BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0038.0101.p (495 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSp0744 [S] COG3517 Uncharacterized protein conserved in bacteri... 850 0.0 PA2366 [S] COG3517 Uncharacterized protein conserved in bacteria... 559 e-159 AGl1047 [S] COG3517 Uncharacterized protein conserved in bacteri... 531 e-150 YPO2938 [S] COG3517 Uncharacterized protein conserved in bacteri... 475 e-133 PA0084 [S] COG3517 Uncharacterized protein conserved in bacteria... 474 e-133 >RSp0744 [S] COG3517 Uncharacterized protein conserved in bacteria Rso Ralstonia solanacearum Length = 496 Score = 850 bits (2195), Expect = 0.0, Method: Compositional matrix adjust. Identities = 394/479 (82%), Positives = 449/479 (93%) Query: 17 SASLLDDIVEQSKVAKSASEHDRAKDLITELVNQVMEGTVVVSSNLSATLDARIAELDKL 76 S +LLD+IVEQS+VAKS +EH RAKD+I ELVNQV++GTVVVS NLSATLDAR+AELD+L Sbjct: 18 SVNLLDEIVEQSRVAKSDAEHARAKDIIGELVNQVLQGTVVVSDNLSATLDARVAELDRL 77 Query: 77 ISSQVSAIMHAPEFQKLEGSWTGLNYLVRNTTVGENQKIKILNATKKELVKDFNSALEFD 136 ISSQ+SA+MH PEFQKLEG+W GL+YLV+ T KIK+LNATK++LV+DF +A++FD Sbjct: 78 ISSQLSAVMHTPEFQKLEGTWRGLSYLVKETQTSTMLKIKVLNATKRDLVRDFKTAIDFD 137 Query: 137 QSAMFKKVYEEEFGTFGGAPFGVLLGDFEITRQPEDMYFIEQMSRIAAASHAPFVTAASP 196 QSA+FKKVYEEEFGTFGGAPFG L+GDFE+TRQPED+YFIEQMS +AAA+HAPF+ ++SP Sbjct: 138 QSALFKKVYEEEFGTFGGAPFGTLIGDFEVTRQPEDVYFIEQMSHVAAAAHAPFIASSSP 197 Query: 197 ELFGLESYADLGKPRDLSKVFDTVEYAKWKSFRESEDSRYVGLTLPRFLGRLPFNPKDGT 256 ELFGLES+ADLGKPRDL+KVFDTVEYAKWKSFRESEDSRYVGLT+PRFLGRLP+NPKDGT Sbjct: 198 ELFGLESFADLGKPRDLAKVFDTVEYAKWKSFRESEDSRYVGLTMPRFLGRLPYNPKDGT 257 Query: 257 TVEGFNFVEDVDGSDHSKYLWCNAAYAFGTKLTKAFEDFGWCAAIRGVEGGGLVEDLPTH 316 TVEGFNFVEDVDG+DHSKYLWCNAA+AFG +LT AFEDFGWCAAIRGVEGGGLVEDLPTH Sbjct: 258 TVEGFNFVEDVDGTDHSKYLWCNAAWAFGARLTAAFEDFGWCAAIRGVEGGGLVEDLPTH 317 Query: 317 TFKTDEGEVALKCPTEIAITDRREKELSDLGFISLVHCKNTDYAAFFGAQSAQKPKKYNT 376 TFKTD+GE+ALKCPTEIAITDRREKELSDLGFI LVHCKN+DYAAFF AQS Q+PKKY+T Sbjct: 318 TFKTDDGEIALKCPTEIAITDRREKELSDLGFIPLVHCKNSDYAAFFAAQSVQRPKKYDT 377 Query: 377 DSANANAVLSSQLQYIFAVSRIAHYMKSMMRDKIGSFAAASNVEDFLNRWISQYVLLDDN 436 DSANANAVLS+QLQYIF+VSR+AHY+K+MMRDKIGSFA+A NVE FLNRWISQYVLLDDN Sbjct: 378 DSANANAVLSAQLQYIFSVSRVAHYLKAMMRDKIGSFASAKNVETFLNRWISQYVLLDDN 437 Query: 437 ATQEAKAQFPLREASVQVSEVPGRPGVYRAVSFLRPHFQLDELSVSLRLVAELPQAGKS 495 ATQE KAQFPLREAS+QVSEVPG+PG YR+V+FLRPHFQLDELS+SLRLVA+LP+ S Sbjct: 438 ATQEQKAQFPLREASIQVSEVPGKPGTYRSVAFLRPHFQLDELSISLRLVADLPKPTNS 496 >PA2366 [S] COG3517 Uncharacterized protein conserved in bacteria Pae Pseudomonas aeruginosa Length = 494 Score = 559 bits (1440), Expect = e-159, Method: Compositional matrix adjust. Identities = 272/484 (56%), Positives = 359/484 (74%), Gaps = 1/484 (0%) Query: 7 SETAAAPAAASASLLDDIVEQSKVAKSASEHDRAKDLITELVNQVMEGTVVVSSNLSATL 66 +E + + + SLLD+I+ + ++A S+ D A+D++ E QV++ + V + A + Sbjct: 7 AEQSGESSTQTLSLLDEIIAKGRMAHDDSQQDYARDMLAEFATQVLDEGMAVDKDTVAMI 66 Query: 67 DARIAELDKLISSQVSAIMHAPEFQKLEGSWTGLNYLVRNTTVGENQKIKILNATKKELV 126 + RI+++D LIS Q++ I+H PE QKLE SW GL+ LV NT K+++LN K EL Sbjct: 67 NDRISQIDALISDQLNQIIHHPELQKLEASWRGLHQLVSNTETSARLKLRLLNVGKNELQ 126 Query: 127 KDFNSALEFDQSAMFKKVYEEEFGTFGGAPFGVLLGDFEITRQPEDMYFIEQMSRIAAAS 186 D A+EFDQSA+FKK+YEEE+GTFGG PF +L+GDF R P+D+ +E++S +AAA+ Sbjct: 127 NDLEKAVEFDQSALFKKIYEEEYGTFGGHPFSLLIGDFTFGRHPQDIGLLEKLSNVAAAA 186 Query: 187 HAPFVTAASPELFGLESYADLGKPRDLSKVFDTVEYAKWKSFRESEDSRYVGLTLPRFLG 246 HAPF+ AASP LF + S+ +L PRDL+K+F+++E KW++FRESEDSRYV L LP FL Sbjct: 187 HAPFIAAASPRLFDMNSFTELAVPRDLTKIFESLELIKWRAFRESEDSRYVSLVLPNFLL 246 Query: 247 RLPFNPKDGTTVEGFNFVEDVDGSDHSKYLWCNAAYAFGTKLTKAFEDFGWCAAIRGVEG 306 RLP+ P + VEG N+VEDV+G+DHSKYLW NAA+ ++T+AF +GWCAAIRG EG Sbjct: 247 RLPYGP-ETRPVEGMNYVEDVNGTDHSKYLWGNAAWVLAQRITEAFAKYGWCAAIRGAEG 305 Query: 307 GGLVEDLPTHTFKTDEGEVALKCPTEIAITDRREKELSDLGFISLVHCKNTDYAAFFGAQ 366 GG VE LP HTF+T G+++LKCPTE+AITDRREKEL+DLGFISL H KN+D A FFG Q Sbjct: 306 GGAVEGLPAHTFRTSSGDLSLKCPTEVAITDRREKELNDLGFISLCHKKNSDVAVFFGGQ 365 Query: 367 SAQKPKKYNTDSANANAVLSSQLQYIFAVSRIAHYMKSMMRDKIGSFAAASNVEDFLNRW 426 + K + YNT+ ANANA LS+ L Y+ A SR AHY+K +MRDK+GSF NV+ +LN W Sbjct: 366 TTNKARLYNTNEANANARLSAMLPYVLAASRFAHYLKVIMRDKVGSFMTRDNVQTYLNNW 425 Query: 427 ISQYVLLDDNATQEAKAQFPLREASVQVSEVPGRPGVYRAVSFLRPHFQLDELSVSLRLV 486 I+ YVL++DNA QE KAQ+PLREA V VSEV G+PG YRA FLRPHFQL+ELS S+RLV Sbjct: 426 IADYVLINDNAPQEIKAQYPLREARVDVSEVAGKPGAYRATVFLRPHFQLEELSASIRLV 485 Query: 487 AELP 490 A LP Sbjct: 486 ANLP 489 >AGl1047 [S] COG3517 Uncharacterized protein conserved in bacteria Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 493 Score = 531 bits (1369), Expect = e-150, Method: Compositional matrix adjust. Identities = 268/496 (54%), Positives = 354/496 (71%), Gaps = 12/496 (2%) Query: 1 MSAQ--LHSETAAAPAAASASLLDDIVEQSKVAKSASEHDRAKDLITELVNQVMEGTVVV 58 MSA+ L SE A A A + LL +V ++ +E DRA++L+ L +Q ++GTV Sbjct: 1 MSAESLLKSE-AQATTAENQGLLSKVVSATR----QTEPDRAQNLLRTLTDQALKGTVKY 55 Query: 59 SSNLSATLDARIAELDKLISSQVSAIMHAPEFQKLEGSWTGLNYLVRNTTVGENQKIKIL 118 NL+ TL+ IAELD+ IS Q++AIM APEF KLEG+W GLNYLV+N+ N KI+++ Sbjct: 56 DRNLTVTLNHAIAELDRTISEQLAAIMQAPEFAKLEGTWRGLNYLVKNSETSVNLKIRVM 115 Query: 119 NATKKELVKDFNSALEFDQSAMFKKVYEEEFGTFGGAPFGVLLGDFEITRQPEDMYFIEQ 178 NA K+EL +D A+EFDQS +FK +YE+EFGT GG P G ++GD+E +D+ ++ Sbjct: 116 NAGKRELARDLEKAVEFDQSRLFKAIYEDEFGTPGGEPLGAIIGDYEFGNSFDDVQLLQG 175 Query: 179 MSRIAAASHAPFVTAASPELFGLESYADLGKPRDLSKVFDTVEYAKWKSFRESEDSRYVG 238 +S IAAA+ APF++AASP +FG E Y DL +PRDL K+FDTVEYAKW+SFRES+DSR+V Sbjct: 176 VSSIAAAAFAPFISAASPHMFGFEDYRDLARPRDLEKIFDTVEYAKWRSFRESDDSRFVT 235 Query: 239 LTLPRFLGRLPFNPKDGTTVEGFNFVED---VDGS-DHSKYLWCNAAYAFGTKLTKAFED 294 L LPR L R+P+ PK V+ F + E V+G H +Y W NAAY GTKLT+AF Sbjct: 236 LALPRVLARMPYGPKT-NPVDDFAYDETRGAVNGDLQHDEYCWMNAAYVMGTKLTEAFAK 294 Query: 295 FGWCAAIRGVEGGGLVEDLPTHTFKTDEGEVALKCPTEIAITDRREKELSDLGFISLVHC 354 GWC AIRG E GG VE+LP H F +D+G++ LKCPTE+ ITDRR+ EL LGF+ L H Sbjct: 295 SGWCTAIRGAENGGRVENLPMHVFSSDDGDLDLKCPTEVGITDRRDAELGKLGFLPLCHY 354 Query: 355 KNTDYAAFFGAQSAQKPKKYNTDSANANAVLSSQLQYIFAVSRIAHYMKSMMRDKIGSFA 414 KNTDYA FFGAQ+A KPK Y+ A ANA +S++L YI A SR AHY+K M RDKIGSF Sbjct: 355 KNTDYAVFFGAQTAHKPKLYDKPEATANAAVSARLPYIMATSRFAHYLKVMGRDKIGSFM 414 Query: 415 AASNVEDFLNRWISQYVLLDDNATQEAKAQFPLREASVQVSEVPGRPGVYRAVSFLRPHF 474 AS+ E +LNRWI+ YV +D A +E++A++PLR+A V V EVPG+PG Y AV+++RP Sbjct: 415 EASDCEVWLNRWIANYVNANDEAGEESRAKYPLRDAKVTVQEVPGKPGAYNAVAWMRPWL 474 Query: 475 QLDELSVSLRLVAELP 490 Q++EL+ SLR+VA +P Sbjct: 475 QMEELTTSLRMVARIP 490 >YPO2938 [S] COG3517 Uncharacterized protein conserved in bacteria Ype Yersinia pestis Length = 500 Score = 475 bits (1222), Expect = e-133, Method: Compositional matrix adjust. Identities = 232/495 (46%), Positives = 326/495 (65%), Gaps = 6/495 (1%) Query: 1 MSAQ-LHSETAAAPAAASASLLDDIVEQSKVAKSASEHDRAKDLITELVNQVMEGTVVVS 59 MS Q ++ A +A S + ++ + AKS + + L Q + +V VS Sbjct: 1 MSTQDAKTKQATVASATEYSDFNTLLTKEFKAKSEQTIAAVEGAVKTLAEQALANSVTVS 60 Query: 60 SNLSATLDARIAELDKLISSQVSAIMHAPEFQKLEGSWTGLNYLVRNTTVGENQKIKILN 119 + ++ + IAE+D+ +S Q++ I+H EFQ LE +W GL+YLV NT E +++ L+ Sbjct: 61 DDAYKSIASIIAEIDRKLSDQINLILHHQEFQSLESAWRGLHYLVNNTETDEKLRLRFLD 120 Query: 120 ATKKELVKDFN--SALEFDQSAMFKKVYEEEFGTFGGAPFGVLLGDFEITRQPEDMYFIE 177 +K EL ++ + +DQS +FKK+YEEE+G GG P+G L+ D+ D+ + Sbjct: 121 ISKDELRRNMKRYKGVAWDQSPLFKKIYEEEYGQLGGEPYGCLVADYYFDHTAPDVDLLA 180 Query: 178 QMSRIAAASHAPFVTAASPELFGLESYADLGKPRDLSKVF-DTVEYAKWKSFRESEDSRY 236 + ++AA++H PF+T A+P + +ES+ +L PRDL+K+F +EYA W S R+SEDSRY Sbjct: 181 SIGKVAASAHVPFITGAAPSVLQMESWQELSNPRDLTKIFTQNLEYAAWNSLRQSEDSRY 240 Query: 237 VGLTLPRFLGRLPFNPKDGTTVEGFNFVEDVDGSDHSKYLWCNAAYAFGTKLTKAFEDFG 296 +GL +PRFL RLP+ + V+ F+F E DG+DHSKY+W NAAYA + ++F+++G Sbjct: 241 IGLAMPRFLSRLPYG-INTNPVDAFHFEETTDGADHSKYVWSNAAYAMAVNINRSFKEYG 299 Query: 297 WCAAIRGVEGGGLVEDLPTHTFKTDEGEVALKCPTEIAITDRREKELSDLGFISLVHCKN 356 WC IRGVE GG+VE LP HTF TD+G + +KCPTEIAI+DRRE EL+ GFI LVH KN Sbjct: 300 WCTLIRGVESGGVVEGLPCHTFPTDDGGIDMKCPTEIAISDRREAELAKNGFIPLVHRKN 359 Query: 357 TDYAAFFGAQSAQKPKKYNTDSANANAVLSSQLQYIFAVSRIAHYMKSMMRDKIGSFAAA 416 TDYAAF GAQS QKP +Y A ANA LS++L Y+FA SR AHY+K ++RDKIGSF Sbjct: 360 TDYAAFIGAQSLQKPAEYYDSDATANANLSARLPYLFACSRFAHYLKCIVRDKIGSFKER 419 Query: 417 SNVEDFLNRWISQYVLLDD-NATQEAKAQFPLREASVQVSEVPGRPGVYRAVSFLRPHFQ 475 ++ +LN W+ YV D N++ E KA+ PL A V V EV G PG Y+A FLRPHFQ Sbjct: 420 DEMQRWLNDWVMNYVDGDPANSSLETKARRPLAAAEVIVEEVEGNPGYYQAKFFLRPHFQ 479 Query: 476 LDELSVSLRLVAELP 490 L+ L+VSLR+VA+LP Sbjct: 480 LEGLTVSLRMVAKLP 494 >PA0084 [S] COG3517 Uncharacterized protein conserved in bacteria Pae Pseudomonas aeruginosa Length = 498 Score = 474 bits (1220), Expect = e-133, Method: Compositional matrix adjust. Identities = 235/476 (49%), Positives = 325/476 (68%), Gaps = 9/476 (1%) Query: 20 LLDDIVEQSKVAKSASEHDRAKDLITELVNQVMEGTVVVSSNLSATLDARIAELDKLISS 79 LL + +++ A+ A E + L +E T ++S++ ++++ IA LD +++ Sbjct: 26 LLQEFKPKTERAREAVE-----TAVRTLAEHALEQTSLISNDAIKSIESIIAALDAKLTA 80 Query: 80 QVSAIMHAPEFQKLEGSWTGLNYLVRNTTVGENQKIKILNATKKELVKDFNS--ALEFDQ 137 QV+ IMH +FQ+LE +W GL+YLV NT E KI++LN +K EL K +DQ Sbjct: 81 QVNLIMHHADFQQLESAWRGLHYLVNNTETDEQLKIRVLNISKPELHKTLKKFKGTTWDQ 140 Query: 138 SAMFKKVYEEEFGTFGGAPFGVLLGDFEITRQPEDMYFIEQMSRIAAASHAPFVTAASPE 197 S +FKK+YEEE+G FGG P+G L+GD+ + P D+ + +M++I+AA HAPF++AASP Sbjct: 141 SPIFKKLYEEEYGQFGGEPYGCLVGDYYFDQSPPDVELLGEMAKISAAMHAPFISAASPT 200 Query: 198 LFGLESYADLGKPRDLSKVFDTVEYAKWKSFRESEDSRYVGLTLPRFLGRLPFNPKDGTT 257 + G+ S+ +L PRDL+K+F T EYA W+S RESEDSRY+GLT+PRFL RLP+ K Sbjct: 201 VMGMGSWQELSNPRDLTKIFTTPEYAGWRSLRESEDSRYIGLTMPRFLARLPYGAKTDP- 259 Query: 258 VEGFNFVEDVDGSDHSKYLWCNAAYAFGTKLTKAFEDFGWCAAIRGVEGGGLVEDLPTHT 317 VE F F E+ DG+D SKY W N+AYA + ++F+ +GWC+ IRGVE GG V+ LP HT Sbjct: 260 VEEFAFEEETDGADSSKYAWANSAYAMAVNINRSFKLYGWCSRIRGVESGGEVQGLPAHT 319 Query: 318 FKTDEGEVALKCPTEIAITDRREKELSDLGFISLVHCKNTDYAAFFGAQSAQKPKKYNTD 377 F TD+G V +KCPTEIAI+DRRE EL+ GF+ L+H KNTD+AAF GAQS QKP +Y+ Sbjct: 320 FPTDDGGVDMKCPTEIAISDRREAELAKNGFMPLLHKKNTDFAAFIGAQSLQKPAEYDDP 379 Query: 378 SANANAVLSSQLQYIFAVSRIAHYMKSMMRDKIGSFAAASNVEDFLNRWISQYVLLDD-N 436 A ANA L+++L Y+FA R AHY+K ++RDKIGSF ++ +L WI YV D + Sbjct: 380 DATANANLAARLPYLFATCRFAHYLKCIVRDKIGSFKEKDEMQRWLQDWILNYVDGDPAH 439 Query: 437 ATQEAKAQFPLREASVQVSEVPGRPGVYRAVSFLRPHFQLDELSVSLRLVAELPQA 492 +T+ KAQ PL A V V EV G PG Y + FLRPH+QL+ L+VSLRLV++LP A Sbjct: 440 STETTKAQHPLAAAEVVVEEVEGNPGYYNSKFFLRPHYQLEGLTVSLRLVSKLPSA 495