolase subunit 2 Eco Escherichia coli K12 Length = 310 Score = 190 bits (482), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 117/323 (36%), Positives = 177/323 (54%), Gaps = 16/323 (4%) Query: 3 IKVKQPGLATSVQDGGREGYYHLGIPPSGALDQYALRSANLLVGNHASTSALECSLLGPQ 62 +K+ + G+ T+VQDGGR G+ GI GALD ALR ANLLVGN A+ ALE +L Sbjct: 2 LKIIRAGMYTTVQDGGRHGFRQSGISHCGALDMPALRIANLLVGNDANAPALEITLGQLT 61 Query: 63 LEFRSDALVAVTGARMQPRVDGSERPLDTAFMVRSGQVLSFDYPKAGARSYLAIAGGIDV 122 +EF +D A+TGA + R+D + +++GQ L+ P+ G RSYLA+AGGIDV Sbjct: 62 VEFETDGWFALTGAGCEARLDDNAVWTGWRLPMKAGQRLTLKRPQHGMRSYLAVAGGIDV 121 Query: 123 PVVLESRSTYALGALGGWQGRKLAKDDELPLGRASPKAIEGRTLPLSLVPVYDREATLRV 182 P V+ S ST +GG +GR L D LP+G++ ++E + + L +R Sbjct: 122 PPVMGSCSTDLKVGIGGLEGRLLKDGDRLPIGKSKRDSMEAQGVKQLLW-----GNRIRA 176 Query: 183 VPGLYIHRLTDEAVERFFADTWTVGSEADRIGYRFKGGQAMQFRPREQPFGAGSDPSNIV 242 +PG H + + F+ W + S+++R+GYR +G Q +D + Sbjct: 177 LPGPEYHEFDRASQDAFWRSPWQLSSQSNRMGYRLQG----------QILKRTTDRELLS 226 Query: 243 DACYPIGSIQIPGGLEPIVLLRDAVSGGGYATIGTVISADLDLIGQLQPNHKAQFVRVTL 302 P G +Q+P +PIVL+ DA + GGY I +I AD+ + Q+ FV+ +L Sbjct: 227 HGLLP-GVVQVPHNGQPIVLMNDAQTTGGYPRIACIIEADMYHLAQIPLGQPIHFVQCSL 285 Query: 303 EQALEARRQYQQRIQRLASFLDN 325 E+AL+AR+ Q+ ++LA L N Sbjct: 286 EEALKARQDQQRYFEQLAWRLHN 308 >ECs0737 [E] COG1984 Allophanate hydrolase subunit 2 Ecs Escherichia coli O157:H7 Length = 310 Score = 190 bits (482), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 118/323 (36%), Positives = 176/323 (54%), Gaps = 16/323 (4%) Query: 3 IKVKQPGLATSVQDGGREGYYHLGIPPSGALDQYALRSANLLVGNHASTSALECSLLGPQ 62 +K+ + G+ T+VQDGGR G+ GI GALD ALR ANLLVGN A+ ALE +L Sbjct: 2 LKIIRAGMYTTVQDGGRHGFRQSGISHCGALDMPALRIANLLVGNDANAPALEITLGQLT 61 Query: 63 LEFRSDALVAVTGARMQPRVDGSERPLDTAFMVRSGQVLSFDYPKAGARSYLAIAGGIDV 122 +EF +D A+TGA + R+D + +++GQ L+ P+ G RSYLA+AGGIDV Sbjct: 62 VEFETDGWFALTGAGCEARLDDNAVWTGWRLPMKAGQRLTLKRPQHGMRSYLAVAGGIDV 121 Query: 123 PVVLESRSTYALGALGGWQGRKLAKDDELPLGRASPKAIEGRTLPLSLVPVYDREATLRV 182 P V+ S ST +GG +GR L D LP+G+A +E + + L +R Sbjct: 122 PPVMGSCSTDLKVGIGGLEGRLLKDGDRLPIGKAKRDFMEAQGVKQLLW-----GNRIRA 176 Query: 183 VPGLYIHRLTDEAVERFFADTWTVGSEADRIGYRFKGGQAMQFRPREQPFGAGSDPSNIV 242 +PG H + + F+ W + S+++R+GYR +G Q +D + Sbjct: 177 LPGPEYHEFDRASQDAFWRSPWQLSSQSNRMGYRLQG----------QILKRTTDRELLS 226 Query: 243 DACYPIGSIQIPGGLEPIVLLRDAVSGGGYATIGTVISADLDLIGQLQPNHKAQFVRVTL 302 P G +Q+P +PIVL+ DA + GGY I +I AD+ + Q+ FV+ +L Sbjct: 227 HGLLP-GVVQVPHNGQPIVLMNDAQTTGGYPRIACIIEADMYHLAQIPLGQPIHFVQCSL 285 Query: 303 EQALEARRQYQQRIQRLASFLDN 325 E+AL+AR+ Q+ ++LA L N Sbjct: 286 EEALKARQDQQRYFEQLAWRLHN 308