BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0039.0118.p (276 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc2962 [Q] COG1127 ABC-type transport system involved in resist... 351 1e-96 NMB1966 [Q] COG1127 ABC-type transport system involved in resist... 301 1e-81 NMA0485 [Q] COG1127 ABC-type transport system involved in resist... 301 1e-81 VC2520 [Q] COG1127 ABC-type transport system involved in resista... 299 5e-81 PA4456 [Q] COG1127 ABC-type transport system involved in resista... 296 5e-80 >RSc2962 [Q] COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component Rso Ralstonia solanacearum Length = 279 Score = 351 bits (900), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 179/273 (65%), Positives = 211/273 (77%), Gaps = 11/273 (4%) Query: 4 IVEIRDLHFRY--GDRPILSGLHMDFPRGKVVAVMGGSGSGKTTILRLIGGQLRPQQGKV 61 +VE+ + F Y G R ILSGL M P+G VVAVMGGSG GKTT+LRLIGGQ+ G V Sbjct: 9 VVELDQVDFAYQPGARRILSGLCMRVPKGSVVAVMGGSGCGKTTVLRLIGGQVAAASGAV 68 Query: 62 EVDGENVPDLATKQLFLLRRKMGMLFQNGALFTDMTVFDNVAFPLREHTDLDETLIRDLV 121 V G ++ + L+ RR+MGMLFQ GALF+DM+VFDNVAFPLREHT+L + LIRDLV Sbjct: 69 RVHGADIGAMDKPALYAARRQMGMLFQFGALFSDMSVFDNVAFPLREHTELPDLLIRDLV 128 Query: 122 LMKLNAVGLRNAASLKPAEISGGMARRVXSLKPAEISGGMRAIALDPALIMYDEPFAGLD 181 LMKLNAVGLR A L P++ISGGMARRV RAIALDP+LI+YDEPFAGLD Sbjct: 129 LMKLNAVGLRGARDLMPSQISGGMARRVAL---------ARAIALDPSLILYDEPFAGLD 179 Query: 182 PISMGVTANLIRRLNDALGSTSILVSHDVNESFAIADHVYFLSAGKIVAQGRPEELRSST 241 PIS+G+TA+LIR LNDALG+TSI+VSHDV E+F IAD+VYF++ G I A+G P EL +ST Sbjct: 180 PISLGLTASLIRSLNDALGATSIIVSHDVQETFQIADYVYFVANGGIAAEGTPAELSAST 239 Query: 242 DPYVRQFVHAEADGPVPFHYPGKSLAEDLGLGG 274 DP+VRQFVH E DGPVPFHYPG LAED G+GG Sbjct: 240 DPFVRQFVHGEPDGPVPFHYPGVPLAEDFGVGG 272 >NMB1966 [Q] COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component Nme Neisseria meningitidis MC58 Length = 266 Score = 301 bits (770), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 147/267 (55%), Positives = 197/267 (73%), Gaps = 10/267 (3%) Query: 5 VEIRDLHFRYGDRPILSGLHMDFPRGKVVAVMGGSGSGKTTILRLIGGQLRPQQGKVEVD 64 +E++D+ F YGDRPIL ++ P+G AVMGGSGSGKTT++RLI GQ+RPQ G+V ++ Sbjct: 7 IEMKDVAFAYGDRPILKNINFSIPQGNFAAVMGGSGSGKTTLMRLITGQIRPQSGQVLIE 66 Query: 65 GENVPDLATKQLFLLRRKMGMLFQNGALFTDMTVFDNVAFPLREHTDLDETLIRDLVLMK 124 G ++ + +L+ RR+MG+LFQ+GALFTD++VFDN+AFP+RE T L E +IRDLVL+K Sbjct: 67 GRDLAGFSADELYEHRRRMGVLFQHGALFTDLSVFDNIAFPMRELTRLPEAVIRDLVLLK 126 Query: 125 LNAVGLRNAASLKPAEISGGMARRVXSLKPAEISGGMRAIALDPALIMYDEPFAGLDPIS 184 LNAVGLR +L P+E+SGGM+RRV R IALDP +++YDEPF GLDPIS Sbjct: 127 LNAVGLRGVENLMPSELSGGMSRRVAL---------ARTIALDPEIMLYDEPFTGLDPIS 177 Query: 185 MGVTANLIRRLNDALGSTSILVSHDVNESFAIADHVYFLSAGKIVAQGRPEELRSSTDPY 244 +GV A+LI R+N AL STSI+V+HD+ +S I D V FL+ G+I+ G P+E+R P+ Sbjct: 178 LGVIAHLISRVNKALRSTSIMVTHDIEKSLEIVDQVIFLAHGEIMFSGSPQEMRELDSPW 237 Query: 245 VRQFVHAEADGPVPFHYPGK-SLAEDL 270 VRQFV ADGPV + YP + SL +DL Sbjct: 238 VRQFVGGLADGPVAYRYPAQTSLQQDL 264 >NMA0485 [Q] COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component NmA Neisseria meningitidis Z2491 Length = 286 Score = 301 bits (770), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 147/267 (55%), Positives = 198/267 (74%), Gaps = 10/267 (3%) Query: 5 VEIRDLHFRYGDRPILSGLHMDFPRGKVVAVMGGSGSGKTTILRLIGGQLRPQQGKVEVD 64 +E++D+ F YGDRPIL+ ++ P+G AVMGGSGSGKTT++RLI GQ+RPQ GKV ++ Sbjct: 27 IEMKDVAFAYGDRPILNDINFSIPQGNFAAVMGGSGSGKTTLMRLITGQIRPQSGKVLIE 86 Query: 65 GENVPDLATKQLFLLRRKMGMLFQNGALFTDMTVFDNVAFPLREHTDLDETLIRDLVLMK 124 G ++ + +L+ RR+MG+LFQ+GALFTD++VFDN+AFP+RE T L E +IRDLVL+K Sbjct: 87 GRDLAGFSADELYEHRRRMGVLFQHGALFTDLSVFDNIAFPMRELTRLPEAVIRDLVLLK 146 Query: 125 LNAVGLRNAASLKPAEISGGMARRVXSLKPAEISGGMRAIALDPALIMYDEPFAGLDPIS 184 LNAVGLR +L P+E+SGGM+RRV R IALDP +++YDEPF GLDPIS Sbjct: 147 LNAVGLRGVENLMPSELSGGMSRRVAL---------ARTIALDPEIMLYDEPFTGLDPIS 197 Query: 185 MGVTANLIRRLNDALGSTSILVSHDVNESFAIADHVYFLSAGKIVAQGRPEELRSSTDPY 244 +GV A+LI R+N AL STS++V+HD+ +S I D V FL+ G+I+ G P+E+R P+ Sbjct: 198 LGVIAHLISRVNKALRSTSVMVTHDIEKSLEIVDQVIFLAHGEIMFSGSPQEMRELDSPW 257 Query: 245 VRQFVHAEADGPVPFHYPGK-SLAEDL 270 VRQFV ADGPV + YP + SL +DL Sbjct: 258 VRQFVGGLADGPVAYRYPAQTSLQQDL 284 >VC2520 [Q] COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component Vch Vibrio cholerae Length = 267 Score = 299 bits (765), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 153/268 (57%), Positives = 198/268 (73%), Gaps = 9/268 (3%) Query: 3 NIVEIRDLHFRYGDRPILSGLHMDFPRGKVVAVMGGSGSGKTTILRLIGGQLRPQQGKVE 62 ++V I++L F R I + + P+GKV A+MG SG GKTT+LRLIGGQL P+QG++ Sbjct: 5 DLVTIKNLRFSRSQRVIFDDIDLHVPKGKVTAIMGPSGIGKTTLLRLIGGQLLPEQGEIW 64 Query: 63 VDGENVPDLATKQLFLLRRKMGMLFQNGALFTDMTVFDNVAFPLREHTDLDETLIRDLVL 122 DGEN+P L+ ++L+ R+KM MLFQ+GALFTD+ VFDNVA+PLREHT+LDE +I+ LVL Sbjct: 65 FDGENIPTLSRRKLYRARKKMSMLFQSGALFTDLNVFDNVAYPLREHTELDEAMIKTLVL 124 Query: 123 MKLNAVGLRNAASLKPAEISGGMARRVXSLKPAEISGGMRAIALDPALIMYDEPFAGLDP 182 +KL AVGLR AA L P+E+SGGMARR + AIALDP LIMYDEPF G DP Sbjct: 125 LKLEAVGLRGAAYLMPSELSGGMARRAALAR---------AIALDPELIMYDEPFVGQDP 175 Query: 183 ISMGVTANLIRRLNDALGSTSILVSHDVNESFAIADHVYFLSAGKIVAQGRPEELRSSTD 242 I+MGV LIR LN ALG TS++VSHDV E +IAD VY L+ GK++AQG P+ LR + D Sbjct: 176 ITMGVLVELIRNLNRALGVTSVVVSHDVPEVMSIADWVYLLADGKVIAQGSPQALRDNPD 235 Query: 243 PYVRQFVHAEADGPVPFHYPGKSLAEDL 270 P V+QF+ +ADGPVPF +P + + ++L Sbjct: 236 PRVQQFLCGDADGPVPFRFPAQPIEQEL 263 >PA4456 [Q] COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component Pae Pseudomonas aeruginosa Length = 269 Score = 296 bits (757), Expect = 5e-80, Method: Compositional matrix adjust. Identities = 146/266 (54%), Positives = 188/266 (70%), Gaps = 9/266 (3%) Query: 5 VEIRDLHFRYGDRPILSGLHMDFPRGKVVAVMGGSGSGKTTILRLIGGQLRPQQGKVEVD 64 VE++ L F+ G R I + + PRGKV +MG SG GKTT+LRLI QLRP +G+V V+ Sbjct: 9 VELKGLTFKRGSRAIFDNIDVRIPRGKVTGIMGPSGCGKTTLLRLIASQLRPSKGEVWVN 68 Query: 65 GENVPDLATKQLFLLRRKMGMLFQNGALFTDMTVFDNVAFPLREHTDLDETLIRDLVLMK 124 G+N+P L+ LF +R++ G+LFQ+GALFTD+ VF+NVAFPLR HT L E +IRD+VLMK Sbjct: 69 GQNLPQLSRGDLFDMRKQFGVLFQSGALFTDLDVFENVAFPLRVHTQLPEEMIRDIVLMK 128 Query: 125 LNAVGLRNAASLKPAEISGGMARRVXSLKPAEISGGMRAIALDPALIMYDEPFAGLDPIS 184 L AVGLR A L P E+SGGM RRV RAIALDP +++YDEPF G DPI+ Sbjct: 129 LQAVGLRGAVELMPDELSGGMKRRVAL---------ARAIALDPQILLYDEPFVGQDPIA 179 Query: 185 MGVTANLIRRLNDALGSTSILVSHDVNESFAIADHVYFLSAGKIVAQGRPEELRSSTDPY 244 MGV LIR LNDALG TSI+VSHD+ E+ +IAD++Y + G+++ G P+ L+ + DP Sbjct: 180 MGVLVRLIRLLNDALGITSIVVSHDLAETASIADYIYIVGDGRVLGHGTPDVLKETDDPR 239 Query: 245 VRQFVHAEADGPVPFHYPGKSLAEDL 270 +RQFV DGPVPFHYP + DL Sbjct: 240 IRQFVKGIPDGPVPFHYPARDYRADL 265