BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0039.0115.p (246 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc2959 [M] COG2853 Surface lipoprotein Rso Ralstonia solanacearum 218 1e-56 PA2800 [M] COG2853 Surface lipoprotein Pae Pseudomonas aeruginosa 190 3e-48 XF0416 [M] COG2853 Surface lipoprotein Xfa Xylella fastidiosa 9a5c 157 1e-38 ZvacJ [M] COG2853 Surface lipoprotein EcZ Escherichia coli O157:... 155 5e-38 ECs3229 [M] COG2853 Surface lipoprotein Ecs Escherichia coli O15... 155 5e-38 >RSc2959 [M] COG2853 Surface lipoprotein Rso Ralstonia solanacearum Length = 269 Score = 218 bits (554), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 118/234 (50%), Positives = 150/234 (64%), Gaps = 5/234 (2%) Query: 17 IALAAAVMTGCASTSN-NPNDPLEGFNRTMFSFNDTVDKVALKPAAQAYDAVVPSPVQRG 75 +A +A ++ GCA+ N NP DP+E FNR +F ND +DK LKP AQ Y VVPSP + Sbjct: 17 MAASAVLLAGCATGPNANPADPIEPFNREVFRINDDLDKGVLKPVAQTYVDVVPSPARTA 76 Query: 76 VGNFFGNIGDLWSSVNQLLQGRIEQGVSTFMRVAINTTFGLGGVLDVATEARLPREKSDF 135 V NFF N GD++S+VN LLQ + + MRVAINT GLGG++D+A++A LP+ K DF Sbjct: 77 VSNFFSNAGDVYSAVNNLLQLKGTAALEDTMRVAINTVLGLGGLIDIASDAGLPKHKEDF 136 Query: 136 GQTLGKWGVGSGPYVVLPFFGPSTLRDTAGMPVDLYGDLWTYKRPTRWRNVGTVVRIVDR 195 GQTLG WGV +G Y+V P GPST+RDTAG VD D TY + +R+VD Sbjct: 137 GQTLGVWGVPAGAYIVWPLLGPSTVRDTAGFLVDWQLDPLTYFNNSAVTYSLAALRVVDA 196 Query: 196 RAQLLDASTLLEDAALDKYDFVRDAYLQRRQSQINGAG----GSGKDRPENAIQ 245 RA LL +LE+AA+DKY F+RDAYLQRR+ I GK+ PE A Q Sbjct: 197 RAGLLGVGNVLEEAAVDKYTFMRDAYLQRRRYLIYDGNLPEDTDGKNPPEGAEQ 250 >PA2800 [M] COG2853 Surface lipoprotein Pae Pseudomonas aeruginosa Length = 234 Score = 190 bits (482), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 100/213 (46%), Positives = 128/213 (60%), Gaps = 3/213 (1%) Query: 17 IALAAAVMTGCASTSNNPNDPLEGFNRTMFSFNDTVDKVALKPAAQAYDAVVPSPVQRGV 76 +A A+ + S + + DP E NR +F+FNDT+D ALKP AQ Y V P+ VQ GV Sbjct: 16 LACASLALAPTLSLAASEEDPWESINRPIFTFNDTLDTYALKPLAQGYQKVTPNFVQDGV 75 Query: 77 GNFFGNIGDLWSSVNQLLQGRIEQGVSTFMRVAINTTFGLGGVLDVATEARLPREKSDFG 136 NFF N+GD+ + N LLQ + R+ N+TFGL G++DVAT L R DFG Sbjct: 76 HNFFNNLGDVKNLANNLLQAKFHNAGVDTSRLLFNSTFGLAGLIDVATPMGLQRNDEDFG 135 Query: 137 QTLGKWGVGSGPYVVLPFFGPSTLRDTAGMPVDLYGDLWTYKRPTRWRNVGTVVRIVDRR 196 QTLG WGVGSGPYV+LPF GPSTLRD D+Y + Y R RNV + VD R Sbjct: 136 QTLGYWGVGSGPYVMLPFLGPSTLRDAPAKIPDIYVSPYHYMDDVRARNVMFGINTVDTR 195 Query: 197 AQLLDASTLLEDAALDKYDFVRDAYLQRRQSQI 229 A LL + L+ DKY F+R+AYLQ R+ ++ Sbjct: 196 ANLLKSEKLISG---DKYIFIRNAYLQNREFKV 225 >XF0416 [M] COG2853 Surface lipoprotein Xfa Xylella fastidiosa 9a5c Length = 351 Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 97/246 (39%), Positives = 131/246 (53%), Gaps = 14/246 (5%) Query: 10 YASRLGAIALAAAVMTGCASTSNNPN--------DPLEGFNRTMFSFNDTVDKVALKPAA 61 YA+ GAI+ + G + T+N P DP E +NR M FN +D+ +P A Sbjct: 87 YAALYGAISPSV----GHSGTNNIPKPNDTHTTYDPWERYNRAMHQFNVVIDRNLARPLA 142 Query: 62 QAYDAVVPSPVQRGVGNFFGNIGDLWSSVNQLLQGRIEQGVSTFMRVAINTTFGLGGVLD 121 AY VVP Q GV NFF N+ + VNQ+LQ + T R +N+T GLGG+LD Sbjct: 143 NAYVHVVPKKAQVGVTNFFNNLSSPLTMVNQVLQNHPVYALQTLGRFLLNSTLGLGGILD 202 Query: 122 VATEARLPREKSDFGQTLGKWGVGSGPYVVLPFFGPSTLRDTAGMPVDLYGDLWTYKRPT 181 A+ A++PR +FGQTL WG + Y LP FGP T+RDT G+ DL L Sbjct: 203 PASAAKIPRRTENFGQTLALWGWYNSRYFELPLFGPRTVRDTFGLAGDLPLSLLRRIDNN 262 Query: 182 RWRNVGTVVRIVDRRAQLLDASTLLEDAALDKYDFVRDAYLQRRQSQI-NGAGGSGKDRP 240 WR +++VD RA+LL + D A+D Y RDA+LQRR QI N + +D Sbjct: 263 TWRYSLQGLQLVDTRARLLSFDN-MRDGAVDDYALTRDAWLQRRNYQIQNALRKNNQDTN 321 Query: 241 ENAIQP 246 +N+ P Sbjct: 322 DNSELP 327 >ZvacJ [M] COG2853 Surface lipoprotein EcZ Escherichia coli O157:H7 EDL933 Length = 251 Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 102/243 (41%), Positives = 138/243 (56%), Gaps = 14/243 (5%) Query: 13 RLGAIALAAAVMTGCASTSNNP---NDPLEGFNRTMFSFN-DTVDKVALKPAAQAYDAVV 68 RL A+AL ++ GCAS+ + +DPLEGFNRTM++FN + +D ++P A A+ V Sbjct: 4 RLSALALGTTLLVGCASSGTDQQGRSDPLEGFNRTMYNFNFNVLDPYIVRPVAVAWRDYV 63 Query: 69 PSPVQRGVGNFFGNIGDLWSSVNQLLQGRIEQGVSTFMRVAINTTFGLGGVLDVATEA-- 126 P P + G+ NF GN+ + VN LQG QG+ F R +NT G+GG +DVA A Sbjct: 64 PQPARNGLSNFTGNLEEPAVMVNYFLQGDPYQGMVHFTRFFLNTILGMGGFIDVAGMANP 123 Query: 127 RLPR-EKSDFGQTLGKWGVGSGPYVVLPFFGPSTLRDTAGMPVDLYGDLWTYKRPTRW-R 184 +L R E FG TLG +GVG GPYV LPF+G TLRD G D+ L+ W Sbjct: 124 KLQRTEPHRFGSTLGHYGVGYGPYVQLPFYGSFTLRDDGG---DMADGLYPVLSWLTWPM 180 Query: 185 NVGT-VVRIVDRRAQLLDASTLLEDAALDKYDFVRDAYLQRRQSQINGAGGSGKDRPE-N 242 +VG + ++ RAQLLD+ LL ++ D Y VR+AY QR NG ++ P Sbjct: 181 SVGKWTLEGIETRAQLLDSDGLLRQSS-DPYIMVREAYFQRHDFIANGGELKPQENPNAQ 239 Query: 243 AIQ 245 AIQ Sbjct: 240 AIQ 242 >ECs3229 [M] COG2853 Surface lipoprotein Ecs Escherichia coli O157:H7 Length = 251 Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 102/243 (41%), Positives = 138/243 (56%), Gaps = 14/243 (5%) Query: 13 RLGAIALAAAVMTGCASTSNNP---NDPLEGFNRTMFSFN-DTVDKVALKPAAQAYDAVV 68 RL A+AL ++ GCAS+ + +DPLEGFNRTM++FN + +D ++P A A+ V Sbjct: 4 RLSALALGTTLLVGCASSGTDQQGRSDPLEGFNRTMYNFNFNVLDPYIVRPVAVAWRDYV 63 Query: 69 PSPVQRGVGNFFGNIGDLWSSVNQLLQGRIEQGVSTFMRVAINTTFGLGGVLDVATEA-- 126 P P + G+ NF GN+ + VN LQG QG+ F R +NT G+GG +DVA A Sbjct: 64 PQPARNGLSNFTGNLEEPAVMVNYFLQGDPYQGMVHFTRFFLNTILGMGGFIDVAGMANP 123 Query: 127 RLPR-EKSDFGQTLGKWGVGSGPYVVLPFFGPSTLRDTAGMPVDLYGDLWTYKRPTRW-R 184 +L R E FG TLG +GVG GPYV LPF+G TLRD G D+ L+ W Sbjct: 124 KLQRTEPHRFGSTLGHYGVGYGPYVQLPFYGSFTLRDDGG---DMADGLYPVLSWLTWPM 180 Query: 185 NVGT-VVRIVDRRAQLLDASTLLEDAALDKYDFVRDAYLQRRQSQINGAGGSGKDRPE-N 242 +VG + ++ RAQLLD+ LL ++ D Y VR+AY QR NG ++ P Sbjct: 181 SVGKWTLEGIETRAQLLDSDGLLRQSS-DPYIMVREAYFQRHDFIANGGELKPQENPNAQ 239 Query: 243 AIQ 245 AIQ Sbjct: 240 AIQ 242