BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0039.0040.p         (170 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc2246 [E] COG0411 ABC-type branched-chain amino acid transport...   250   1e-66
SMb20785 [E] COG0411 ABC-type branched-chain amino acid transpor...   157   1e-38
AGl707 [E] COG0411 ABC-type branched-chain amino acid transport ...   141   5e-34
BMEII0066 [E] COG0411 ABC-type branched-chain amino acid transpo...   139   2e-33
BMEII0629 [E] COG0411 ABC-type branched-chain amino acid transpo...   127   9e-30

>RSc2246 [E] COG0411 ABC-type branched-chain amino acid transport systems,
           ATPase component Rso Ralstonia solanacearum
          Length = 257

 Score =  250 bits (638), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 123/170 (72%), Positives = 142/170 (83%)

Query: 1   MTRTFQINTLFAGLTVLESVVLAIQERRGLQYKWYQTVASQTEVVDEAMALLASLKLAQE 60
           +TRTFQINTLF GLTVLESV+LAI ER G  + W++TVA+ T   DEAMALL  L+L  +
Sbjct: 88  ITRTFQINTLFPGLTVLESVMLAIFERTGASWHWHRTVAAHTAARDEAMALLGRLQLGAD 147

Query: 61  ANSLTRNLAYGKQRLVEIALALATQPKVLLLDEPAAGIPSAESRELFEVIAQLPREVTIV 120
           A+S T  L YGKQRL+EIALALAT P++LLLDEPAAGIP+ ES ELFEVIA LPR++TI+
Sbjct: 148 ASSPTHALPYGKQRLLEIALALATLPRILLLDEPAAGIPAGESAELFEVIAGLPRDITIL 207

Query: 121 FIEHDMGLVFRFAERITVLVGGKVLVEGTPAEIAADPRVKEVYLGEAEHA 170
           FIEHDM LVFRFAERI+VLV G+VL EGTP EIAADPRV+EVYLGEA H 
Sbjct: 208 FIEHDMNLVFRFAERISVLVAGRVLTEGTPQEIAADPRVREVYLGEAAHG 257


>SMb20785 [E] COG0411 ABC-type branched-chain amino acid transport systems,
           ATPase component Sme Sinorhizobium meliloti
          Length = 254

 Score =  157 bits (397), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 76/170 (44%), Positives = 113/170 (66%)

Query: 1   MTRTFQINTLFAGLTVLESVVLAIQERRGLQYKWYQTVASQTEVVDEAMALLASLKLAQE 60
           + R+FQ+  LF  +T  E V LA+ +R G   + +    +   V+ EA +LL  L L   
Sbjct: 81  LVRSFQVTRLFQDMTPAEHVALAVLQRDGRAGRMFGNFLAMPGVMAEAGSLLGKLGLRDL 140

Query: 61  ANSLTRNLAYGKQRLVEIALALATQPKVLLLDEPAAGIPSAESRELFEVIAQLPREVTIV 120
           A+   R +AYG+QRL+EIA+ALA +P+VLLLDEPAAG+P +++  + + +A LP ++ ++
Sbjct: 141 AHRPVREIAYGQQRLLEIAVALALKPRVLLLDEPAAGVPQSDTGRIEQALADLPDDLAVL 200

Query: 121 FIEHDMGLVFRFAERITVLVGGKVLVEGTPAEIAADPRVKEVYLGEAEHA 170
            IEHDM LVFRFA+R+ VL  G V+ +G+PA++  DPRV+E YLG    A
Sbjct: 201 MIEHDMDLVFRFAKRVIVLAAGTVIFDGSPADVTKDPRVREAYLGSYADA 250


>AGl707 [E] COG0411 ABC-type branched-chain amino acid transport systems,
           ATPase component Atu Agrobacterium tumefaciens strain
           C58 (Cereon)
          Length = 254

 Score =  141 bits (356), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 73/170 (42%), Positives = 111/170 (65%)

Query: 1   MTRTFQINTLFAGLTVLESVVLAIQERRGLQYKWYQTVASQTEVVDEAMALLASLKLAQE 60
           + R+FQ+  LF  +T  E V LAI +R G   + +    +   V+ EA  +L +L L   
Sbjct: 81  LVRSFQVTRLFQDMTPEEHVALAILQREGKTGRIFGRYRAMPSVMSEARDILGTLGLLAL 140

Query: 61  ANSLTRNLAYGKQRLVEIALALATQPKVLLLDEPAAGIPSAESRELFEVIAQLPREVTIV 120
           A +  R +AYG+QRL+EIALA+A +PK+LLLDEPAAG+PS E+  + + + +LP ++ I+
Sbjct: 141 AETRVREIAYGQQRLIEIALAMALRPKILLLDEPAAGVPSTETARIEQALDRLPADLAIL 200

Query: 121 FIEHDMGLVFRFAERITVLVGGKVLVEGTPAEIAADPRVKEVYLGEAEHA 170
            IEHDM LVFRFA R+ VL  G V+ +G+P ++ ++  V++ YLG   +A
Sbjct: 201 MIEHDMDLVFRFARRVVVLAAGAVIFDGSPEDVTSNAEVRQAYLGSYANA 250


>BMEII0066 [E] COG0411 ABC-type branched-chain amino acid transport systems,
           ATPase component Bme Brucella melitensis
          Length = 251

 Score =  139 bits (351), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 67/169 (39%), Positives = 110/169 (65%)

Query: 1   MTRTFQINTLFAGLTVLESVVLAIQERRGLQYKWYQTVASQTEVVDEAMALLASLKLAQE 60
           + R+FQI  +F GLTV E++ LA+  R  +Q+ +++ V+S  +V  E  +LL  ++L   
Sbjct: 83  LARSFQITNIFPGLTVFENIRLAVMRRYKVQFTFWRPVSSMRKVTAEVESLLEQVRLTAR 142

Query: 61  ANSLTRNLAYGKQRLVEIALALATQPKVLLLDEPAAGIPSAESRELFEVIAQLPREVTIV 120
           A +L   L+Y +QR +EI + LA+ P++++LDEP AG+   E+     +I ++ +  T++
Sbjct: 143 AYTLASQLSYSEQRSLEIGMTLASDPRLIILDEPMAGMSQEETDYTVGLIREITQNRTLM 202

Query: 121 FIEHDMGLVFRFAERITVLVGGKVLVEGTPAEIAADPRVKEVYLGEAEH 169
            +EHDM +VF  A+RI+VLV G+++  GTP EI  + RV+E YLGE  H
Sbjct: 203 IVEHDMYVVFTLADRISVLVYGEIIATGTPKEIRENARVREAYLGEEAH 251


>BMEII0629 [E] COG0411 ABC-type branched-chain amino acid transport systems,
           ATPase component Bme Brucella melitensis
          Length = 249

 Score =  127 bits (320), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 75/166 (45%), Positives = 105/166 (63%)

Query: 1   MTRTFQINTLFAGLTVLESVVLAIQERRGLQYKWYQTVASQTEVVDEAMALLASLKLAQE 60
           + R+FQ+  LF  +T  E V LAI +R G   +         +V+DEA  +L  L L   
Sbjct: 81  LVRSFQVTRLFFDMTPEEHVALAILQREGKTGRILGNYRRMPQVMDEARDILHMLGLLPL 140

Query: 61  ANSLTRNLAYGKQRLVEIALALATQPKVLLLDEPAAGIPSAESRELFEVIAQLPREVTIV 120
           A      +AYG+QRL+EIALALA +PKVLLLDEPAAG+P +++  + E + +LP ++ ++
Sbjct: 141 AQLRVSEIAYGQQRLLEIALALALRPKVLLLDEPAAGVPQSDTGRIEEALDRLPPDLAVL 200

Query: 121 FIEHDMGLVFRFAERITVLVGGKVLVEGTPAEIAADPRVKEVYLGE 166
            IEHDM LVFRFA+R+ VL  G V+ +G P  +  D RV+E YLG 
Sbjct: 201 MIEHDMDLVFRFAKRVVVLAAGTVIFDGLPQAVVQDARVREAYLGS 246