BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0038.0122.p (953 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSp0175_1 [S] COG3501 Uncharacterized protein conserved in bacte... 411 e-114 RSp0768_1 [S] COG3501 Uncharacterized protein conserved in bacte... 347 6e-95 RSp0768_2 Non COG 325 2e-88 RSp0738_1 [S] COG3501 Uncharacterized protein conserved in bacte... 274 8e-73 RSp0175_2 Non COG 272 2e-72 >RSp0175_1 [S] COG3501 Uncharacterized protein conserved in bacteria Rso Ralstonia solanacearum Length = 649 Score = 411 bits (1057), Expect = e-114, Method: Compositional matrix adjust. Identities = 274/664 (41%), Positives = 363/664 (54%), Gaps = 52/664 (7%) Query: 3 DLLTQLMQ-FTGASRLYSLSLGDAAPAGELLVEAFAASEGLHAVGLREVIVLSLDAGLRL 61 D T L F A RLY+L P EL VEA+ E L + V+ S +A L Sbjct: 2 DFKTLLQHLFAPAHRLYALE--GEGPIAELAVEAWLGREALSELFEWRVVAASANARFAL 59 Query: 62 KSLIGQRATLVTTLSDGSRTQFSGLVNEAAKLGSEGGLARYRLRIVPWVWLLSQSHNSRV 121 +S IGQR TLVTTL+DG++ + +GL+ +A +LG++G LARYRL +VPW WL +Q +S+V Sbjct: 60 ESFIGQRVTLVTTLADGTQARRTGLIRQAEQLGADGSLARYRLTVVPWFWLATQQRHSQV 119 Query: 122 WQDKTVIDIVEDVFADYAPHAAWTWTDEVAPFMQQVQPRSYTIQYRESNLAFVSRLLAAE 181 +Q++ + DI+E V + YAP+AAW + M RS+ Q+RE++ FV+RLLA Sbjct: 120 FQNRPLADILEQVLSPYAPYAAWRFAAGAEDRMAAFGTRSHIAQFRETDYRFVTRLLAEA 179 Query: 182 GLSWRVEESADAASGHRLVLFADSTSPRAFPEDLTSTSPLGGSGIRFHAGTAREEQDSIQ 241 GL + E A SGH L++FAD SPR ED S + GIR+H ++EE+D+IQ Sbjct: 180 GLGFTTVEDEQAPSGHALLIFAD--SPR-LAEDTASAAE---GGIRYHRAHSQEERDAIQ 233 Query: 242 ALAARRALQPASFTLLSYDYKSKQAVATSLPTRHEFGGKDAPRLESYDSPGLYAYTDAAE 301 AL + ++D ++K+A +P+R G +P SP L D A Sbjct: 234 ALICHSRTAVGGVAVAAWDAQAKRAFRAHVPSRF-CGIAGSPDAYLSISPSL--APDTAN 290 Query: 302 ADHYARLHLEASEARNKLWQARSTVRTLRPGTRFTLADGPLGLSAAQDGASRQYAVLS-- 359 A A +E+ EAR +L+ R +VRTLR GTR + D P L DG Y +L Sbjct: 291 AQRIAEQVMESVEARARLFIGRGSVRTLRSGTRLKIVDCP-HLPKDVDGP---YPLLIDL 346 Query: 360 VMSVGVNNLPKDAAEGLAELFGPIPPLLE-DCVAACEEGQSLLHGQSGPDSLQLLGQTDI 418 V G+NNL D LA G + L D + E G P + + T Sbjct: 347 VEHCGINNLTADTQATLARKLGGLDAALTFDTPPSPPESGPGPFGFMAPHEV-IERFTPT 405 Query: 419 AGVIAQARQLGYANAFEAIRADVIWRPVLADGTGLRLHARATARGSQSAIVVGPQGETSA 478 A ++ AR GYA F A A WRPV++ RL+A TARG QSAIVVGP GET A Sbjct: 406 ADLLTAARAHGYAGQFRAGDARRPWRPVVSHPDTGRLYAEPTARGVQSAIVVGPNGETEA 465 Query: 479 SSAGEIHCDRLGRVRIRFHW-QGRNNDAAATCWVRVAQRAASGGAGMQFLPRIGQEVLVQ 537 S E H G+VR+RF W QG D +T W+ VAQR A G G Q+LPRIGQEVLV+ Sbjct: 466 SGDAEHHTTPRGQVRVRFPWQQGERPDDRSTGWLLVAQRQAGAGMGWQWLPRIGQEVLVK 525 Query: 538 FIEDDIDRPVIVGALYNGRGE-------------------------------GAAXQGNL 566 F EDDID+PV++GALYNG+GE A+ QGNL Sbjct: 526 FQEDDIDQPVVIGALYNGQGEAGIAPTPGGQVAKGVRQEADPETLYRLGSDSAASAQGNL 585 Query: 567 AGGNAPTWHGGSQDSDGHGNTAAQWGIRSKEFGGSGYNQIVFDDTDAQGRIQLKTTQSGS 626 A G++P WHG +++GH N AA G +S E GG G N +VFDD+D Q R QL TTQ+ S Sbjct: 586 AAGHSPAWHGLGTEAEGHRNAAALSGFKSAEHGGRGANLLVFDDSDGQLRTQLATTQAYS 645 Query: 627 ELNL 630 +LNL Sbjct: 646 QLNL 649 >RSp0768_1 [S] COG3501 Uncharacterized protein conserved in bacteria Rso Ralstonia solanacearum Length = 554 Score = 347 bits (891), Expect = 6e-95, Method: Compositional matrix adjust. Identities = 232/560 (41%), Positives = 314/560 (56%), Gaps = 22/560 (3%) Query: 5 LTQLMQ--FTGASRLYSLSLGDAAPAGELLVEAFAASEGLHAVGLREVIVLSLDAGLRLK 62 +T L+Q F A RLY+L P EL VEA+ E L + V+ S +A L+ Sbjct: 3 VTTLLQNLFAPAHRLYALE--GEGPIAELAVEAWLGREALSELFEWRVVAASANARFALE 60 Query: 63 SLIGQRATLVTTLSDGSRTQFSGLVNEAAKLGSEGGLARYRLRIVPWVWLLSQSHNSRVW 122 S IGQR TLVTTL+DG++ + +GL+ +A +LG++G LARYRL +VPW WL +Q +S+V+ Sbjct: 61 SFIGQRVTLVTTLADGTQARRTGLIRQAEQLGADGSLARYRLTVVPWFWLATQQRHSQVF 120 Query: 123 QDKTVIDIVEDVFADYAPHAAWTWTDEVAPFMQQVQPRSYTIQYRESNLAFVSRLLAAEG 182 Q++ + DI+E V + YAP+AAW + M RS+ Q+RE++ FV+RLLA G Sbjct: 121 QNRPLADILEQVLSPYAPYAAWRFAAGAEDRMAAFGTRSHIAQFRETDYRFVTRLLAEAG 180 Query: 183 LSWRVEESADAASGHRLVLFADSTSPRAFPEDLTSTSPLGGSGIRFHAGTAREEQDSIQA 242 L + E A SGH L++FAD SPR ED S + GIR+H ++EE+D+IQA Sbjct: 181 LGFTTVEDEQAPSGHALLIFAD--SPR-LAEDTASAAE---GGIRYHRAHSQEERDAIQA 234 Query: 243 LAARRALQPASFTLLSYDYKSKQAVATSLPTRHEFGGKDAPRLESYDSPGLYAYTDAAEA 302 L + ++D ++K+A +P+R G +P SP L D A A Sbjct: 235 LICHSRTAVGGVAVAAWDAQAKRAFRAHVPSRF-CGIAGSPDAYLSISPSL--APDTANA 291 Query: 303 DHYARLHLEASEARNKLWQARSTVRTLRPGTRFTLADGPLGLSAAQDGASRQYAVLS--V 360 A +E+ EAR +L+ R +VRTLR GTR + D P L DG Y +L V Sbjct: 292 QRIAEQVMESVEARARLFIGRGSVRTLRSGTRLKIVDCP-HLPKDVDGP---YPLLIDLV 347 Query: 361 MSVGVNNLPKDAAEGLAELFGPIPPLLE-DCVAACEEGQSLLHGQSGPDSLQLLGQTDIA 419 G+NNL D LA G + L D + E G P + + T A Sbjct: 348 EHCGINNLTADTQATLARKLGGLDAALTFDTPPSPPESGPGPFGFMAPHEV-IERFTPTA 406 Query: 420 GVIAQARQLGYANAFEAIRADVIWRPVLADGTGLRLHARATARGSQSAIVVGPQGETSAS 479 ++ AR GYA F A A WRPV++ RL+A TA+G +AIVVGP GET AS Sbjct: 407 DLLTAARAHGYAGQFRAGDARRPWRPVVSHPDTGRLYAEPTAKGVHTAIVVGPNGETEAS 466 Query: 480 SAGEIHCDRLGRVRIRFHW-QGRNNDAAATCWVRVAQRAASGGAGMQFLPRIGQEVLVQF 538 E H G+VR+RF W QG D +T W+ VAQR A G G Q+LPRIGQEVLV+F Sbjct: 467 GDAEHHTTPRGQVRVRFPWQQGERPDDRSTGWLLVAQRQAGAGMGWQWLPRIGQEVLVKF 526 Query: 539 IEDDIDRPVIVGALYNGRGE 558 EDDID+PV++GALYNG+GE Sbjct: 527 QEDDIDQPVVIGALYNGQGE 546 >RSp0768_2 Non COG Length = 452 Score = 325 bits (834), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 181/388 (46%), Positives = 243/388 (62%), Gaps = 13/388 (3%) Query: 552 LYN-GRGEGAAXQGNLAGGNAPTWHGGSQDSDGHGNTAAQWGIRSKEFGGSGYNQIVFDD 610 LY G A+ QGNLA G++P WHG +++GH N AA G +S E GG G N +VFDD Sbjct: 16 LYRLGSDSAASAQGNLAAGHSPAWHGLGTEAEGHRNAAALSGFKSAEHGGRGANLLVFDD 75 Query: 611 TDAQGRIQLKTTQSGSELNLGHLIHTADNYRGSFRGTGAELRTDAYGALRAGGGILFSSY 670 +D Q R QL TTQ+ S+LNLGHLIH DN RGSFRG G ELRTD YGA+R G+L ++Y Sbjct: 76 SDGQLRTQLATTQAYSQLNLGHLIHQQDNRRGSFRGQGFELRTDGYGAVRGHAGVLLTTY 135 Query: 671 KIEQNAASRDPAGDNVGGMALLKQAALLGKTFNEATLTHKTVGLASHLGPTQPSASTIND 730 + + + P GDN G+AL++QA L + ++ TH+T L ST D Sbjct: 136 R-DATSGKAVPTGDNAAGIALIRQAKQLTSSLSQGATTHQTAAL-----------STAKD 183 Query: 731 SAAPLEAIRVAASGMVDGSPENSGADVAAANTQTGESKLPHSTAALIGIAAKEGLGAVAG 790 +APL AASGMVDG ++ AAA T + K+PH + A + +A + GL A+AG Sbjct: 184 DSAPLAQQEKAASGMVDGKALDAARQDAAAGNTTTQGKVPHQSDATVQLAGRAGLVAIAG 243 Query: 791 QHMQLANGETVNLLSGADSQQVAGNQYRLRSGQALGVLAGAMAAGEGGTGLQMIAAQKNI 850 Q +Q A+GE++ L SG D+ G Q RL +GQ +GV AG AG+ GLQ+ A Q N+ Sbjct: 244 QDLQFASGESIALASGQDTNVAVGKQARLHAGQGIGVAAGLSKAGDDNIGLQLTAGQDNL 303 Query: 851 DVQAQADGLTAQARDQVRVISANAGVDWAAAKKITLSTAGGANITIEGGNITVQCPGKLT 910 DVQAQ D L ++D ++++SAN VD+AAAK+I L+TA GA+IT+EGGNI V+ PG++T Sbjct: 304 DVQAQHDALGLLSKDDLKLVSANLHVDFAAAKRIRLATAAGASITLEGGNIIVETPGRIT 363 Query: 911 IHAAQKLFAGPVSKTLPLPQMPNSVCKD 938 AAQ+ FAGP + L +S D Sbjct: 364 YKAAQRSFAGPTHASRELNTWSHSAFDD 391 >RSp0738_1 [S] COG3501 Uncharacterized protein conserved in bacteria Rso Ralstonia solanacearum Length = 609 Score = 274 bits (700), Expect = 8e-73, Method: Compositional matrix adjust. Identities = 227/672 (33%), Positives = 310/672 (46%), Gaps = 126/672 (18%) Query: 20 LSLGDAAPAGELLVEAFAASEGLHAVGLREVIVLSLDAGLRLKSLIGQRATLVTTLSDGS 79 ++L A + L+VE F A E + A + +V LS A L L Q ATL L+DGS Sbjct: 27 ITLETALTSDNLVVERFTAREAVSASCVLQVDCLSPLANLDTAQLASQEATLRLMLADGS 86 Query: 80 RTQFSGLVNEAAKLGSEGGLARYRLRIVPWVWLLSQSHNSRVWQDKTVIDIVEDVFADYA 139 R + G V + A LG GGLARYRLRI PW+ L + V+QDKT ++I+ED+FADY Sbjct: 87 RRAWHGYVTDCAALGGNGGLARYRLRIGPWLDRLHTRRDCFVYQDKTALEIIEDLFADY- 145 Query: 140 PHAAWTWTDEVAPFMQQVQPRSYTIQYRESNLAFVSRLLAAEGLSWRVE-ESAD------ 192 P A + Q RS QYRE++ FV RLLA EGLS R+E E D Sbjct: 146 PVAHYKLA-----VSQPCAKRSICCQYRETDYDFVMRLLAEEGLSLRIEHEQGDARRDGS 200 Query: 193 AASGHRLVLF-ADSTSPRAFPEDLTSTSPLGGSGIRFHAGTAREEQDSIQALAARRALQP 251 A S H +V+F D+ P D IRFH A E +D+I+ + R + Sbjct: 201 AQSRHCVVIFDNDAERPACAQPD-----------IRFHRVDATEREDAIERFSQMRTVGT 249 Query: 252 ASFTLLSYDYKSKQAVATSLPTRHEFGGKDAPRLESYDSPGLYAYTDAAEADHYARLHLE 311 + T+ S++YK+ A A G + P LE++++ G Y + DA A ARL ++ Sbjct: 250 NAVTVSSWNYKALAATAAQASASDP--GGELPALEAFEAAGPYRFADAQGAGRAARLRMQ 307 Query: 312 ASEARNKLWQARSTVRTLRPGTRFTLADGPLGLSAAQDGASRQYAVLSVMSVGVNNLPKD 371 A E + + +VR L PG RFT L+ D Q+ LSV NNL Sbjct: 308 AHEGAYLRYLGQGSVRQLGPGQRFT-------LTQHFDTRHSQFVTLSVEHEAANNL--- 357 Query: 372 AAEGLAELFGPIPPLLEDCVAACEEGQSLLHGQSGPDSLQLLGQTDIAGVIAQARQLGYA 431 G D +LLG TDI Y Sbjct: 358 ----------------------------------GADLARLLGTTDIESG-------RYR 376 Query: 432 NAFEAIRADVIWRPVLADGTGLRLHARATARGSQSAIVVGPQGETSASSAGEIHCDRLGR 491 N F A+ A+ P++ R TA Q+A V+ G + DR R Sbjct: 377 NRFVAVPAEA---PIVPP-----YRHRPTAPEGQAATVIADDG-------APLTTDRDHR 421 Query: 492 VRIRFHW-----------QGRNNDAAATCWVRVAQRAASGGAGMQFLPRIGQEVLVQFIE 540 VRIRF W ++ + T WVRVA +A G LPR G +VL+ F++ Sbjct: 422 VRIRFPWLRAPALNAFAEPAGSDRSQVTAWVRVATASAGPNWGAHHLPRAGTQVLLTFVD 481 Query: 541 DDIDRPVIVGALYNGRGEGAAXQGNLAGGNAPT-WHGGSQDSDGHGNTAAQWGIRSKEFG 599 DIDRP++ L+N + + G A + WH S G Sbjct: 482 GDIDRPLVTMQLHNEQDALPWPAADAPLGQALSGWH-------------------SPSLG 522 Query: 600 GSGYNQIVFDDTDAQGRIQLKTTQSGSELNLGHLIHTADN--YRGSFRGTGAELRTDAYG 657 G GYNQ V DD AQ R++L ++ +GS+LNLG+++ RG +RGTGAELRTDA+ Sbjct: 523 GDGYNQWVVDDHPAQLRMRLASSTAGSQLNLGYVVSHGPTGGERGDWRGTGAELRTDAWA 582 Query: 658 ALRAGGGILFSS 669 +RAGGG+L S+ Sbjct: 583 VVRAGGGLLLST 594 >RSp0175_2 Non COG Length = 313 Score = 272 bits (696), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 147/314 (46%), Positives = 200/314 (63%), Gaps = 12/314 (3%) Query: 631 GHLIHTADNYRGSFRGTGAELRTDAYGALRAGGGILFSSYKIEQNAASRDPAGDNVGGMA 690 GHLIH DN RGSFRG G ELRTD YGA+R G+L ++Y+ + + P GDN G+A Sbjct: 1 GHLIHQQDNRRGSFRGQGFELRTDGYGAVRGQAGVLLTTYR-DATSGKAVPTGDNAAGIA 59 Query: 691 LLKQAALLGKTFNEATLTHKTVGLASHLGPTQPSASTINDSAAPLEAIRVAASGMVDGSP 750 L++QA L + ++ TH+T L ST D +APL AASGMVDG Sbjct: 60 LIRQAKQLTASLSQGATTHQTAAL-----------STAKDDSAPLAKQEKAASGMVDGKA 108 Query: 751 ENSGADVAAANTQTGESKLPHSTAALIGIAAKEGLGAVAGQHMQLANGETVNLLSGADSQ 810 ++ AAA + K+PH + A + +A + GL A+AGQ +Q ANGE+V L SG D+ Sbjct: 109 LDAAQQDAAAGNTATQGKVPHQSEATVQLAGRAGLVAIAGQDLQFANGESVVLASGQDTN 168 Query: 811 QVAGNQYRLRSGQALGVLAGAMAAGEGGTGLQMIAAQKNIDVQAQADGLTAQARDQVRVI 870 G Q R+ +GQ +GV AG AG+ GLQ+ A Q N+DVQAQ D L ++D ++++ Sbjct: 169 VAVGKQARIHAGQGIGVAAGLSKAGDDNIGLQLTAGQDNLDVQAQHDALGLLSKDDLKLV 228 Query: 871 SANAGVDWAAAKKITLSTAGGANITIEGGNITVQCPGKLTIHAAQKLFAGPVSKTLPLPQ 930 SAN VD+AAAK+I L+TA GA+IT+EGGNI V+ PG++T AAQ+ FAGPV+++ PLP Sbjct: 229 SANLHVDFAAAKRIRLATAAGASITLEGGNIIVETPGRITYKAAQRSFAGPVTQSYPLPV 288 Query: 931 MPNSVCKDCILNAM 944 P VC +C+L AM Sbjct: 289 FPQGVCVECVLRAM 302