BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0039.0113.p         (80 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc2958 [Q] COG2854 ABC-type transport system involved in resist...    75   4e-14

>RSc2958 [Q] COG2854 ABC-type transport system involved in resistance to
           organic solvents, auxiliary component Rso Ralstonia
           solanacearum
          Length = 211

 Score = 75.1 bits (183), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 32/62 (51%), Positives = 45/62 (72%), Gaps = 1/62 (1%)

Query: 13  GEPIQLSYRLEKKGDGWKLYDVNVLGAWLVEAYKGTFSNEINK-GGIDGLIKALSDKNKQ 71
           GEP+ L YR+EK  +GWK+YD+N+ G WL E YK  F+  I+K GG+ GL++ L ++N Q
Sbjct: 145 GEPVALDYRMEKSANGWKVYDINISGLWLSETYKNQFAEVISKRGGVSGLVQFLDERNAQ 204

Query: 72  LA 73
           LA
Sbjct: 205 LA 206