BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0039.0125.p (428 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1080 [GEPR] COG0477 Permeases of the major facilitator superf... 719 0.0 RSp0834 [GEPR] COG0477 Permeases of the major facilitator superf... 459 e-129 YPO0577 [GEPR] COG0477 Permeases of the major facilitator superf... 441 e-123 exuT [GEPR] COG0477 Permeases of the major facilitator superfami... 436 e-122 ZexuT [GEPR] COG0477 Permeases of the major facilitator superfam... 436 e-122 >RSc1080 [GEPR] COG0477 Permeases of the major facilitator superfamily Rso Ralstonia solanacearum Length = 432 Score = 719 bits (1857), Expect = 0.0, Method: Compositional matrix adjust. Identities = 360/428 (84%), Positives = 390/428 (91%) Query: 1 LKTIKGLRWWIIVLVCLGTITNYLARNSLGVLAPTLKDELGMSTQQYSYVVAAFQVGYTI 60 +KTIKGLRWWII LVCLGTITNYLARNSLGVLAP LK ELGMSTQQYSYVV AFQ+GYTI Sbjct: 1 MKTIKGLRWWIIALVCLGTITNYLARNSLGVLAPQLKTELGMSTQQYSYVVGAFQIGYTI 60 Query: 61 MQPVCGFIVDLIGLRIGFALFGVLWSVAGVLHAGATGWLSLAGFRALMGLTEAAAIPSGM 120 MQPVCGFIVDLIGLRIGFALF VLWS+AG LHAGA+GWLSLA FR LMGLTEAAAIPSGM Sbjct: 61 MQPVCGFIVDLIGLRIGFALFAVLWSIAGCLHAGASGWLSLASFRGLMGLTEAAAIPSGM 120 Query: 121 KAVAEWFPDKEKSVAVGWFNSGTSLGAMLAPPLVIFLQIRYGWQSAFVVTGILGFVWAAL 180 KAVAEWFPDKEKSVAVG+FN+GTSLGA+LAPPLV+FL +RYGWQSAFVVTG LGFVWAAL Sbjct: 121 KAVAEWFPDKEKSVAVGYFNAGTSLGALLAPPLVVFLSLRYGWQSAFVVTGALGFVWAAL 180 Query: 181 WFAFYRSPRDHAALSDSERETIISGQLRPVSAVRGKRPVKDVVRSRRFWAIALARFFAEP 240 W+ FYRSPR+HA LS +E + II GQ+R A RGKRPV++VV SRRFWAIAL RFFAEP Sbjct: 181 WYGFYRSPREHAKLSATEHDRIIGGQIRSAGAARGKRPVREVVTSRRFWAIALPRFFAEP 240 Query: 241 AWQTFSFWIPLYFVNERHLDLKSIAMFAWLPFLAADLGGLAGGYLSPFLINRFRIPLVWS 300 AWQTFSFWIPLY + RH+DLK IA+FAWLPFLAADLGGL GGYLSPF + FR+PL+WS Sbjct: 241 AWQTFSFWIPLYLSSARHMDLKEIALFAWLPFLAADLGGLLGGYLSPFFMKFFRVPLIWS 300 Query: 301 RVCGVVLGAVMMIGPACVGLVASPYVAIALFCVGGFAHQMISGLVNTLSADVFDPEEVGT 360 RVCGVVLGA +MIGPAC+GLVASPY AIALFCVGGFAHQMIS LVNTLSADVFDPEEVGT Sbjct: 301 RVCGVVLGAFLMIGPACIGLVASPYQAIALFCVGGFAHQMISTLVNTLSADVFDPEEVGT 360 Query: 361 ASGFAGMSAWIGGLGFSLLVGALADTVGYGPLFGMLGAFDLIGAVLLIILIRGQSTEERA 420 ASGFAGM+AWIGGLGFSL+VGALADTVGYGPLFG+LGAFDLIGA LLI+LIRGQS EERA Sbjct: 361 ASGFAGMAAWIGGLGFSLMVGALADTVGYGPLFGLLGAFDLIGATLLILLIRGQSQEERA 420 Query: 421 ARSLQSSV 428 AR +Q + Sbjct: 421 ARQMQHHL 428 >RSp0834 [GEPR] COG0477 Permeases of the major facilitator superfamily Rso Ralstonia solanacearum Length = 435 Score = 459 bits (1181), Expect = e-129, Method: Compositional matrix adjust. Identities = 229/413 (55%), Positives = 295/413 (71%), Gaps = 1/413 (0%) Query: 1 LKTIKGLRWWIIVLVCLGTITNYLARNSLGVLAPTLKDELGMSTQQYSYVVAAFQVGYTI 60 + TIKGLRWW+I LV G I NYLARN+L AP + LG++TQQY Y+VAAFQ Y + Sbjct: 1 MNTIKGLRWWMIGLVLTGLIMNYLARNALAAAAPEVNKVLGITTQQYGYIVAAFQAAYMV 60 Query: 61 MQPVCGFIVDLIGLRIGFALFGVLWSVAGVLHAGATGWLSLAGFRALMGLTEAAAIPSGM 120 MQPV G+++D++G ++GFALF WSV +LH+ A W+SLA FRA++G+TEAA PS + Sbjct: 61 MQPVAGYVLDVLGTKLGFALFAGAWSVVCILHSTAGNWVSLAVFRAMLGVTEAAGFPSAL 120 Query: 121 KAVAEWFPDKEKSVAVGWFNSGTSLGAMLAPPLVIFLQIRYGWQSAFVVTGILGFVWAAL 180 +A +EWFP KE+S+A GWFN G+S+GA++APPLV++ + W+ AF V G+LG VW+AL Sbjct: 121 RATSEWFPAKERSIATGWFNIGSSVGALVAPPLVVWCILHGNWRFAFAVIGVLGLVWSAL 180 Query: 181 WFAFYRSPRDHAALSDSERETIISGQLRPVSAVRGKRPV-KDVVRSRRFWAIALARFFAE 239 WF YR P H LS E I +GQ P +P ++++ RRFW IA+ RF E Sbjct: 181 WFMLYRVPARHPRLSAEEHAYIRAGQETPAPGADAVKPSWREIMSGRRFWGIAIPRFLTE 240 Query: 240 PAWQTFSFWIPLYFVNERHLDLKSIAMFAWLPFLAADLGGLAGGYLSPFLINRFRIPLVW 299 PAWQTF+FWIPLY ERH++LK IAMFAWLPFLAAD+G + GGYL+P+ RF L+ Sbjct: 241 PAWQTFNFWIPLYMATERHMNLKEIAMFAWLPFLAADVGCVLGGYLAPWYQKRFSTSLIT 300 Query: 300 SRVCGVVLGAVMMIGPACVGLVASPYVAIALFCVGGFAHQMISGLVNTLSADVFDPEEVG 359 SR +V GAV MIGPAC+GL SPY AIALFCVGGFAHQ +SG + TL++DVF EVG Sbjct: 301 SRKMVMVTGAVCMIGPACIGLATSPYTAIALFCVGGFAHQTLSGALYTLTSDVFGKHEVG 360 Query: 360 TASGFAGMSAWIGGLGFSLLVGALADTVGYGPLFGMLGAFDLIGAVLLIILIR 412 TA G AGMS ++GG FSL VG LA T+GY PLF L FD+ A+++ ++R Sbjct: 361 TAVGLAGMSGFLGGTLFSLAVGTLASTIGYNPLFAALALFDIAAAIVMWNVLR 413 >YPO0577 [GEPR] COG0477 Permeases of the major facilitator superfamily Ype Yersinia pestis Length = 434 Score = 441 bits (1134), Expect = e-123, Method: Compositional matrix adjust. Identities = 206/426 (48%), Positives = 296/426 (69%), Gaps = 1/426 (0%) Query: 1 LKTIKGLRWWIIVLVCLGTITNYLARNSLGVLAPTLKDELGMSTQQYSYVVAAFQVGYTI 60 ++ IKGLRW++I LV +GTI YL RN++ V APTL+++L ++TQQYSY++AA+ YT+ Sbjct: 2 MRKIKGLRWYMIALVTVGTILGYLTRNAIAVAAPTLQEQLHITTQQYSYIIAAYSAAYTL 61 Query: 61 MQPVCGFIVDLIGLRIGFALFGVLWSVAGVLHAGATGWLSLAGFRALMGLTEAAAIPSGM 120 MQPV G+++D++G ++G+A+F V+W++ + A A+ W LA R +G+ EAA IP+G+ Sbjct: 62 MQPVAGYVLDVMGTKVGYAMFAVMWAIFCMSTALASSWGGLAIARGAVGMAEAAMIPAGL 121 Query: 121 KAVAEWFPDKEKSVAVGWFNSGTSLGAMLAPPLVIFLQIRYGWQSAFVVTGILGFVWAAL 180 KA +EWFP KE+S+AVG+FN G+S+G M+APPLV++ + + WQ AF++TG+L +WA Sbjct: 122 KASSEWFPAKERSIAVGYFNVGSSIGGMIAPPLVVWAIVMHSWQMAFIITGVLSLIWAIA 181 Query: 181 WFAFYRSPRDHAALSDSERETIISGQLRPVSAVRGKR-PVKDVVRSRRFWAIALARFFAE 239 W Y+ P+D LSD ERE I+SGQ S K+ ++R+R+FW IA+ RF AE Sbjct: 182 WLILYKHPKDQKRLSDEEREYILSGQEAQHSTANAKKMSAMQIIRNRQFWGIAIPRFLAE 241 Query: 240 PAWQTFSFWIPLYFVNERHLDLKSIAMFAWLPFLAADLGGLAGGYLSPFLINRFRIPLVW 299 PAW TF+ WIPL+ +LK IAMFAW+P L AD+G + GGYL P F++ L+ Sbjct: 242 PAWGTFNAWIPLFMFKAYGFNLKEIAMFAWMPMLFADVGCILGGYLPPLFQKYFKVNLIV 301 Query: 300 SRVCGVVLGAVMMIGPACVGLVASPYVAIALFCVGGFAHQMISGLVNTLSADVFDPEEVG 359 SR V +G V+MIGP +GL SPY AIAL C+GGFAHQ +SG + TLS+DVF EV Sbjct: 302 SRKLVVTMGGVLMIGPGTIGLFTSPYAAIALLCIGGFAHQALSGALITLSSDVFGRNEVA 361 Query: 360 TASGFAGMSAWIGGLGFSLLVGALADTVGYGPLFGMLGAFDLIGAVLLIILIRGQSTEER 419 TA+G GM+AW F+L+VGALADT+G+ PLF L FDL+ V++ +++ ++ +E Sbjct: 362 TANGLTGMAAWTASTLFALVVGALADTMGFSPLFAALAVFDLLAVVVIWTVLQDRTADEP 421 Query: 420 AARSLQ 425 +Q Sbjct: 422 TNDPVQ 427 >exuT [GEPR] COG0477 Permeases of the major facilitator superfamily Eco Escherichia coli K12 Length = 472 Score = 436 bits (1121), Expect = e-122, Method: Compositional matrix adjust. Identities = 218/425 (51%), Positives = 297/425 (69%), Gaps = 3/425 (0%) Query: 1 LKTIKGLRWWIIVLVCLGTITNYLARNSLGVLAPTLKDELGMSTQQYSYVVAAFQVGYTI 60 ++ IKGLRW++I LV LGT+ YL RN++ APTL +EL +STQQYSY++AA+ YT+ Sbjct: 41 MRKIKGLRWYMIALVTLGTVLGYLTRNTVAAAAPTLMEELNISTQQYSYIIAAYSAAYTV 100 Query: 61 MQPVCGFIVDLIGLRIGFALFGVLWSVAGVLHAGATGWLSLAGFRALMGLTEAAAIPSGM 120 MQPV G+++D++G +IG+A+F VLW+V A A W LA R +G EAA IP+G+ Sbjct: 101 MQPVAGYVLDVLGTKIGYAMFAVLWAVFCGATALAGSWGGLAVARGAVGAAEAAMIPAGL 160 Query: 121 KAVAEWFPDKEKSVAVGWFNSGTSLGAMLAPPLVIFLQIRYGWQSAFVVTGILGFVWAAL 180 KA +EWFP KE+S+AVG+FN G+S+GAM+APPLV++ + + WQ AF+++G L F+WA Sbjct: 161 KASSEWFPAKERSIAVGYFNVGSSIGAMIAPPLVVWAIVMHSWQMAFIISGALSFIWAMA 220 Query: 181 WFAFYRSPRDHAALSDSERETIISGQ--LRPVSAVRGKRPVKDVVRSRRFWAIALARFFA 238 W FY+ PRD L+D ER+ II+GQ VS + K V ++R+R+FW IAL RF A Sbjct: 221 WLIFYKHPRDQKHLTDEERDYIINGQEAQHQVSTAK-KMSVGQILRNRQFWGIALPRFLA 279 Query: 239 EPAWQTFSFWIPLYFVNERHLDLKSIAMFAWLPFLAADLGGLAGGYLSPFLINRFRIPLV 298 EPAW TF+ WIPL+ +LK IAMFAW+P L ADLG + GGYL P F + L+ Sbjct: 280 EPAWGTFNAWIPLFMFKVYGFNLKEIAMFAWMPMLFADLGCILGGYLPPLFQRWFGVNLI 339 Query: 299 WSRVCGVVLGAVMMIGPACVGLVASPYVAIALFCVGGFAHQMISGLVNTLSADVFDPEEV 358 SR V LGAV+MIGP +GL +PYVAI L C+GGFAHQ +SG + TLS+DVF EV Sbjct: 340 VSRKMVVTLGAVLMIGPGMIGLFTNPYVAIMLLCIGGFAHQALSGALITLSSDVFGRNEV 399 Query: 359 GTASGFAGMSAWIGGLGFSLLVGALADTVGYGPLFGMLGAFDLIGAVLLIILIRGQSTEE 418 TA+G GMSAW+ F+L+VGALADT+G+ PLF +L FDL+GA+++ +++ + E Sbjct: 400 ATANGLTGMSAWLASTLFALVVGALADTIGFSPLFAVLAVFDLLGALVIWTVLQNKPAIE 459 Query: 419 RAARS 423 A + Sbjct: 460 VAQET 464 >ZexuT [GEPR] COG0477 Permeases of the major facilitator superfamily EcZ Escherichia coli O157:H7 EDL933 Length = 472 Score = 436 bits (1121), Expect = e-122, Method: Compositional matrix adjust. Identities = 218/425 (51%), Positives = 297/425 (69%), Gaps = 3/425 (0%) Query: 1 LKTIKGLRWWIIVLVCLGTITNYLARNSLGVLAPTLKDELGMSTQQYSYVVAAFQVGYTI 60 ++ IKGLRW++I LV LGT+ YL RN++ APTL +EL +STQQYSY++AA+ YT+ Sbjct: 41 MRKIKGLRWYMIALVTLGTVLGYLTRNTVAAAAPTLMEELNISTQQYSYIIAAYSAAYTV 100 Query: 61 MQPVCGFIVDLIGLRIGFALFGVLWSVAGVLHAGATGWLSLAGFRALMGLTEAAAIPSGM 120 MQPV G+++D++G +IG+A+F VLW+V A A W LA R +G EAA IP+G+ Sbjct: 101 MQPVAGYVLDVLGTKIGYAMFAVLWAVFCGATALAGSWGGLAVARGAVGAAEAAMIPAGL 160 Query: 121 KAVAEWFPDKEKSVAVGWFNSGTSLGAMLAPPLVIFLQIRYGWQSAFVVTGILGFVWAAL 180 KA +EWFP KE+S+AVG+FN G+S+GAM+APPLV++ + + WQ AF+++G L F+WA Sbjct: 161 KASSEWFPAKERSIAVGYFNVGSSIGAMIAPPLVVWAIVMHSWQMAFIISGALSFIWAMA 220 Query: 181 WFAFYRSPRDHAALSDSERETIISGQ--LRPVSAVRGKRPVKDVVRSRRFWAIALARFFA 238 W FY+ PRD L+D ER+ II+GQ VS + K V ++R+R+FW IAL RF A Sbjct: 221 WLIFYKHPRDQKHLTDEERDYIINGQEAQHQVSTAK-KMSVGQILRNRQFWGIALPRFLA 279 Query: 239 EPAWQTFSFWIPLYFVNERHLDLKSIAMFAWLPFLAADLGGLAGGYLSPFLINRFRIPLV 298 EPAW TF+ WIPL+ +LK IAMFAW+P L ADLG + GGYL P F + L+ Sbjct: 280 EPAWGTFNAWIPLFMFKVYGFNLKEIAMFAWMPMLFADLGCILGGYLPPLFQRWFGVNLI 339 Query: 299 WSRVCGVVLGAVMMIGPACVGLVASPYVAIALFCVGGFAHQMISGLVNTLSADVFDPEEV 358 SR V LGAV+MIGP +GL +PYVAI L C+GGFAHQ +SG + TLS+DVF EV Sbjct: 340 VSRKMVVTLGAVLMIGPGMIGLFTNPYVAIMLLCIGGFAHQALSGALITLSSDVFGRNEV 399 Query: 359 GTASGFAGMSAWIGGLGFSLLVGALADTVGYGPLFGMLGAFDLIGAVLLIILIRGQSTEE 418 TA+G GMSAW+ F+L+VGALADT+G+ PLF +L FDL+GA+++ +++ + E Sbjct: 400 ATANGLTGMSAWLASTLFALVVGALADTIGFSPLFAVLAVFDLLGALVIWTVLQNKPAIE 459 Query: 419 RAARS 423 A + Sbjct: 460 VAQET 464