BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0039.0052.p         (59 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSp0227 [IQ] COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid...    64   1e-10
AGc2614 [IQ] COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid...    63   1e-10

>RSp0227 [IQ] COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
           Rso Ralstonia solanacearum
          Length = 624

 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 30/54 (55%), Positives = 38/54 (70%)

Query: 1   VTRALVLVDPPSFDRGEITDKGSINQRAVLTHRAALVETLYAGTDPAVLTVQAA 54
           + R  +L + PS D GE+TDKGSINQRAVL  RAAL+E +YAG D  V+  + A
Sbjct: 568 IARLRLLEEAPSLDHGEVTDKGSINQRAVLARRAALIEAIYAGGDGKVMLAEPA 621


>AGc2614 [IQ] COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
           Atu Agrobacterium tumefaciens strain C58 (Cereon)
          Length = 591

 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 32/51 (62%), Positives = 38/51 (74%), Gaps = 1/51 (1%)

Query: 1   VTRALVLVDPPSFDRGEITDKGSINQRAVLTHRAALVETLYAGTDPAVLTV 51
           V R LV+ D   F++GE+TDKGSINQRAVL HR  LVE+LY G  P V+TV
Sbjct: 536 VMRILVMEDALRFEKGEVTDKGSINQRAVLLHRKELVESLY-GDTPQVITV 585