BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0038.0173.p (1242 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSp0974 [C] COG5013 Nitrate reductase alpha subunit Rso Ralstoni... 2100 0.0 PA3875 [C] COG5013 Nitrate reductase alpha subunit Pae Pseudomon... 1751 0.0 narG [C] COG5013 Nitrate reductase alpha subunit Eco Escherichia... 1744 0.0 STM1764 [C] COG5013 Nitrate reductase alpha subunit Sty Salmonel... 1743 0.0 ZnarG [C] COG5013 Nitrate reductase alpha subunit EcZ Escherichi... 1741 0.0 >RSp0974 [C] COG5013 Nitrate reductase alpha subunit Rso Ralstonia solanacearum Length = 1245 Score = 2100 bits (5441), Expect = 0.0, Method: Compositional matrix adjust. Identities = 997/1240 (80%), Positives = 1089/1240 (87%), Gaps = 4/1240 (0%) Query: 1 MSHFLDRLKFMSRVKSTFANGHGAVVNEDRQWENAYRSRWQHDKVVRSTHGVNCTGSCSW 60 MSHFLDRLKF++ V+STFA+GHGAVVNEDR+WE+ YRSRWQHDK+VRSTHGVNCTGSCSW Sbjct: 1 MSHFLDRLKFLTHVRSTFADGHGAVVNEDRRWEDGYRSRWQHDKIVRSTHGVNCTGSCSW 60 Query: 61 KVYVKNGLITWETQQTDYPRTRPDLPNXGPRGCPRGASYSWYVYSAQRVKYPMIRGRLMK 120 KVYVKNGLITWETQQTDYPRTRPDLPN PRGCPRGASYSWYVYSAQRVK P+IRGRLM+ Sbjct: 61 KVYVKNGLITWETQQTDYPRTRPDLPNHEPRGCPRGASYSWYVYSAQRVKTPLIRGRLMQ 120 Query: 121 LWQEARKTMEPVQAWAAITGDAAKAQHYKSVRGLGGFVRTDWDTANEIIAAANAHTIKEY 180 +W+EARKTM+PV AW +I+ + KA+ YKSVRG GGFVR DWDTA EIIAAANA+TIK Y Sbjct: 121 MWREARKTMDPVAAWESISQNPEKAKRYKSVRGQGGFVRADWDTATEIIAAANAYTIKRY 180 Query: 181 GPDRVVGFSPIPAMSMVSYAAGARYLSLIGGVPLSFYDWYCDLPPASPQVWGEQTDVPES 240 GPDRVVGFSPIPAMSMVSYAAGARYLSLIGGV LSFYDWYCDLPPASPQVWGEQTDVPES Sbjct: 181 GPDRVVGFSPIPAMSMVSYAAGARYLSLIGGVCLSFYDWYCDLPPASPQVWGEQTDVPES 240 Query: 241 ADWYNAGYLMVWGSNVPLTRTPDAHFYTEVRYKGTKTVAVSSDFGEMVKFGDIWLAPRQG 300 ADWYN+ YLMVWGSNVP TRTPDAHFYTEVRYKGTKTVA+SSD+GEMVKFGDIWLAP+QG Sbjct: 241 ADWYNSTYLMVWGSNVPQTRTPDAHFYTEVRYKGTKTVAISSDYGEMVKFGDIWLAPKQG 300 Query: 301 TDAALAMAMGHVVLKEFHLERPSPYFRSYVKQYTDLPMLVRLVE-RDGRYLPEHLLRASQ 359 TDAALAMAMGHVVLKEFH S YFR YVKQYTD+PMLV L E +G Y +H LRAS Sbjct: 301 TDAALAMAMGHVVLKEFHATGKSAYFRDYVKQYTDMPMLVLLREAENGSYTSDHFLRASH 360 Query: 360 LPGQLEEANNADWKTLAIDAATGEIVAPNGSIGYRWGEGQVNDGAKVGRWNLESRDGHSG 419 L G EANN DWKTL IDA TG +V PNG+IG RW E Q + GAKVGRWNLE +D G Sbjct: 361 LAGNHGEANNPDWKTLLIDAPTGRLVVPNGTIGLRWNEAQHDGGAKVGRWNLELKDAADG 420 Query: 420 REIDPLLSLVEAHDEVVAVSFNYFGGDDAEQLLERRVPVRHVRLANGSTARVATVHDLMM 479 IDPLLSL AHDEVV V F YFGG+ +LL RRVPV+ V LA+GSTAR+ATV+DL + Sbjct: 421 AAIDPLLSLTGAHDEVVDVGFPYFGGEHDARLL-RRVPVKRVTLADGSTARIATVYDLQL 479 Query: 480 ANYGVDQGLGG-DVPHSYDDDLPYTPAWQEKHTGVKRELVIQVAREFAQNAHDTEGRSMV 538 ANYGVDQGLGG +V +DDD+PYTPAWQEKHTGV R+ VIQVAREFA NA T G+SMV Sbjct: 480 ANYGVDQGLGGPNVAAGFDDDVPYTPAWQEKHTGVPRQQVIQVAREFADNADRTRGKSMV 539 Query: 539 ILGAALNHWYHNDMIYRGIINLLMMCGCIGKSGGGWAHYVGQEKLRPQFGWAPLAFATDW 598 I+GAALNHWYHNDMIYRGIINLLMMCGCIG+SGGGWAHYVGQEKLRPQFGWAPLAF DW Sbjct: 540 IVGAALNHWYHNDMIYRGIINLLMMCGCIGQSGGGWAHYVGQEKLRPQFGWAPLAFGLDW 599 Query: 599 VRPPRQMNSTSFFYAHTSQWRHEKLGLDEIVAPTADHDKLAAMSMIDMNAKSERMGWLPS 658 RPPRQMN TSFFY+HTSQWRHEKL +DEI++PTAD + +S++D+NA+SERMGWLPS Sbjct: 600 SRPPRQMNGTSFFYSHTSQWRHEKLSVDEILSPTADRTRYDGLSLLDLNARSERMGWLPS 659 Query: 659 APQLETNPLDVCDAAQAAGQSPQDYLKAALKSGTVNMSCDDPDNPKNFPRNMFVWRSNIL 718 APQL NPLDV DAAQAAGQ P Y LK+G + +C+DPD+P NFPRNMFVWRSNIL Sbjct: 660 APQLNANPLDVTDAAQAAGQEPVAYTVEQLKAGKLRFACEDPDHPDNFPRNMFVWRSNIL 719 Query: 719 GSSGKGHEYFLKYLLGTQNALFDDAAEAIRPSEVKYREQAAEGKLDLLVTLDFRMSTTCL 778 GSSGKGHEYFLKYLLGTQNALF D + AI+P+EV+ RE AAEGKLDLL LDFRMSTTCL Sbjct: 720 GSSGKGHEYFLKYLLGTQNALFSDESAAIKPAEVEVRE-AAEGKLDLLTVLDFRMSTTCL 778 Query: 779 YADIVLPTATWYEKDDLNTSDMHPFIHPLSEAVQPLWDSKTDWEIYKGLAKKFSEIGGEH 838 Y DIVLPTATWYEKDDLNTSDMHPFIHPLSEAVQPLW+SKTDWEIYK +AKKF+EI G Sbjct: 779 YGDIVLPTATWYEKDDLNTSDMHPFIHPLSEAVQPLWESKTDWEIYKTIAKKFTEIAGPL 838 Query: 839 LGTRSDIVLQPLMHDTPAELGQPFEPKDWKKGECDLIPGKTAPNFVVVERNYRDIYKKFT 898 LGTR D+V PLMHDTP ELGQPF P+DWK GECDLIPGKTAP VVERNY DIY+KFT Sbjct: 839 LGTRRDLVCTPLMHDTPGELGQPFAPRDWKHGECDLIPGKTAPAMTVVERNYADIYRKFT 898 Query: 899 SVGPLLDKLGNGGKGINWNTEHEVGELAGLNKRVTEAGVSQGRPRLDTAIDACEMILTFA 958 SVGPLLDKLGNGGKGINW+TEHEV ELAGL +VT GVSQGRPRL+TA DA EMILTFA Sbjct: 899 SVGPLLDKLGNGGKGINWDTEHEVHELAGLTHKVTTPGVSQGRPRLETATDAAEMILTFA 958 Query: 959 PETNGHVSVKAWEALGKITGRDHTHLAVGREHDKIRLRDVQAQPRKIISAPTWSGLESEE 1018 PETNGHV+VKAW+AL KITGRDHTHLAVGREHDKIR RDVQAQPRKIISAPTWSGLESEE Sbjct: 959 PETNGHVAVKAWDALSKITGRDHTHLAVGREHDKIRFRDVQAQPRKIISAPTWSGLESEE 1018 Query: 1019 VSYNAGYTNVHEYIPWRTLTGRQQFYQDHRWMLDFGEGLCVYKPAIDTKTVAPMLNRHPN 1078 VSYNAGYTNVHE IPWRTLTGRQQFYQDHRWMLDFGEG+C+YKP IDTKTV PML +H N Sbjct: 1019 VSYNAGYTNVHELIPWRTLTGRQQFYQDHRWMLDFGEGVCLYKPPIDTKTVQPMLGKHSN 1078 Query: 1079 GEKEIVLNFLTPHQKWGIHSTYSDNLRMLTLSRGGPHVWISEDDARRAGLVDNDWVEVFN 1138 G E+VLN++TPHQKWGIHSTYSDNLRMLTLSRGGPHVW+SE +A+ AGL DNDWVEVFN Sbjct: 1079 GNPELVLNWITPHQKWGIHSTYSDNLRMLTLSRGGPHVWVSEPEAKAAGLRDNDWVEVFN 1138 Query: 1139 SNGTLTARVVVSQRIPGGMCLMYHAQEKIVNTPGAQLSGQRGGIHNSVTRAVLKPTHMIG 1198 NGTLTAR+VVSQR+P GMCLMYHAQEKIVN PGA+ SG RGGIHNSVTR V KPTHMIG Sbjct: 1139 VNGTLTARLVVSQRVPRGMCLMYHAQEKIVNVPGAETSGMRGGIHNSVTRTVTKPTHMIG 1198 Query: 1199 GYAQLSYGFNYYGTVGSNRDEFIVLRKMNKVDWLQGSLEE 1238 GYAQL+YGFNYYGTVGSNRDEF+++RKM ++DW++ L E Sbjct: 1199 GYAQLAYGFNYYGTVGSNRDEFVIVRKMQRIDWMEEQLAE 1238 >PA3875 [C] COG5013 Nitrate reductase alpha subunit Pae Pseudomonas aeruginosa Length = 1261 Score = 1751 bits (4536), Expect = 0.0, Method: Compositional matrix adjust. Identities = 827/1249 (66%), Positives = 980/1249 (78%), Gaps = 26/1249 (2%) Query: 1 MSHFLDRLKFMSRVKSTFANGHGAVVNEDRQWENAYRSRWQHDKVVRSTHGVNCTGSCSW 60 MSH LDRL+F + + FA+GHG NE R WE AYR RWQHDK+VRSTHGVNCTGSCSW Sbjct: 1 MSHLLDRLQFFKKKQGEFADGHGETSNESRAWEGAYRQRWQHDKIVRSTHGVNCTGSCSW 60 Query: 61 KVYVKNGLITWETQQTDYPRTRPDLPNXGPRGCPRGASYSWYVYSAQRVKYPMIRGRLMK 120 K+YVKNGLITWETQQTDYPRTRPDLPN PRGCPRGASYSWY+YSA R+KYP +R L+K Sbjct: 61 KIYVKNGLITWETQQTDYPRTRPDLPNHEPRGCPRGASYSWYIYSANRLKYPKVRKPLLK 120 Query: 121 LWQEARKTM-EPVQAWAAITGDAAKAQHYKSVRGLGGFVRTDWDTANEIIAAANAHTIKE 179 LW+EAR +PV AWA+I DAAKA+ YKS RGLGGFVR+ WD EIIAAAN +T K Sbjct: 121 LWREARAQHGDPVNAWASIVEDAAKAKSYKSQRGLGGFVRSSWDEVTEIIAAANVYTAKT 180 Query: 180 YGPDRVVGFSPIPAMSMVSYAAGARYLSLIGGVPLSFYDWYCDLPPASPQVWGEQTDVPE 239 YGPDRV+GFSPIPAMSMVSYAAGARYLSLIGGV LSFYDWYCDLPPASPQ+WGEQTDVPE Sbjct: 181 YGPDRVIGFSPIPAMSMVSYAAGARYLSLIGGVCLSFYDWYCDLPPASPQIWGEQTDVPE 240 Query: 240 SADWYNAGYLMVWGSNVPLTRTPDAHFYTEVRYKGTKTVAVSSDFGEMVKFGDIWLAPRQ 299 SADWYN+ Y++ WGSNVP TRTPDAHF+TEVRYKGTKTV+++ D+ E+ K D+WL P+Q Sbjct: 241 SADWYNSSYIIAWGSNVPQTRTPDAHFFTEVRYKGTKTVSITPDYSEVAKLTDLWLNPKQ 300 Query: 300 GTDAALAMAMGHVVLKEFHLERPSPYFRSYVKQYTDLPMLVRLVER-DGRYLPEHLLRAS 358 GTDAAL MA GHV+LKEFHL+RPS YF Y +QYTD+PMLV L E G + P LRA+ Sbjct: 301 GTDAALGMAFGHVILKEFHLDRPSAYFVDYCRQYTDMPMLVLLEEHAGGAFKPTRYLRAA 360 Query: 359 QLPGQLEEANNADWKTLAIDAATGEIVAPNGSIGYRWGEGQVNDGAKVGRWNLESRDGHS 418 L L + NN +WKT+A D +G +V+P G+IGYRWGE G+WN+ DG S Sbjct: 361 DLADNLGQDNNPEWKTIAYDERSGGLVSPTGAIGYRWGES--------GKWNIAELDGRS 412 Query: 419 GREIDPLLSLVEAHDEVVAVSFNYFGGDD--------AEQLLERRVPVRHVRLANGSTAR 470 G + LSL++ + V+F YF G + +++L RRVP R + A+G R Sbjct: 413 GDQTRLQLSLLDGPEHACEVAFPYFAGQEHPHFKGVANDEVLLRRVPFREIVAADGKRLR 472 Query: 471 VATVHDLMMANYGVDQGLGGD-VPHSYDD-DLPYTPAWQEKHTGVKRELVIQVAREFAQN 528 VATV+DL MANY +D+GLGGD V SY+D D PYTPAWQE+ TGV QVAREFA + Sbjct: 473 VATVYDLQMANYSIDRGLGGDNVATSYEDADTPYTPAWQERITGVPAARATQVAREFADS 532 Query: 529 AHDTEGRSMVILGAALNHWYHNDMIYRGIINLLMMCGCIGKSGGGWAHYVGQEKLRPQFG 588 A T G++MVI+GAA+NHWYH DM YR +IN+LMMCGCIG+SGGGWAHYVGQEKLRPQ G Sbjct: 533 ADKTRGKAMVIIGAAMNHWYHMDMNYRAVINMLMMCGCIGQSGGGWAHYVGQEKLRPQTG 592 Query: 589 WAPLAFATDWVRPPRQMNSTSFFYAHTSQWRHEKLGLDEIVAPTADHDKLAAMSMIDMNA 648 WAPLAF DW RPPRQMN TSFFY H+SQWRHEKL + E+++P AD + A ++ D N Sbjct: 593 WAPLAFGLDWSRPPRQMNGTSFFYLHSSQWRHEKLSMHEVLSPLADASRFAEHAL-DYNI 651 Query: 649 KSERMGWLPSAPQLETNPLDVCDAAQAAGQSPQDYLKAALKSGTVNMSCDDPDNPKNFPR 708 ++ER+GWLPSAPQL NPL + A+AAG DY+ LKSG + + + PD+P+NFPR Sbjct: 652 QAERLGWLPSAPQLNRNPLRIAAEAEAAGLPVADYVVRELKSGGLRFASESPDDPQNFPR 711 Query: 709 NMFVWRSNILGSSGKGHEYFLKYLLGTQNALFDD---AAEAIRPSEVKYREQAAEGKLDL 765 NMF+WRSN+LGSSGKGHEY LKYLLG +N + +D A RP+EV + + AEGKLDL Sbjct: 712 NMFIWRSNLLGSSGKGHEYMLKYLLGAKNGVMNDDLGKAGGPRPTEVDWVDDGAEGKLDL 771 Query: 766 LVTLDFRMSTTCLYADIVLPTATWYEKDDLNTSDMHPFIHPLSEAVQPLWDSKTDWEIYK 825 + TLDFRMS+TC+Y+DIVLPTATWYEKDDLNTSDMHPFIHPLS A P W++K+DWEIYK Sbjct: 772 VTTLDFRMSSTCMYSDIVLPTATWYEKDDLNTSDMHPFIHPLSAATDPAWEAKSDWEIYK 831 Query: 826 GLAKKFSEIGGEHLGTRSDIVLQPLMHDTPAELGQPF--EPKDWKKGECDLIPGKTAPNF 883 +AKKFS + HLG D+V PL+HDTP EL QPF + DWKKGEC+ +PG+ P Sbjct: 832 AIAKKFSAVAEGHLGVEQDLVTVPLLHDTPTELAQPFGGDGHDWKKGECEPVPGRNLPTL 891 Query: 884 VVVERNYRDIYKKFTSVGPLLDKLGNGGKGINWNTEHEVGELAGLNKRVTEAGVSQGRPR 943 +VER+Y ++Y+KFTS+GPLLDKLGNGGKGI WNTE EV + LN RV E+GVSQGRPR Sbjct: 892 HLVERDYPNVYRKFTSLGPLLDKLGNGGKGIGWNTEKEVKLVGDLNHRVVESGVSQGRPR 951 Query: 944 LDTAIDACEMILTFAPETNGHVSVKAWEALGKITGRDHTHLAVGREHDKIRLRDVQAQPR 1003 +D+AIDA E++L APETNG V+VKAWEAL KITGR+H HLA+ +E +KIR RD+Q QPR Sbjct: 952 IDSAIDAAEVVLALAPETNGQVAVKAWEALSKITGREHAHLALPKEDEKIRFRDIQVQPR 1011 Query: 1004 KIISAPTWSGLESEEVSYNAGYTNVHEYIPWRTLTGRQQFYQDHRWMLDFGEGLCVYKPA 1063 KIIS+PTWSGLE E VSYNAGYTNVHE IPWRT+TGRQQFYQDH WM FGEG Y+P Sbjct: 1012 KIISSPTWSGLEDEHVSYNAGYTNVHELIPWRTITGRQQFYQDHPWMQAFGEGFVSYRPP 1071 Query: 1064 IDTKTVAPMLNRHPNGEKEIVLNFLTPHQKWGIHSTYSDNLRMLTLSRGGPHVWISEDDA 1123 ++T+T +LNR PNG EI LN++TPHQKWGIHSTYSDNL MLTLSRGGP +W+SE DA Sbjct: 1072 VNTRTTEKLLNRKPNGNPEITLNWITPHQKWGIHSTYSDNLLMLTLSRGGPIIWLSEHDA 1131 Query: 1124 RRAGLVDNDWVEVFNSNGTLTARVVVSQRIPGGMCLMYHAQEKIVNTPGAQLSGQRGGIH 1183 +AG+VDNDWVEVFN+NG T R VVSQR+ GM +MYHAQE+IVN PG++ +G RGG H Sbjct: 1132 AKAGIVDNDWVEVFNANGAATCRAVVSQRVKDGMVMMYHAQERIVNVPGSETTGTRGGHH 1191 Query: 1184 NSVTRAVLKPTHMIGGYAQLSYGFNYYGTVGSNRDEFIVLRKMNKVDWL 1232 NSVTR VLKPTHMIGGYAQ ++GFNYYGTVG NRDEF+V+RKM+KVDWL Sbjct: 1192 NSVTRVVLKPTHMIGGYAQQAWGFNYYGTVGCNRDEFVVVRKMSKVDWL 1240 >narG [C] COG5013 Nitrate reductase alpha subunit Eco Escherichia coli K12 Length = 1247 Score = 1744 bits (4517), Expect = 0.0, Method: Compositional matrix adjust. Identities = 812/1247 (65%), Positives = 990/1247 (79%), Gaps = 24/1247 (1%) Query: 1 MSHFLDRLKFMSRVKSTFANGHGAVVNEDRQWENAYRSRWQHDKVVRSTHGVNCTGSCSW 60 MS FLDR ++ + TFA+GHG ++N +R WE+ YR RWQHDK+VRSTHGVNCTGSCSW Sbjct: 1 MSKFLDRFRYFKQKGETFADGHGQLLNTNRDWEDGYRQRWQHDKIVRSTHGVNCTGSCSW 60 Query: 61 KVYVKNGLITWETQQTDYPRTRPDLPNXGPRGCPRGASYSWYVYSAQRVKYPMIRGRLMK 120 K+YVKNGL+TWETQQTDYPRTRPDLPN PRGCPRGASYSWY+YSA R+KYPM+R RLMK Sbjct: 61 KIYVKNGLVTWETQQTDYPRTRPDLPNHEPRGCPRGASYSWYLYSANRLKYPMMRKRLMK 120 Query: 121 LWQEARKT-MEPVQAWAAITGDAAKAQHYKSVRGLGGFVRTDWDTANEIIAAANAHTIKE 179 +W+EA+ +PV+AWA+I DA KA+ +K RG GGFVR+ W NE+IAA+N +TIK Sbjct: 121 MWREAKALHSDPVEAWASIIEDADKAKSFKQARGRGGFVRSSWQEVNELIAASNVYTIKN 180 Query: 180 YGPDRVVGFSPIPAMSMVSYAAGARYLSLIGGVPLSFYDWYCDLPPASPQVWGEQTDVPE 239 YGPDRV GFSPIPAMSMVSYA+GARYLSLIGG LSFYDWYCDLPPASPQ WGEQTDVPE Sbjct: 181 YGPDRVAGFSPIPAMSMVSYASGARYLSLIGGTCLSFYDWYCDLPPASPQTWGEQTDVPE 240 Query: 240 SADWYNAGYLMVWGSNVPLTRTPDAHFYTEVRYKGTKTVAVSSDFGEMVKFGDIWLAPRQ 299 SADWYN+ Y++ WGSNVP TRTPDAHF+TEVRYKGTKTVAV+ D+ E+ K D+WLAP+Q Sbjct: 241 SADWYNSSYIIAWGSNVPQTRTPDAHFFTEVRYKGTKTVAVTPDYAEIAKLCDLWLAPKQ 300 Query: 300 GTDAALAMAMGHVVLKEFHLERPSPYFRSYVKQYTDLPMLVRLVERDGRYLPEHLLRASQ 359 GTDAA+A+AMGHV+L+EFHL+ PS YF YV++YTD+PMLV L ERDG Y +LRA+ Sbjct: 301 GTDAAMALAMGHVMLREFHLDNPSQYFTDYVRRYTDMPMLVMLEERDGYYAAGRMLRAAD 360 Query: 360 LPGQLEEANNADWKTLAIDAATGEIVAPNGSIGYRWGEGQVNDGAKVGRWNLESRDGHSG 419 L L + NN +WKT+A + GE+VAPNGSIG+RWGE G+WNLE RDG +G Sbjct: 361 LVDALGQENNPEWKTVAFNT-NGEMVAPNGSIGFRWGEK--------GKWNLEQRDGKTG 411 Query: 420 REIDPLLSLVEAHDEVVAVSFNYFGGD--------DAEQLLERRVPVRHVRLANGSTARV 471 E + LSL+ + DE+ V F YFGGD + E +L ++PV+ ++LA+GSTA V Sbjct: 412 EETELQLSLLGSQDEIAEVGFPYFGGDGTEHFNKVELENVLLHKLPVKRLQLADGSTALV 471 Query: 472 ATVHDLMMANYGVDQGLGG-DVPHSYDDDLPYTPAWQEKHTGVKRELVIQVAREFAQNAH 530 TV+DL +ANYG+++GL + SYDD YTPAW E+ TGV R +I++AREFA NA Sbjct: 472 TTVYDLTLANYGLERGLNDVNCATSYDDVKAYTPAWAEQITGVSRSQIIRIAREFADNAD 531 Query: 531 DTEGRSMVILGAALNHWYHNDMIYRGIINLLMMCGCIGKSGGGWAHYVGQEKLRPQFGWA 590 T GRSM+I+GA LNHWYH DM YRG+IN+L+ CGC+G+SGGGWAHYVGQEKLRPQ GW Sbjct: 532 KTHGRSMIIVGAGLNHWYHLDMNYRGLINMLIFCGCVGQSGGGWAHYVGQEKLRPQTGWQ 591 Query: 591 PLAFATDWVRPPRQMNSTSFFYAHTSQWRHEKLGLDEIVAPTADHDKLAAMSMIDMNAKS 650 PLAFA DW RP R MNSTS+FY H+SQWR+E + +E+++P AD + +ID N ++ Sbjct: 592 PLAFALDWQRPARHMNSTSYFYNHSSQWRYETVTAEELLSPMADKSRYTG-HLIDFNVRA 650 Query: 651 ERMGWLPSAPQLETNPLDVCDAAQAAGQSPQDYLKAALKSGTVNMSCDDPDNPKNFPRNM 710 ERMGWLPSAPQL TNPL + A+ AG +P DY +LK G++ + + P+N KN PRN+ Sbjct: 651 ERMGWLPSAPQLGTNPLTIAGEAEKAGMNPVDYTVKSLKEGSIRFAAEQPENGKNHPRNL 710 Query: 711 FVWRSNILGSSGKGHEYFLKYLLGTQNALF-DDAAE--AIRPSEVKYREQAAEGKLDLLV 767 F+WRSN+LGSSGKGHE+ LKYLLGT++ + D + ++P EV +++ EGKLDL+V Sbjct: 711 FIWRSNLLGSSGKGHEFMLKYLLGTEHGIQGKDLGQQGGVKPEEVDWQDNGLEGKLDLVV 770 Query: 768 TLDFRMSTTCLYADIVLPTATWYEKDDLNTSDMHPFIHPLSEAVQPLWDSKTDWEIYKGL 827 TLDFR+S+TCLY+DI+LPTATWYEKDD+NTSDMHPFIHPLS AV P W++K+DWEIYK + Sbjct: 771 TLDFRLSSTCLYSDIILPTATWYEKDDMNTSDMHPFIHPLSAAVDPAWEAKSDWEIYKAI 830 Query: 828 AKKFSEIGGEHLGTRSDIVLQPLMHDTPAELGQPFEPKDWKKGECDLIPGKTAPNFVVVE 887 AKKFSE+ HLG +DIV P+ HD+ AEL QP + KDWKKGECDLIPGKTAP+ +VVE Sbjct: 831 AKKFSEVCVGHLGKETDIVTLPIQHDSAAELAQPLDVKDWKKGECDLIPGKTAPHIMVVE 890 Query: 888 RNYRDIYKKFTSVGPLLDKLGNGGKGINWNTEHEVGELAGLNKRVTEAGVSQGRPRLDTA 947 R+Y Y++FTS+GPL++K+GNGGKGI WNT+ E+ L LN E G ++G+P L+TA Sbjct: 891 RDYPATYERFTSIGPLMEKIGNGGKGIAWNTQSEMDLLRKLNYTKAE-GPAKGQPMLNTA 949 Query: 948 IDACEMILTFAPETNGHVSVKAWEALGKITGRDHTHLAVGREHDKIRLRDVQAQPRKIIS 1007 IDA EMILT APETNG V+VKAW AL + TGRDHTHLA+ +E +KIR RD+QAQPRKIIS Sbjct: 950 IDAAEMILTLAPETNGQVAVKAWAALSEFTGRDHTHLALNKEDEKIRFRDIQAQPRKIIS 1009 Query: 1008 APTWSGLESEEVSYNAGYTNVHEYIPWRTLTGRQQFYQDHRWMLDFGEGLCVYKPAIDTK 1067 +PTWSGLE E VSYNAGYTNVHE IPWRTL+GRQQ YQDH+WM DFGE L VY+P IDT+ Sbjct: 1010 SPTWSGLEDEHVSYNAGYTNVHELIPWRTLSGRQQLYQDHQWMRDFGESLLVYRPPIDTR 1069 Query: 1068 TVAPMLNRHPNGEKEIVLNFLTPHQKWGIHSTYSDNLRMLTLSRGGPHVWISEDDARRAG 1127 +V ++ + NG +E LNFLTPHQKWGIHSTYSDNL MLTL RGGP VW+SE DA+ G Sbjct: 1070 SVKEVIGQKSNGNQEKALNFLTPHQKWGIHSTYSDNLLMLTLGRGGPVVWLSEADAKDLG 1129 Query: 1128 LVDNDWVEVFNSNGTLTARVVVSQRIPGGMCLMYHAQEKIVNTPGAQLSGQRGGIHNSVT 1187 + DNDW+EVFNSNG LTAR VVSQR+P GM +MYHAQE+IVN PG++++ QRGGIHNSVT Sbjct: 1130 IADNDWIEVFNSNGALTARAVVSQRVPAGMTMMYHAQERIVNLPGSEITQQRGGIHNSVT 1189 Query: 1188 RAVLKPTHMIGGYAQLSYGFNYYGTVGSNRDEFIVLRKMNKVDWLQG 1234 R KPTHMIGGYA L+YGFNYYGTVGSNRDEF+V+RKM +DWL G Sbjct: 1190 RITPKPTHMIGGYAHLAYGFNYYGTVGSNRDEFVVVRKMKNIDWLDG 1236 >STM1764 [C] COG5013 Nitrate reductase alpha subunit Sty Salmonella typhimurium LT2 Length = 1247 Score = 1743 bits (4513), Expect = 0.0, Method: Compositional matrix adjust. Identities = 810/1247 (64%), Positives = 992/1247 (79%), Gaps = 24/1247 (1%) Query: 1 MSHFLDRLKFMSRVKSTFANGHGAVVNEDRQWENAYRSRWQHDKVVRSTHGVNCTGSCSW 60 MS FLDR ++ + TFA+GHG ++ +R WE+ YR RWQHDK+VRSTHGVNCTGSCSW Sbjct: 1 MSKFLDRFRYFKQKGETFADGHGQLLETNRDWEDGYRQRWQHDKIVRSTHGVNCTGSCSW 60 Query: 61 KVYVKNGLITWETQQTDYPRTRPDLPNXGPRGCPRGASYSWYVYSAQRVKYPMIRGRLMK 120 K+YVKNGL+TWETQQTDYPRTRPD+PN PRGCPRGASYSWY+YSA R+KYP++R RLMK Sbjct: 61 KIYVKNGLVTWETQQTDYPRTRPDMPNHEPRGCPRGASYSWYLYSANRLKYPLMRKRLMK 120 Query: 121 LWQEARKT-MEPVQAWAAITGDAAKAQHYKSVRGLGGFVRTDWDTANEIIAAANAHTIKE 179 +W+EA+K +PV+AWA+I DA KA+ +K RG GGFVR+ W NE+IAA+N +T+K Sbjct: 121 MWREAKKLHRDPVEAWASIIEDADKAKSFKQARGRGGFVRSSWQEVNELIAASNVYTVKT 180 Query: 180 YGPDRVVGFSPIPAMSMVSYAAGARYLSLIGGVPLSFYDWYCDLPPASPQVWGEQTDVPE 239 YGPDRV GFSPIPAMSMVSYA+GARYLSLIGG LSFYDWYCDLPPASPQ WGEQTDVPE Sbjct: 181 YGPDRVAGFSPIPAMSMVSYASGARYLSLIGGTCLSFYDWYCDLPPASPQTWGEQTDVPE 240 Query: 240 SADWYNAGYLMVWGSNVPLTRTPDAHFYTEVRYKGTKTVAVSSDFGEMVKFGDIWLAPRQ 299 SADWYN+ Y++ WGSNVP TRTPDAHF+TEVRYKGTKTVAV+ D+ E+ K D+WLAP+Q Sbjct: 241 SADWYNSSYIIAWGSNVPQTRTPDAHFFTEVRYKGTKTVAVTPDYAEIAKLCDLWLAPKQ 300 Query: 300 GTDAALAMAMGHVVLKEFHLERPSPYFRSYVKQYTDLPMLVRLVERDGRYLPEHLLRASQ 359 GTDAA+A+AMGHV+L+EFHL+ P YF YV++YTD+PMLV L ERDG Y +LRA+ Sbjct: 301 GTDAAMALAMGHVMLREFHLDNPRQYFTDYVRRYTDMPMLVMLEERDGYYAAGRMLRAAD 360 Query: 360 LPGQLEEANNADWKTLAIDAATGEIVAPNGSIGYRWGEGQVNDGAKVGRWNLESRDGHSG 419 L L + NN +WKT+AI++ GE+VAPNGSIG+RWGE G+WNLE RDG +G Sbjct: 361 LVDSLGQENNPEWKTVAINS-NGEMVAPNGSIGFRWGEK--------GKWNLEQRDGTTG 411 Query: 420 REIDPLLSLVEAHDEVVAVSFNYFGGDDAE--------QLLERRVPVRHVRLANGSTARV 471 E + LSL+ + DE+ V F YFGG+ +E +L ++P + ++LA+GS+A V Sbjct: 412 AETELQLSLLGSQDEIADVGFPYFGGEGSEYFNHVALDNVLLHKLPAKRLQLADGSSALV 471 Query: 472 ATVHDLMMANYGVDQGLGGD-VPHSYDDDLPYTPAWQEKHTGVKRELVIQVAREFAQNAH 530 TV+DL MANYG+++GL + SYDD YTPAW E+ TGV R +I++AREFA NA Sbjct: 472 TTVYDLTMANYGLERGLNDENCAASYDDTKAYTPAWAEQITGVPRAQIIRIAREFADNAD 531 Query: 531 DTEGRSMVILGAALNHWYHNDMIYRGIINLLMMCGCIGKSGGGWAHYVGQEKLRPQFGWA 590 T GRSM+I+GA LNHWYH DM YRG+IN+L+ CGC+G+SGGGWAHYVGQEKLRPQ GW Sbjct: 532 KTHGRSMIIVGAGLNHWYHLDMNYRGLINMLVFCGCVGQSGGGWAHYVGQEKLRPQTGWQ 591 Query: 591 PLAFATDWVRPPRQMNSTSFFYAHTSQWRHEKLGLDEIVAPTADHDKLAAMSMIDMNAKS 650 PLAFA DW RP R MNSTS+FY H+SQWR+E + +E+++P AD + + +ID N ++ Sbjct: 592 PLAFALDWQRPARHMNSTSYFYNHSSQWRYETVTAEELLSPMADKSRYSG-HLIDFNVRA 650 Query: 651 ERMGWLPSAPQLETNPLDVCDAAQAAGQSPQDYLKAALKSGTVNMSCDDPDNPKNFPRNM 710 ERMGWLPSAPQL TNPL + A+ AG +P DY +LK G++ + + P+N KN PRN+ Sbjct: 651 ERMGWLPSAPQLGTNPLYIAREAEKAGMTPVDYTVKSLKEGSIRFAAEQPENGKNHPRNL 710 Query: 711 FVWRSNILGSSGKGHEYFLKYLLGTQNAL--FDDAAEA-IRPSEVKYREQAAEGKLDLLV 767 F+WRSN+LGSSGKGHEY LKYLLGT++ + D + ++P EV++R+ +GKLDL+V Sbjct: 711 FIWRSNLLGSSGKGHEYMLKYLLGTEHGIQGLDLGKQGGVKPEEVEWRDNGLDGKLDLVV 770 Query: 768 TLDFRMSTTCLYADIVLPTATWYEKDDLNTSDMHPFIHPLSEAVQPLWDSKTDWEIYKGL 827 TLDFR+S+TCLY+DIVLPTATWYEKDD+NTSDMHPFIHPLS AV P W+SK+DWEIYKG+ Sbjct: 771 TLDFRLSSTCLYSDIVLPTATWYEKDDMNTSDMHPFIHPLSAAVDPAWESKSDWEIYKGI 830 Query: 828 AKKFSEIGGEHLGTRSDIVLQPLMHDTPAELGQPFEPKDWKKGECDLIPGKTAPNFVVVE 887 AKKFSE+ HLG +D+V P+ HD+ AEL QP + KDWKKGECDLIPGKTAP+ + VE Sbjct: 831 AKKFSEVCVGHLGKETDVVTLPIQHDSAAELAQPLDVKDWKKGECDLIPGKTAPHIMTVE 890 Query: 888 RNYRDIYKKFTSVGPLLDKLGNGGKGINWNTEHEVGELAGLNKRVTEAGVSQGRPRLDTA 947 R+Y Y++FTS+GPL++K+GNGGKGI WNT+ E+ L LN + G ++G+P L+TA Sbjct: 891 RDYPATYERFTSIGPLMEKIGNGGKGIAWNTQSEMDLLRKLNYTKAD-GPAKGQPMLNTA 949 Query: 948 IDACEMILTFAPETNGHVSVKAWEALGKITGRDHTHLAVGREHDKIRLRDVQAQPRKIIS 1007 IDA EMILT APETNG V+VKAW AL + TGRDHTHLA +E +KIR RD+QAQPRKIIS Sbjct: 950 IDAAEMILTLAPETNGQVAVKAWAALSEFTGRDHTHLATNKEEEKIRFRDIQAQPRKIIS 1009 Query: 1008 APTWSGLESEEVSYNAGYTNVHEYIPWRTLTGRQQFYQDHRWMLDFGEGLCVYKPAIDTK 1067 +PTWSGLE E VSYNAGYTNVHE IPWRTL+GRQQ YQDH+WM DFGE L VY+P IDT+ Sbjct: 1010 SPTWSGLEDEHVSYNAGYTNVHELIPWRTLSGRQQLYQDHQWMRDFGESLLVYRPPIDTR 1069 Query: 1068 TVAPMLNRHPNGEKEIVLNFLTPHQKWGIHSTYSDNLRMLTLSRGGPHVWISEDDARRAG 1127 +V ++ R NG E LNFLTPHQKWGIHSTYSDNL MLTLSRGGP VW+SE DA+ G Sbjct: 1070 SVKAVMGRKSNGNPEKALNFLTPHQKWGIHSTYSDNLLMLTLSRGGPIVWMSETDAKDLG 1129 Query: 1128 LVDNDWVEVFNSNGTLTARVVVSQRIPGGMCLMYHAQEKIVNTPGAQLSGQRGGIHNSVT 1187 + DNDW+EVFNSNG LTAR VVSQR+P GM +MYHAQE+IVN PG++++ QRGGIHNSVT Sbjct: 1130 IEDNDWIEVFNSNGALTARAVVSQRVPAGMTMMYHAQERIVNLPGSEITQQRGGIHNSVT 1189 Query: 1188 RAVLKPTHMIGGYAQLSYGFNYYGTVGSNRDEFIVLRKMNKVDWLQG 1234 R KPTHMIGGYAQL+YGFNYYGTVGSNRDEF+V+RKM ++WL G Sbjct: 1190 RITPKPTHMIGGYAQLAYGFNYYGTVGSNRDEFVVVRKMKNINWLDG 1236 >ZnarG [C] COG5013 Nitrate reductase alpha subunit EcZ Escherichia coli O157:H7 EDL933 Length = 1247 Score = 1741 bits (4510), Expect = 0.0, Method: Compositional matrix adjust. Identities = 812/1247 (65%), Positives = 989/1247 (79%), Gaps = 24/1247 (1%) Query: 1 MSHFLDRLKFMSRVKSTFANGHGAVVNEDRQWENAYRSRWQHDKVVRSTHGVNCTGSCSW 60 MS FLDR ++ + TFA+GHG ++N +R WE+ YR RWQHDK+VRSTHGVNCTGSCSW Sbjct: 1 MSKFLDRFRYFKQKGETFADGHGQLLNTNRDWEDGYRQRWQHDKIVRSTHGVNCTGSCSW 60 Query: 61 KVYVKNGLITWETQQTDYPRTRPDLPNXGPRGCPRGASYSWYVYSAQRVKYPMIRGRLMK 120 K+YVKNGL+TWETQQTDYPRTRPDLPN PRGCPRGASYSWY+YSA R+KYPM+R RLMK Sbjct: 61 KIYVKNGLVTWETQQTDYPRTRPDLPNHEPRGCPRGASYSWYLYSANRLKYPMMRKRLMK 120 Query: 121 LWQEARKT-MEPVQAWAAITGDAAKAQHYKSVRGLGGFVRTDWDTANEIIAAANAHTIKE 179 +W+EA+ +PV+AWA+I DA KA+ +K RG GGFVR+ W NE+IAA+N +TIK Sbjct: 121 MWREAKALHSDPVEAWASIIEDADKAKSFKQARGRGGFVRSSWQEVNELIAASNVYTIKN 180 Query: 180 YGPDRVVGFSPIPAMSMVSYAAGARYLSLIGGVPLSFYDWYCDLPPASPQVWGEQTDVPE 239 YGPDRV GFSPIPAMSMVSYA+GARYLSLIGG LSFYDWYCDLPPASPQ WGEQTDVPE Sbjct: 181 YGPDRVAGFSPIPAMSMVSYASGARYLSLIGGTCLSFYDWYCDLPPASPQTWGEQTDVPE 240 Query: 240 SADWYNAGYLMVWGSNVPLTRTPDAHFYTEVRYKGTKTVAVSSDFGEMVKFGDIWLAPRQ 299 SADWYN+ Y++ WGSNVP TRTPDAHF+TEVRYKGTKTVAV+ D+ E+ K D+WLAP+Q Sbjct: 241 SADWYNSSYIIAWGSNVPQTRTPDAHFFTEVRYKGTKTVAVTPDYAEIAKLCDLWLAPKQ 300 Query: 300 GTDAALAMAMGHVVLKEFHLERPSPYFRSYVKQYTDLPMLVRLVERDGRYLPEHLLRASQ 359 GTDAA+A+AMGHV+L+EFHL+ PS YF YV++YTD+PMLV L ERDG Y +LRA+ Sbjct: 301 GTDAAMALAMGHVMLREFHLDNPSQYFTDYVRRYTDMPMLVMLEERDGYYAAGRMLRAAD 360 Query: 360 LPGQLEEANNADWKTLAIDAATGEIVAPNGSIGYRWGEGQVNDGAKVGRWNLESRDGHSG 419 L L + NN +WKT+A + GE+VAPNGSIG+RWGE G+WNLE RDG +G Sbjct: 361 LVDALGQENNPEWKTVAFNT-NGEMVAPNGSIGFRWGEK--------GKWNLEQRDGKTG 411 Query: 420 REIDPLLSLVEAHDEVVAVSFNYFGGD--------DAEQLLERRVPVRHVRLANGSTARV 471 E + LSL+ + DE+ V F YFGGD + E +L ++PV+ ++LA+GSTA V Sbjct: 412 EETELQLSLLGSQDEIAEVGFPYFGGDGTEHFNKVELENVLLHKLPVKRLQLADGSTALV 471 Query: 472 ATVHDLMMANYGVDQGLGG-DVPHSYDDDLPYTPAWQEKHTGVKRELVIQVAREFAQNAH 530 TV+DL +ANYG+++GL + SYDD YTPAW E+ TGV R +I++AREFA NA Sbjct: 472 TTVYDLTLANYGLERGLNDVNCATSYDDVKAYTPAWAEQITGVSRSQIIRIAREFADNAD 531 Query: 531 DTEGRSMVILGAALNHWYHNDMIYRGIINLLMMCGCIGKSGGGWAHYVGQEKLRPQFGWA 590 T GRSM+I+GA LNHWYH DM YRG+IN+L+ CGC+G+SGGGWAHYVGQEKLRPQ GW Sbjct: 532 KTHGRSMIIVGAGLNHWYHLDMNYRGLINMLIFCGCVGQSGGGWAHYVGQEKLRPQTGWQ 591 Query: 591 PLAFATDWVRPPRQMNSTSFFYAHTSQWRHEKLGLDEIVAPTADHDKLAAMSMIDMNAKS 650 PLAFA DW RP R MNSTS+FY H+SQWR+E + +E+++P AD + +ID N ++ Sbjct: 592 PLAFALDWQRPARHMNSTSYFYNHSSQWRYETVTAEELLSPMADKSRYTG-HLIDFNVRA 650 Query: 651 ERMGWLPSAPQLETNPLDVCDAAQAAGQSPQDYLKAALKSGTVNMSCDDPDNPKNFPRNM 710 ERMGWLPSAPQL TNPL + A+ AG +P DY +LK G++ + + P+N KN PRN+ Sbjct: 651 ERMGWLPSAPQLGTNPLTIAGEAEKAGMNPVDYTVKSLKEGSIRFAAEQPENGKNHPRNL 710 Query: 711 FVWRSNILGSSGKGHEYFLKYLLGTQNALF-DDAAE--AIRPSEVKYREQAAEGKLDLLV 767 F+WRSN+LGSSGKGHE+ LKYLLGT++ + D + ++P EV +++ EGKLDL+V Sbjct: 711 FIWRSNLLGSSGKGHEFMLKYLLGTEHGIQGKDLGQQGGVKPEEVDWQDNGLEGKLDLVV 770 Query: 768 TLDFRMSTTCLYADIVLPTATWYEKDDLNTSDMHPFIHPLSEAVQPLWDSKTDWEIYKGL 827 TLDFR+S+TCLY+DI+LPTATWYEKDD+NTSDMHPFIHPLS AV P W++K+DWEIYK + Sbjct: 771 TLDFRLSSTCLYSDIILPTATWYEKDDMNTSDMHPFIHPLSAAVDPAWEAKSDWEIYKAI 830 Query: 828 AKKFSEIGGEHLGTRSDIVLQPLMHDTPAELGQPFEPKDWKKGECDLIPGKTAPNFVVVE 887 AKKFSE+ HLG +DIV P+ HD+ AEL QP + KDWKKGECDLIPGKTAP+ +VVE Sbjct: 831 AKKFSEVCVGHLGKETDIVTLPIQHDSAAELAQPLDVKDWKKGECDLIPGKTAPHIMVVE 890 Query: 888 RNYRDIYKKFTSVGPLLDKLGNGGKGINWNTEHEVGELAGLNKRVTEAGVSQGRPRLDTA 947 R+Y Y++FTS+GPL++K+GNGGKGI WNT+ E+ L LN E G ++G+P L+TA Sbjct: 891 RDYPATYERFTSIGPLMEKIGNGGKGIAWNTQSEMDLLRKLNYTKAE-GPAKGQPMLNTA 949 Query: 948 IDACEMILTFAPETNGHVSVKAWEALGKITGRDHTHLAVGREHDKIRLRDVQAQPRKIIS 1007 IDA EMILT APETNG V+VKAW AL + TGRDHTHLA+ +E +KIR RD+QAQPRKIIS Sbjct: 950 IDAAEMILTLAPETNGQVAVKAWAALSEFTGRDHTHLALNKEDEKIRFRDIQAQPRKIIS 1009 Query: 1008 APTWSGLESEEVSYNAGYTNVHEYIPWRTLTGRQQFYQDHRWMLDFGEGLCVYKPAIDTK 1067 +PTWSGLE E VSYNAGYTNVHE IPWRTL+GRQQ YQDH+WM DFGE L VY+P IDT+ Sbjct: 1010 SPTWSGLEDEHVSYNAGYTNVHELIPWRTLSGRQQLYQDHQWMRDFGESLLVYRPPIDTR 1069 Query: 1068 TVAPMLNRHPNGEKEIVLNFLTPHQKWGIHSTYSDNLRMLTLSRGGPHVWISEDDARRAG 1127 +V ++ + NG E LNFLTPHQKWGIHSTYSDNL MLTL RGGP VW+SE DA+ G Sbjct: 1070 SVKEVIGQKSNGNPEKALNFLTPHQKWGIHSTYSDNLLMLTLGRGGPVVWLSEADAKDLG 1129 Query: 1128 LVDNDWVEVFNSNGTLTARVVVSQRIPGGMCLMYHAQEKIVNTPGAQLSGQRGGIHNSVT 1187 + DNDW+EVFNSNG LTAR VVSQR+P GM +MYHAQE+IVN PG++++ QRGGIHNSVT Sbjct: 1130 IADNDWIEVFNSNGALTARAVVSQRVPAGMTMMYHAQERIVNLPGSEITQQRGGIHNSVT 1189 Query: 1188 RAVLKPTHMIGGYAQLSYGFNYYGTVGSNRDEFIVLRKMNKVDWLQG 1234 R KPTHMIGGYA L+YGFNYYGTVGSNRDEF+V+RKM +DWL G Sbjct: 1190 RITPKPTHMIGGYAHLAYGFNYYGTVGSNRDEFVVVRKMKNIDWLDG 1236