BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0039.0091.p         (78 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc2352 [GEPR] COG0477 Permeases of the major facilitator superf...   102   3e-22
BMEII1096 [GEPR] COG0477 Permeases of the major facilitator supe...    93   2e-19
YPO2237 [GEPR] COG0477 Permeases of the major facilitator superf...    87   8e-18
RSp1572 [GEPR] COG0477 Permeases of the major facilitator superf...    85   4e-17
AGc4908 [GEPR] COG0477 Permeases of the major facilitator superf...    82   3e-16

>RSc2352 [GEPR] COG0477 Permeases of the major facilitator superfamily Rso
          Ralstonia solanacearum
          Length = 442

 Score =  102 bits (253), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 45/65 (69%), Positives = 57/65 (87%)

Query: 13 DGLYKKVTWKILPWLLLGYVIAYLDRVNVGFAKLSMLSDLGMSEAAYGLGAGIFFLGYFI 72
          +  Y+KV+W+++P+LLL YV+AYLDRVNVGFAKL ML+DL  SE  YGLGAGIFF+GYF+
Sbjct: 25 EATYRKVSWRLIPFLLLCYVVAYLDRVNVGFAKLQMLNDLKFSETVYGLGAGIFFIGYFL 84

Query: 73 FEVPA 77
          FEVP+
Sbjct: 85 FEVPS 89


>BMEII1096 [GEPR] COG0477 Permeases of the major facilitator superfamily Bme
          Brucella melitensis
          Length = 451

 Score = 92.8 bits (229), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 41/63 (65%), Positives = 53/63 (84%)

Query: 16 YKKVTWKILPWLLLGYVIAYLDRVNVGFAKLSMLSDLGMSEAAYGLGAGIFFLGYFIFEV 75
          Y+KV ++I+P L++ Y+IAYLDRVNVGFAKL M  +LG SEA YGLGAG+FF+GYF FE+
Sbjct: 37 YRKVAFRIIPLLMICYIIAYLDRVNVGFAKLQMSEELGFSEAIYGLGAGLFFIGYFFFEI 96

Query: 76 PAT 78
          P+ 
Sbjct: 97 PSN 99


>YPO2237 [GEPR] COG0477 Permeases of the major facilitator superfamily Ype
          Yersinia pestis
          Length = 436

 Score = 87.4 bits (215), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 41/75 (54%), Positives = 53/75 (70%), Gaps = 1/75 (1%)

Query: 5  SQGSAVQFDG-LYKKVTWKILPWLLLGYVIAYLDRVNVGFAKLSMLSDLGMSEAAYGLGA 63
          SQ + +Q +   Y+K  W +LP L+L YV+ YLDRVNVGFAKL M  DL  S+  YGLGA
Sbjct: 10 SQPTQLQEENNAYRKTVWHLLPLLMLCYVLNYLDRVNVGFAKLQMADDLQFSDTVYGLGA 69

Query: 64 GIFFLGYFIFEVPAT 78
          G+FF+GYF  E+P+ 
Sbjct: 70 GMFFIGYFFLEIPSN 84


>RSp1572 [GEPR] COG0477 Permeases of the major facilitator superfamily Rso
          Ralstonia solanacearum
          Length = 433

 Score = 85.1 bits (209), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 41/75 (54%), Positives = 53/75 (70%)

Query: 4  ASQGSAVQFDGLYKKVTWKILPWLLLGYVIAYLDRVNVGFAKLSMLSDLGMSEAAYGLGA 63
          A   S  +   +Y  V  +ILP+L   Y+ AYLDR+N+GFAKL M +DL +S+AAYGLGA
Sbjct: 8  AQAHSGERSTSVYSVVNRRILPFLATCYLFAYLDRINIGFAKLQMQNDLALSDAAYGLGA 67

Query: 64 GIFFLGYFIFEVPAT 78
          GIFF GY +FEVP+ 
Sbjct: 68 GIFFFGYMLFEVPSN 82


>AGc4908 [GEPR] COG0477 Permeases of the major facilitator superfamily Atu
           Agrobacterium tumefaciens strain C58 (Cereon)
          Length = 487

 Score = 82.0 bits (201), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 38/69 (55%), Positives = 52/69 (75%)

Query: 10  VQFDGLYKKVTWKILPWLLLGYVIAYLDRVNVGFAKLSMLSDLGMSEAAYGLGAGIFFLG 69
           V    L  K+TW+++P+L L Y+IAY+DR NV +AKL M+  L +SE AYGLGA +FF+G
Sbjct: 64  VSEKALISKITWRLMPFLGLLYLIAYIDRQNVSYAKLQMVDALSLSEYAYGLGASLFFIG 123

Query: 70  YFIFEVPAT 78
           YF+FEVP+ 
Sbjct: 124 YFLFEVPSN 132