BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0039.0012.p         (184 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc0412 [R] COG1778 Low specificity phosphatase (HAD superfamily...   194   9e-50
NMB0353 [R] COG1778 Low specificity phosphatase (HAD superfamily...   167   9e-42
NMA2134 [R] COG1778 Low specificity phosphatase (HAD superfamily...   164   9e-41
PA4458 [R] COG1778 Low specificity phosphatase (HAD superfamily)...   160   2e-39
VC2524 [R] COG1778 Low specificity phosphatase (HAD superfamily)...   150   1e-36

>RSc0412 [R] COG1778 Low specificity phosphatase (HAD superfamily) Rso
           Ralstonia solanacearum
          Length = 195

 Score =  194 bits (493), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 98/170 (57%), Positives = 118/170 (69%)

Query: 14  ALEKAAGIRLMIFDVDGVLTDGGLFYGEDGEVFKRFNALDGHGIKMMQQFGTAAAIITAR 73
           A+E+AA +RLMIFDVDGVLTDG L  G  GE+ K F+ LDGHGIK++ Q G   AIIT R
Sbjct: 20  AMERAARVRLMIFDVDGVLTDGRLLVGPQGEISKAFDTLDGHGIKLLAQAGITPAIITGR 79

Query: 74  QSPYVLRRARDLGIAHVFQGVHDKRQAFEQLLQHTGLNADVCGYLGDDVIDLPVLTRVGF 133
           +S  V  RA +LGI H++QGV DKR+AF  LL  T L     GY+GDD  DLPV+ +VGF
Sbjct: 80  ESEIVAWRAGELGIEHLYQGVADKREAFVHLLAATALQPADAGYMGDDWPDLPVMAQVGF 139

Query: 134 KACVANGHREVKLRSHYVTQASGGNGAVREICDLVLAAQGNYEAALAPYL 183
            AC A  H EV+ R HYVT+A GG GA RE+ DL+L AQG Y+  LA  L
Sbjct: 140 AACPAQAHAEVRSRCHYVTRAKGGRGAAREVADLILKAQGAYDDLLAQLL 189


>NMB0353 [R] COG1778 Low specificity phosphatase (HAD superfamily) Nme
           Neisseria meningitidis MC58
          Length = 178

 Score =  167 bits (424), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 80/167 (47%), Positives = 110/167 (65%)

Query: 17  KAAGIRLMIFDVDGVLTDGGLFYGEDGEVFKRFNALDGHGIKMMQQFGTAAAIITARQSP 76
           +AA I+L+I DVDGVLTDG +F  ++GE  K F+ LDGHG+KM+Q  G   AIIT R +P
Sbjct: 11  RAAKIKLLILDVDGVLTDGRIFIRDNGEEIKSFHTLDGHGLKMLQASGVQTAIITGRDAP 70

Query: 77  YVLRRARDLGIAHVFQGVHDKRQAFEQLLQHTGLNADVCGYLGDDVIDLPVLTRVGFKAC 136
            V  R + LGI + F+G+ DKR A+E+L    G+    C ++GDDV+DLPV+ R G    
Sbjct: 71  SVGIRVKQLGINYYFKGISDKRAAYEELRAQAGVEEAECAFVGDDVVDLPVMVRCGLPVA 130

Query: 137 VANGHREVKLRSHYVTQASGGNGAVREICDLVLAAQGNYEAALAPYL 183
           V   H   +  + Y+T+ +GG GAVRE+CDL++ AQG   AAL  Y+
Sbjct: 131 VPGAHWFTRQHAAYITEHAGGAGAVREVCDLIMQAQGTLGAALNEYI 177


>NMA2134 [R] COG1778 Low specificity phosphatase (HAD superfamily) NmA
           Neisseria meningitidis Z2491
          Length = 178

 Score =  164 bits (415), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 79/167 (47%), Positives = 108/167 (64%)

Query: 17  KAAGIRLMIFDVDGVLTDGGLFYGEDGEVFKRFNALDGHGIKMMQQFGTAAAIITARQSP 76
           +AA I+L+I DVDGVLTDG +F  ++GE  K F+ LDGHG+KM+Q  G   AIIT R +P
Sbjct: 11  RAAKIKLLILDVDGVLTDGRIFIRDNGEEIKSFHTLDGHGLKMLQASGVQTAIITGRDAP 70

Query: 77  YVLRRARDLGIAHVFQGVHDKRQAFEQLLQHTGLNADVCGYLGDDVIDLPVLTRVGFKAC 136
            V  R + LGI + F+G+ DKR A+E+L    G+    C ++GDDV+DLPV+ R G    
Sbjct: 71  SVGIRVKQLGINYYFKGISDKRAAYEELRAQVGVEEAECAFVGDDVVDLPVMVRCGLPVA 130

Query: 137 VANGHREVKLRSHYVTQASGGNGAVREICDLVLAAQGNYEAALAPYL 183
           V + H      + Y+ +  GG GAVRE+CDL++ AQG   AAL  Y+
Sbjct: 131 VPDAHWFTLQHAAYIAKRPGGAGAVREVCDLIMQAQGTLGAALNEYI 177


>PA4458 [R] COG1778 Low specificity phosphatase (HAD superfamily) Pae
           Pseudomonas aeruginosa
          Length = 179

 Score =  160 bits (404), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 93/183 (50%), Positives = 116/183 (63%), Gaps = 4/183 (2%)

Query: 1   MTAPSFASTLPAAALEKAAGIRLMIFDVDGVLTDGGLFYGEDGEVFKRFNALDGHGIKMM 60
           M+    A+ LP     +A+ IRL IFDVDGVLTDG L++  DG  FK FN LDGHGIKM+
Sbjct: 1   MSDTHSAAELPV----RASRIRLAIFDVDGVLTDGKLYFLVDGSEFKTFNTLDGHGIKML 56

Query: 61  QQFGTAAAIITARQSPYVLRRARDLGIAHVFQGVHDKRQAFEQLLQHTGLNADVCGYLGD 120
              G   AIIT R +P V RRAR+LGI H++QG  DK    ++LL   GL  +   YLGD
Sbjct: 57  IASGVRTAIITGRDTPVVERRARNLGIQHLYQGREDKLAVLDELLGELGLGYEQVAYLGD 116

Query: 121 DVIDLPVLTRVGFKACVANGHREVKLRSHYVTQASGGNGAVREICDLVLAAQGNYEAALA 180
           D+ DLPV+ RVG    VA+    V+  +H VT A GG GA RE C+L++ AQG  EAA +
Sbjct: 117 DLPDLPVIRRVGLGMAVASADPFVRQHAHGVTAARGGEGAAREFCELIMRAQGTLEAAQS 176

Query: 181 PYL 183
            YL
Sbjct: 177 AYL 179


>VC2524 [R] COG1778 Low specificity phosphatase (HAD superfamily) Vch
           Vibrio cholerae
          Length = 185

 Score =  150 bits (379), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 73/175 (41%), Positives = 108/175 (61%)

Query: 2   TAPSFASTLPAAALEKAAGIRLMIFDVDGVLTDGGLFYGEDGEVFKRFNALDGHGIKMMQ 61
           T  +    +  + LE A  I+L+I DVDGV +DG ++ G  GE  K F+  DG+G+K + 
Sbjct: 4   TVSTLYGEVEPSLLEIAKQIKLLICDVDGVFSDGLIYMGNQGEELKTFHTRDGYGVKALM 63

Query: 62  QFGTAAAIITARQSPYVLRRARDLGIAHVFQGVHDKRQAFEQLLQHTGLNADVCGYLGDD 121
             G   AIIT R+S  V  R + LGI+ ++QG  DK QA+  + Q   +  +  GY+GDD
Sbjct: 64  NAGIEIAIITGRRSQIVENRMKALGISLIYQGQDDKVQAYYDICQKLAIAPEQTGYIGDD 123

Query: 122 VIDLPVLTRVGFKACVANGHREVKLRSHYVTQASGGNGAVREICDLVLAAQGNYE 176
           +ID PV+ +V  + CVA+GH  +  R++YVT   GG+GAVRE+CDL+L A+   +
Sbjct: 124 LIDWPVMEKVALRVCVADGHPLLAQRANYVTHIKGGHGAVREVCDLILQARNELD 178