BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0038.0137.p (269 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSp1417 [GEPR] COG0477 Permeases of the major facilitator superf... 114 2e-25 RSc2323 [GEPR] COG0477 Permeases of the major facilitator superf... 100 5e-21 Cgl1213 [GEPR] COG0477 Permeases of the major facilitator superf... 99 8e-21 MT2395 [GEPR] COG0477 Permeases of the major facilitator superfa... 96 1e-19 Rv2333c [GEPR] COG0477 Permeases of the major facilitator superf... 96 1e-19 >RSp1417 [GEPR] COG0477 Permeases of the major facilitator superfamily Rso Ralstonia solanacearum Length = 467 Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 72/213 (33%), Positives = 114/213 (53%), Gaps = 3/213 (1%) Query: 10 DQRERAWALWGGIMGLTMVLAPLIGGVVNTLLGWRWAFAVNLPACLLLAVAVWRHVPESR 69 ++R +A L+GGI GL ++L P++GGV+ L W+W F +N+P L L V R +P+S+ Sbjct: 132 ERRGKALGLFGGITGLALILGPVLGGVIAGNLPWQWIFWLNVPIGLPLIVLAVRRIPDSK 191 Query: 70 NPLPRPLDPLGILSSSSAVFLLTWALITGPEHGWTSVACVARGLGGALLLVLFIAWQRRA 129 P LD G L A L W L+ G GW+ + GA ++ F+ W+RRA Sbjct: 192 GP-AAALDIPGALLVMGASIGLVWGLMRGSSKGWSDSEAPLALVVGAAFMICFVLWERRA 250 Query: 130 AHPMLELSLFRHAGFVAAVAAMFAYAASAQVMASLLPLFLQNARGLSAWQTGLAMLPFAL 189 HPM+ + LF F + +AA F + A + LP F Q+A+G + GL +LP+ + Sbjct: 251 KHPMIPMRLFASRAFSSGIAACFLFYAGMYGVVFFLPQFFQSAQGHDPFAAGLRLLPWTV 310 Query: 190 AMLLL-PQVGSRLARWLSSPQMLALGLGVTALG 221 + + P GS + R + ++ GL + A+G Sbjct: 311 TLFFIAPLAGSMVDR-IGERSVMVTGLLLQAIG 342 >RSc2323 [GEPR] COG0477 Permeases of the major facilitator superfamily Rso Ralstonia solanacearum Length = 521 Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 73/227 (32%), Positives = 116/227 (51%), Gaps = 2/227 (0%) Query: 1 VIGHGFHDEDQRERAWALWGGIMGLTMVLAPLIGGVVNTLLGWRWAFAVN-LPACLLLAV 59 V+ H F + +R +A+ +WG + G+ + PLIGG++ + GW+W F V+ A L + Sbjct: 136 VLSHQFPEGAERGKAFGIWGIVFGIGLGFGPLIGGLIVAMSGWKWVFWVHVFIAALTFGL 195 Query: 60 AVWRHVPESRNPLPRPLDPLGILSSSSAVFLLTWALITGPEHGWTSVACVARGLGGALLL 119 A+ V ESR+P R LD GI++ S V L + + G + G+ S + + A+ Sbjct: 196 AI-VGVRESRDPHARRLDLAGIVTLSLTVLGLAYFVTQGADTGFGSASALRVIAATAVSF 254 Query: 120 VLFIAWQRRAAHPMLELSLFRHAGFVAAVAAMFAYAASAQVMASLLPLFLQNARGLSAWQ 179 LF+ + RAAHPM + S+FR F A+ S LP++ Q+A G A Sbjct: 255 ALFLIVEMRAAHPMFDFSVFRVRNFSGALLGSVGMNFSFWPFIIYLPIYFQSALGQGAAA 314 Query: 180 TGLAMLPFALAMLLLPQVGSRLARWLSSPQMLALGLGVTALGNLLMI 226 G+++L + L L+ P +G RLA ++ GL LG LM+ Sbjct: 315 AGVSLLAYTLPTLVFPPIGERLALRYRPGIVIPAGLFTIGLGFFLML 361 >Cgl1213 [GEPR] COG0477 Permeases of the major facilitator superfamily Cgl Corynebacterium glutamicum Length = 487 Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 79/230 (34%), Positives = 118/230 (51%), Gaps = 26/230 (11%) Query: 10 DQRERAWALWGGIMGLTMVLAPLIGGVVNTLLGWRWAFAVNLPACLLLAVAVWRHVPESR 69 ++R A +WG GL + P++GGV+ GW+W F +N+P ++ +AV ++VPE Sbjct: 155 ERRGAALGVWGSTAGLASLAGPILGGVITENWGWQWVFYINVPIGVISVIAVMKYVPE-F 213 Query: 70 NPLPRPLDPLGILSSSSAVFLLTWALITGPEHGWTS------VACVARGLGGALLLVLFI 123 PL RPLDPL I+ S AVF L +A G GW + VA A L FI Sbjct: 214 PPLTRPLDPLSIVLSIVAVFFLVFAFQEGEGAGWAAWVWIMIVAAFA-------LFAWFI 266 Query: 124 AWQRRAA----HPMLELSLFRHAGFVAAVAAMFAYAASAQVMASLLP--LFLQNARGLSA 177 Q RA P++ L +F+ F ++ + A V + LP L+ Q A G++A Sbjct: 267 YQQSRAEKSGNDPLVPLEIFKFRNF--SLGNICIMAMGFTVAGTPLPIMLYFQQAHGMNA 324 Query: 178 WQTGLAMLPFAL-AMLLLPQVGSRLARWLSSPQML-ALGLGVTALGNLLM 225 + G M+P AL A +L P VG + R S+P ++ ALG A+ +L+ Sbjct: 325 MEAGFMMVPQALMAAVLSPFVGKLVDR--SNPGLMAALGFSTVAVSIVLL 372 >MT2395 [GEPR] COG0477 Permeases of the major facilitator superfamily MtC Mycobacterium tuberculosis CDC1551 Length = 537 Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 69/203 (33%), Positives = 104/203 (51%), Gaps = 1/203 (0%) Query: 2 IGHGFHDEDQRERAWALWGGIMGLTMVLAPLIGGVVNTLLGWRWAFAVNLPACLLLAVAV 61 + F + ++ RA +W I + P +GG++ GWR F VNLP L+ Sbjct: 120 VSAAFPEAKEKARAIGIWTAIASIGTTTGPTLGGLLVDQWGWRSIFYVNLPMGALVLFLT 179 Query: 62 WRHVPESRNPLPRPLDPLGILSSSSAVFLLTWALITGPEHGWTSVACVARGLGGALLLVL 121 +V ES N R D G L AV L +A+I GP+ GWTSV + A+ L Sbjct: 180 LCYVEESCNERARRFDLSGQLLFIVAVGALVYAVIEGPQIGWTSVQTIVMLWTAAVGCAL 239 Query: 122 FIAWQRRAAHPMLELSLFRHAGFVAAVAAMFAYAASAQVMASLLPLFLQNARGLSAWQTG 181 F+ +RR+++PM++L+LFR + A+A + + M L FLQN RG + TG Sbjct: 240 FVWLERRSSNPMMDLTLFRDTSYALAIATICTVFFAVYGMLLLTTQFLQNVRGYTPSVTG 299 Query: 182 LAMLPFALAMLLL-PQVGSRLAR 203 L +LPF+ A+ ++ P VG + R Sbjct: 300 LMILPFSAAVAIVSPLVGHLVGR 322 >Rv2333c [GEPR] COG0477 Permeases of the major facilitator superfamily Mtu Mycobacterium tuberculosis H37Rv Length = 537 Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 69/203 (33%), Positives = 104/203 (51%), Gaps = 1/203 (0%) Query: 2 IGHGFHDEDQRERAWALWGGIMGLTMVLAPLIGGVVNTLLGWRWAFAVNLPACLLLAVAV 61 + F + ++ RA +W I + P +GG++ GWR F VNLP L+ Sbjct: 120 VSAAFPEAKEKARAIGIWTAIASIGTTTGPTLGGLLVDQWGWRSIFYVNLPMGALVLFLT 179 Query: 62 WRHVPESRNPLPRPLDPLGILSSSSAVFLLTWALITGPEHGWTSVACVARGLGGALLLVL 121 +V ES N R D G L AV L +A+I GP+ GWTSV + A+ L Sbjct: 180 LCYVEESCNERARRFDLSGQLLFIVAVGALVYAVIEGPQIGWTSVQTIVMLWTAAVGCAL 239 Query: 122 FIAWQRRAAHPMLELSLFRHAGFVAAVAAMFAYAASAQVMASLLPLFLQNARGLSAWQTG 181 F+ +RR+++PM++L+LFR + A+A + + M L FLQN RG + TG Sbjct: 240 FVWLERRSSNPMMDLTLFRDTSYALAIATICTVFFAVYGMLLLTTQFLQNVRGYTPSVTG 299 Query: 182 LAMLPFALAMLLL-PQVGSRLAR 203 L +LPF+ A+ ++ P VG + R Sbjct: 300 LMILPFSAAVAIVSPLVGHLVGR 322