BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0039.0130.p (243 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA0492 [R] COG1540 Uncharacterized proteins, homologs of lactam ... 400 e-111 PAB2445 [R] COG1540 Uncharacterized proteins, homologs of lactam... 202 5e-52 AGl1871 Non COG 202 6e-52 PH0986 [R] COG1540 Uncharacterized proteins, homologs of lactam ... 198 1e-50 SA1433 [R] COG1540 Uncharacterized proteins, homologs of lactam ... 188 9e-48 >PA0492 [R] COG1540 Uncharacterized proteins, homologs of lactam utilization protein B Pae Pseudomonas aeruginosa Length = 252 Score = 400 bits (1028), Expect = e-111, Method: Compositional matrix adjust. Identities = 195/242 (80%), Positives = 213/242 (88%) Query: 1 MGEGFGPWTIGDGVDAAILPLISSANIATGFHAGDPNTMRRTVELARQHGVAIGAHPGFR 60 MGEGFGPWTIGDGVDAAI+PLISSANIATGFHAGDP++MRRTVE+A +HGVAIGAHPGFR Sbjct: 10 MGEGFGPWTIGDGVDAAIMPLISSANIATGFHAGDPSSMRRTVEMAAEHGVAIGAHPGFR 69 Query: 61 DLVGFGRRHLNAPAIELVNDMLYQLGALREFARLNGLPLQHIKPHGALYMHLARDEEAAR 120 DLVGFGRRH+ APAIELVNDMLYQLGALREFARL GL LQH+KPHGALYMHLARDE AAR Sbjct: 70 DLVGFGRRHIAAPAIELVNDMLYQLGALREFARLQGLSLQHVKPHGALYMHLARDEVAAR 129 Query: 121 VFVQTLRQLDPNLLLFCMHGSAVWRVAQELQQAVVCEFYADRDYDNSGSIVFTRRVGALD 180 +FV+TL++L+P LLL+CM GSA WR+ +EL Q +V EFYADRDYD SGSIVFTRRV ALD Sbjct: 130 LFVETLQRLEPELLLYCMPGSATWRIGRELGQPLVREFYADRDYDRSGSIVFTRRVAALD 189 Query: 181 AAQVAAKVLRACCEGVVRTVEGRDIPIAFDSVCIHSDTPGALALVQATRKSLEAADIAIA 240 QVA KVLRAC EG VRTVEG D+ IAFDSVCIHSDTPGAL LV +TR LE A I I Sbjct: 190 PQQVADKVLRACREGKVRTVEGEDLDIAFDSVCIHSDTPGALELVASTRARLEGAGIRIK 249 Query: 241 AP 242 AP Sbjct: 250 AP 251 >PAB2445 [R] COG1540 Uncharacterized proteins, homologs of lactam utilization protein B Pab Pyrococcus abyssi Length = 255 Score = 202 bits (514), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 99/241 (41%), Positives = 152/241 (63%), Gaps = 4/241 (1%) Query: 1 MGEGFGPWTIGDGVDAAILPLISSANIATGFHAGDPNTMRRTVELARQHGVAIGAHPGFR 60 +GE FG + +G +D ++ I+SANIA G+HAGDP MRRTV+LA+++ V +GAHPG+ Sbjct: 9 LGESFGRYKLG--LDEEVMRYITSANIACGWHAGDPIVMRRTVKLAKENNVQVGAHPGYP 66 Query: 61 DLVGFGRRHLNAPAIELVNDMLYQLGALREFARLNGLPLQHIKPHGALYMHLARDEEAAR 120 DL+GFGRR++ E N +LYQ+GAL FA+ G+ LQH+KPHGALY + ++EE AR Sbjct: 67 DLMGFGRRYMKLTPEEARNYILYQIGALYAFAKAEGVELQHVKPHGALYNAMVKEEELAR 126 Query: 121 VFVQTLRQLDPNLLLFCMHGSAVWRVAQELQQAVVCEFYADRDYDNSGSIVFTRRVGAL- 179 ++ + D NL+L + S V +A+E+ V E +ADR Y+ G++V + GA+ Sbjct: 127 AVIEGILDFDKNLILVTLSNSRVAEIAEEMGLKVAHEVFADRAYNPDGTLVPRGKPGAVI 186 Query: 180 -DAAQVAAKVLRACCEGVVRTVEGRDIPIAFDSVCIHSDTPGALALVQATRKSLEAADIA 238 D ++A +V+ +G VR + G + + D++C+H D P AL + RK LE + Sbjct: 187 EDKEEIAERVISMVKDGGVRAINGEWVELRVDTICVHGDNPKALEITSHIRKILEEEGVK 246 Query: 239 I 239 + Sbjct: 247 V 247 >AGl1871 Non COG Length = 255 Score = 202 bits (514), Expect = 6e-52, Method: Compositional matrix adjust. Identities = 101/241 (41%), Positives = 156/241 (64%), Gaps = 4/241 (1%) Query: 1 MGEGFGPWTIGDGVDAAILPLISSANIATGFHAGDPNTMRRTVELARQHGVAIGAHPGFR 60 +GE +G W +GD D A+L ++SSANIA GFHAGDP + RTV+ A + GV +GAH + Sbjct: 10 LGESYGAWRMGD--DEAMLAIVSSANIACGFHAGDPAGIYRTVKAAAEKGVVVGAHVSYP 67 Query: 61 DLVGFGRRHLNAPAIELVNDMLYQLGALREFARLNGLPLQHIKPHGALYMHLARDEEAAR 120 D VGFGRR L+A + EL+ D++YQ+GAL+ A G ++++KPHGALY +A D + + Sbjct: 68 DRVGFGRRDLDATSEELIADVIYQIGALKGVAAAAGTTVRYVKPHGALYNRIANDAKQGQ 127 Query: 121 VFVQTLRQLDPNLLLFCMHGSAVWRVAQELQQAVVCEFYADRDYDNSGSIVFTRRVGAL- 179 + ++ +DP+L+L + + + +A++ AVV E +ADR Y G +V R GA+ Sbjct: 128 AVIDGIKAIDPSLVLMGLANAPILDLARKAGLAVVAEAFADRAYTPEGQLVSRREAGAVL 187 Query: 180 -DAAQVAAKVLRACCEGVVRTVEGRDIPIAFDSVCIHSDTPGALALVQATRKSLEAADIA 238 DAA++A ++++ EG + ++G I I S+C+H D+PGA+A+ Q R+ EA IA Sbjct: 188 HDAAKIAERMVQLAREGTLEAIDGSIIKIEAQSICVHGDSPGAVAIAQEIRRRFEADGIA 247 Query: 239 I 239 I Sbjct: 248 I 248 >PH0986 [R] COG1540 Uncharacterized proteins, homologs of lactam utilization protein B Pho Pyrococcus horikoshii Length = 255 Score = 198 bits (503), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 96/241 (39%), Positives = 151/241 (62%), Gaps = 4/241 (1%) Query: 1 MGEGFGPWTIGDGVDAAILPLISSANIATGFHAGDPNTMRRTVELARQHGVAIGAHPGFR 60 +GE FG + +G +D ++ I+SAN+A G+HAGDP MR+TV LA+++ V +GAHPG+ Sbjct: 9 LGESFGRYKLG--LDEEVMKYITSANVACGWHAGDPLVMRKTVRLAKENDVQVGAHPGYP 66 Query: 61 DLVGFGRRHLNAPAIELVNDMLYQLGALREFARLNGLPLQHIKPHGALYMHLARDEEAAR 120 DL+GFGRR++ E N +LYQ+GAL FA+ GL LQH+KPHGALY + ++E+ AR Sbjct: 67 DLMGFGRRYMKLTPEEARNYILYQVGALYAFAKAEGLELQHVKPHGALYNAMVKEEDLAR 126 Query: 121 VFVQTLRQLDPNLLLFCMHGSAVWRVAQELQQAVVCEFYADRDYDNSGSIVFTRRVGAL- 179 ++ + D +L+L + S V +A+E+ V E +ADR Y+ G++V R GA+ Sbjct: 127 AVIEGILDFDKDLILVTLSNSRVADIAEEMGLKVAHEVFADRAYNPDGTLVPRGRPGAVI 186 Query: 180 -DAAQVAAKVLRACCEGVVRTVEGRDIPIAFDSVCIHSDTPGALALVQATRKSLEAADIA 238 D ++A +V+ +G +R + G + + D++C+H D P A+ + RK LE + Sbjct: 187 EDKEEIAERVISMVKDGGIRAINGEWVDLKVDTICVHGDNPKAVEITSYIRKVLEEEGVK 246 Query: 239 I 239 I Sbjct: 247 I 247 >SA1433 [R] COG1540 Uncharacterized proteins, homologs of lactam utilization protein B Sau Staphylococcus aureus N315 Length = 250 Score = 188 bits (478), Expect = 9e-48, Method: Compositional matrix adjust. Identities = 97/243 (39%), Positives = 143/243 (58%), Gaps = 4/243 (1%) Query: 1 MGEGFGPWTIGDGVDAAILPLISSANIATGFHAGDPNTMRRTVELARQHGVAIGAHPGFR 60 +GE FG ++ G D I+PLI+SAN+A GFHAGD N M TV+LA+ H VA+GAHPG Sbjct: 9 LGEAFGNYSFGG--DHQIIPLITSANVACGFHAGDENVMNETVKLAKAHNVAVGAHPGLP 66 Query: 61 DLVGFGRRHLNAPAIELVNDMLYQLGALREFARLNGLPLQHIKPHGALYMHLARDEEAAR 120 DL GFGRR+++ E+ N M+YQLGAL+ F R++ L + H+KPHGALY A+D E A Sbjct: 67 DLKGFGRRNIDISNDEIYNLMIYQLGALQGFCRIHQLKINHVKPHGALYQMGAKDREIAN 126 Query: 121 VFVQTLRQLDPNLLLFCMHGSAVWRVAQELQQAVVCEFYADRDYDNSGSIVFTRRVGAL- 179 V Q + DP+L+L + S + A+ + E +ADR Y++ G +V + A+ Sbjct: 127 VIAQAVYDFDPSLVLVGLANSYLISEAKNVGLITASEVFADRRYEDDGQLVSRKESDAVI 186 Query: 180 -DAAQVAAKVLRACCEGVVRTVEGRDIPIAFDSVCIHSDTPGALALVQATRKSLEAADIA 238 D + +VL+ E V + +++ + D++C+H D AL V R+ L I Sbjct: 187 TDTDEALKQVLKMVKENKVISKNNKEVTLQADTICVHGDGEHALLFVSKIREILMKEGID 246 Query: 239 IAA 241 I + Sbjct: 247 IQS 249