BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0038.0088.p (316 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z5689 [G] COG1879 ABC-type sugar transport system, periplasmic c... 344 1e-94 ECs5071 [G] COG1879 ABC-type sugar transport system, periplasmic... 344 1e-94 PM1377 [G] COG1879 ABC-type sugar transport system, periplasmic ... 337 2e-92 YPO3962 [G] COG1879 ABC-type sugar transport system, periplasmic... 333 4e-91 mll3596 [G] COG1879 ABC-type sugar transport system, periplasmic... 306 3e-83 >Z5689 [G] COG1879 ABC-type sugar transport system, periplasmic component EcZ Escherichia coli O157:H7 EDL933 Length = 313 Score = 344 bits (883), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 188/288 (65%), Positives = 233/288 (80%), Gaps = 4/288 (1%) Query: 27 KPLKSVGVTVGDLANPFFVAIAKGAESGAHKINPD-AKVTVVSSKYDLNTQVGQIENFIA 85 K LKS+GVTVGDLANPFFV I KGAE A K+ D KVT+VSS YDL QV QI+NFIA Sbjct: 25 KELKSIGVTVGDLANPFFVQITKGAELEARKLAGDNVKVTLVSSGYDLGQQVSQIDNFIA 84 Query: 86 NKVDLIVLNAADSKGVGPAVKKAQKAGIVVVAVDVAAAGADVTVMSDNTMAGAESCKFLA 145 VD+I+LNAADSKG+GPAVK+A+ AGIVVVAVDVAA GAD T+ SDNT AG +CK++ Sbjct: 85 ANVDMIILNAADSKGIGPAVKRAKDAGIVVVAVDVAAEGADATITSDNTQAGEMACKYIT 144 Query: 146 EKLQGKGNVVIVNGPPVSAVMDRVTGCKAEFKKSPGIKILSDNQNAGGSRDGGMTTMSNL 205 ++L+GKGNVVI+NGPPVSAV +RV GC+ EFK+ P IK+LSDNQNA GSR+GG+ M+ L Sbjct: 145 DRLKGKGNVVIINGPPVSAVQNRVEGCQTEFKRHPDIKVLSDNQNAKGSREGGLEVMTGL 204 Query: 206 LAAQPKIDAVFAINDPTAIGAELAIRQAKRSDIKWISGVDGAPDAERALKDSKSLFAASP 265 LAA PKID VFAINDPTAIGA+LA +QA+R++ +I GVDG+PDAE ALK SLF A+P Sbjct: 205 LAANPKIDGVFAINDPTAIGADLAAKQAQRNEF-FIVGVDGSPDAEEALKRENSLFVATP 263 Query: 266 AQDPYGMAAESVAIGYAVMNGR-APQQKVKLLPVKLITRDNVADYQGW 312 AQDP MAA++V IGY ++ G+ AP++ V L+PV +I ++NV +Y+GW Sbjct: 264 AQDPQVMAAKAVEIGYDILQGKPAPKEPV-LIPVTMIDKNNVGNYKGW 310 >ECs5071 [G] COG1879 ABC-type sugar transport system, periplasmic component Ecs Escherichia coli O157:H7 Length = 313 Score = 344 bits (883), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 188/288 (65%), Positives = 233/288 (80%), Gaps = 4/288 (1%) Query: 27 KPLKSVGVTVGDLANPFFVAIAKGAESGAHKINPD-AKVTVVSSKYDLNTQVGQIENFIA 85 K LKS+GVTVGDLANPFFV I KGAE A K+ D KVT+VSS YDL QV QI+NFIA Sbjct: 25 KELKSIGVTVGDLANPFFVQITKGAELEARKLAGDNVKVTLVSSGYDLGQQVSQIDNFIA 84 Query: 86 NKVDLIVLNAADSKGVGPAVKKAQKAGIVVVAVDVAAAGADVTVMSDNTMAGAESCKFLA 145 VD+I+LNAADSKG+GPAVK+A+ AGIVVVAVDVAA GAD T+ SDNT AG +CK++ Sbjct: 85 ANVDMIILNAADSKGIGPAVKRAKDAGIVVVAVDVAAEGADATITSDNTQAGEMACKYIT 144 Query: 146 EKLQGKGNVVIVNGPPVSAVMDRVTGCKAEFKKSPGIKILSDNQNAGGSRDGGMTTMSNL 205 ++L+GKGNVVI+NGPPVSAV +RV GC+ EFK+ P IK+LSDNQNA GSR+GG+ M+ L Sbjct: 145 DRLKGKGNVVIINGPPVSAVQNRVEGCQTEFKRHPDIKVLSDNQNAKGSREGGLEVMTGL 204 Query: 206 LAAQPKIDAVFAINDPTAIGAELAIRQAKRSDIKWISGVDGAPDAERALKDSKSLFAASP 265 LAA PKID VFAINDPTAIGA+LA +QA+R++ +I GVDG+PDAE ALK SLF A+P Sbjct: 205 LAANPKIDGVFAINDPTAIGADLAAKQAQRNEF-FIVGVDGSPDAEEALKRENSLFVATP 263 Query: 266 AQDPYGMAAESVAIGYAVMNGR-APQQKVKLLPVKLITRDNVADYQGW 312 AQDP MAA++V IGY ++ G+ AP++ V L+PV +I ++NV +Y+GW Sbjct: 264 AQDPQVMAAKAVEIGYDILQGKPAPKEPV-LIPVTMIDKNNVGNYKGW 310 >PM1377 [G] COG1879 ABC-type sugar transport system, periplasmic component Pmu Pasteurella multocida Length = 309 Score = 337 bits (865), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 193/303 (63%), Positives = 232/303 (76%), Gaps = 7/303 (2%) Query: 12 TLLLAAAAQPAMAADKPLKSVGVTVGDLANPFFVAIAKGAESGAHKINPD-AKVTVVSSK 70 +L+LA A A K LKS+GVTVGDLANPFFV IAKGAE A ++ D V VSS Sbjct: 9 SLMLAMAP---FAQAKELKSIGVTVGDLANPFFVQIAKGAELKAKELAGDKVNVVSVSSG 65 Query: 71 YDLNTQVGQIENFIANKVDLIVLNAADSKGVGPAVKKAQKAGIVVVAVDVAAAGADVTVM 130 YDL QV QI+NFIA K D+I+LNAADSKG+GPAV++A+KAGIVVVAVDVAA GAD TV Sbjct: 66 YDLGQQVAQIDNFIAAKTDMIILNAADSKGIGPAVERARKAGIVVVAVDVAADGADATVT 125 Query: 131 SDNTMAGAESCKFLAEKLQGKGNVVIVNGPPVSAVMDRVTGCKAEFKKSPGIKILSDNQN 190 S+N AG +C+ + EKL GKGNVVI+NGPPVSAV DRV GC+ F K IK+LS NQN Sbjct: 126 SNNYQAGEIACQTIVEKLNGKGNVVIINGPPVSAVQDRVQGCQDVFAKHADIKVLSHNQN 185 Query: 191 AGGSRDGGMTTMSNLLAAQPKIDAVFAINDPTAIGAELAIRQAKRSDIKWISGVDGAPDA 250 A GSR+GG+ M++LL A PKIDAVFAINDPTAIGA+LA +QA+R++ +I GVDG+PD Sbjct: 186 AKGSREGGLEVMTSLLIAHPKIDAVFAINDPTAIGADLAAKQAQRNEF-FIMGVDGSPDG 244 Query: 251 ERALKDSKSLFAASPAQDPYGMAAESVAIGYAVMNGR-APQQKVKLLPVKLITRDNVADY 309 E ALK S SLF +PAQDP MAAE+V IGY ++ G+ AP+ V L+PV LITRDN+ DY Sbjct: 245 EEALKLSDSLFRGTPAQDPQVMAAEAVKIGYDILQGKPAPKDPV-LIPVHLITRDNIKDY 303 Query: 310 QGW 312 +GW Sbjct: 304 KGW 306 >YPO3962 [G] COG1879 ABC-type sugar transport system, periplasmic component Ype Yersinia pestis Length = 314 Score = 333 bits (853), Expect = 4e-91, Method: Compositional matrix adjust. Identities = 183/297 (61%), Positives = 234/297 (78%), Gaps = 4/297 (1%) Query: 18 AAQPAMAADKPLKSVGVTVGDLANPFFVAIAKGAESGAHKINPD-AKVTVVSSKYDLNTQ 76 A+ PA+ A K L S+GVTVGDLANPFFV I KG E A K+ D KVT+VSS YDL Q Sbjct: 17 ASSPALQA-KELNSIGVTVGDLANPFFVQITKGVELEARKLAGDKVKVTLVSSGYDLGQQ 75 Query: 77 VGQIENFIANKVDLIVLNAADSKGVGPAVKKAQKAGIVVVAVDVAAAGADVTVMSDNTMA 136 V QI+NFIA KVD+I+LNAADSKG+GPAVK+A+ AGIVVVAVDVAA GAD T+ SDNT A Sbjct: 76 VAQIDNFIAAKVDMIILNAADSKGIGPAVKRAKDAGIVVVAVDVAAEGADATITSDNTQA 135 Query: 137 GAESCKFLAEKLQGKGNVVIVNGPPVSAVMDRVTGCKAEFKKSPGIKILSDNQNAGGSRD 196 GA +CK+++++L+ KGNVVI+NGPPVSA+ +RV GC++EFKK P IK+LS NQNA GSR+ Sbjct: 136 GAMACKYISDRLKEKGNVVIINGPPVSAIQNRVEGCESEFKKYPDIKVLSSNQNAKGSRE 195 Query: 197 GGMTTMSNLLAAQPKIDAVFAINDPTAIGAELAIRQAKRSDIKWISGVDGAPDAERALKD 256 GG+ M++LLA PKID VFAINDPTAIGA+LA +QA+R++ +I GVDG+PDAE ALK Sbjct: 196 GGLEVMTSLLAVNPKIDGVFAINDPTAIGADLAAKQAQRNEF-FIVGVDGSPDAEEALKR 254 Query: 257 -SKSLFAASPAQDPYGMAAESVAIGYAVMNGRAPQQKVKLLPVKLITRDNVADYQGW 312 +LF A+PAQDP MA+++V +GY ++ G + L+PV LI ++N++ Y+GW Sbjct: 255 GGNTLFVATPAQDPQVMASKAVEVGYGILQGNPAPKDPILIPVTLIDKNNISTYKGW 311 >mll3596 [G] COG1879 ABC-type sugar transport system, periplasmic component Mlo Mesorhizobium loti Length = 324 Score = 306 bits (785), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 155/290 (53%), Positives = 203/290 (70%), Gaps = 1/290 (0%) Query: 27 KPLKSVGVTVGDLANPFFVAIAKGAESGAHKINPDAKVTVVSSKYDLNTQVGQIENFIAN 86 K L VG++VG L NPFFVA KG E A KINP +VT VS+ YDLN QV Q+++FIA Sbjct: 36 KDLNKVGISVGLLGNPFFVATIKGIEDAAKKINPKVEVTSVSADYDLNKQVSQVDSFIAA 95 Query: 87 KVDLIVLNAADSKGVGPAVKKAQKAGIVVVAVDVAAAGADVTVMSDNTMAGAESCKFLAE 146 VD+I+LNA D+K + PAVKKAQ AGI+V A DV+A GADVTVM++N AG E+C++L + Sbjct: 96 GVDVIMLNAVDAKAIAPAVKKAQAAGIIVAAFDVSAPGADVTVMTNNVKAGEEACQYLVD 155 Query: 147 KLQGKGNVVIVNGPPVSAVMDRVTGCKAEFKKSPGIKILSDNQNAGGSRDGGMTTMSNLL 206 GKG+ VI+NGP S++++RV GCK + IKILSD+QNA GSRDGG+ +LL Sbjct: 156 HTGGKGDYVILNGPASSSILERVKGCKNVLSQHADIKILSDDQNAEGSRDGGLKVFQSLL 215 Query: 207 AAQPKIDAVFAINDPTAIGAELAIRQAKRSDIKWISGVDGAPDAERALKDSKSLFAASPA 266 KIDAVFAINDPTAIGA+LA +Q RS+ + + VDGAPD E+ L S+ AS + Sbjct: 216 TRFDKIDAVFAINDPTAIGAQLAAKQLNRSEFIF-TAVDGAPDIEKELSSGSSMIKASAS 274 Query: 267 QDPYGMAAESVAIGYAVMNGRAPQQKVKLLPVKLITRDNVADYQGWVPAK 316 QDPY MA +S+ + ++ G+ P + LL KLIT +N+ DY+GW A+ Sbjct: 275 QDPYVMAGQSLTMAAELLAGKKPAEATVLLDPKLITAENLKDYKGWTAAR 324