BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0038.0039.p         (187 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc2718 [S] COG2353 Uncharacterized conserved protein Rso Ralsto...   198   7e-51
CC3391_2 Non COG                                                       74   1e-13
yceI [S] COG2353 Uncharacterized conserved protein Eco Escherich...    72   7e-13
ZyceI [S] COG2353 Uncharacterized conserved protein EcZ Escheric...    72   7e-13
ECs1434 [S] COG2353 Uncharacterized conserved protein Ecs Escher...    72   7e-13

>RSc2718 [S] COG2353 Uncharacterized conserved protein Rso Ralstonia
           solanacearum
          Length = 189

 Score =  198 bits (503), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 99/184 (53%), Positives = 137/184 (74%), Gaps = 1/184 (0%)

Query: 3   LNRFIKPTLLAL-AAASFALSAQAAPLKVDAAKSNVVATFKQLNVPVDAKFKKFAATIDF 61
           + R  +P  L L AA + +++A +A  +VDAAKS+V AT KQL VP+D KF KF A + +
Sbjct: 2   MKRVARPRALGLIAAGALSIAALSAIAQVDAAKSSVTATGKQLGVPMDIKFGKFDAAVSY 61

Query: 62  DAAKPAEGKANVEIDVTSFDLGEPDYNKEVQKKEWFNAAQFPKASFVSSSIKANGAGKYD 121
           + A  A   A V+IDV+S D+G+  YN E++KK+WF+AA++PKA+FVSS+ K    GK +
Sbjct: 62  NPANLAASTAKVDIDVSSVDVGDKAYNDELKKKDWFDAAKYPKATFVSSAFKPGAGGKVE 121

Query: 122 VAGKLTIKGKTTDVSFPLTVKKEGAAQVFDGVLPIKRLTYNIGEGEWKDTGMVADEVTIK 181
           V GKLTIKG T DV+ P TVK++GA+QVF+G LPIKR  +++G+GEWKDT +VAD+VTIK
Sbjct: 122 VVGKLTIKGVTQDVTAPFTVKQDGASQVFEGALPIKRNAFHVGDGEWKDTSVVADDVTIK 181

Query: 182 FHIV 185
           F +V
Sbjct: 182 FRVV 185


>CC3391_2 Non COG
          Length = 140

 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 70/138 (50%)

Query: 50  AKFKKFAATIDFDAAKPAEGKANVEIDVTSFDLGEPDYNKEVQKKEWFNAAQFPKASFVS 109
            +F+++ A I F        +  V +D+ S + G+   +  +  +++ + A  PKA F +
Sbjct: 1   GRFQRWTAEILFSPEALDRSEVTVGVDLASTETGDAQRDASLTGEDFLDTADHPKAVFTA 60

Query: 110 SSIKANGAGKYDVAGKLTIKGKTTDVSFPLTVKKEGAAQVFDGVLPIKRLTYNIGEGEWK 169
           +  +  G G+Y   G L ++G    +S P ++K +G      GV  + R T+ +G+GEW 
Sbjct: 61  TKFRKTGEGRYVADGTLDLRGVKKPLSLPFSLKIDGDTATASGVTTLDRTTFGVGQGEWA 120

Query: 170 DTGMVADEVTIKFHIVAQ 187
            T  +A +V + F + A+
Sbjct: 121 STDEIAAQVKVSFKLTAK 138


>yceI [S] COG2353 Uncharacterized conserved protein Eco Escherichia coli
           K12
          Length = 191

 Score = 72.0 bits (175), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 73/145 (50%), Gaps = 7/145 (4%)

Query: 7   IKPTLLALAAASFALSAQ---AAPLKVDAAKSNVVATFKQLNVPVD---AKFKKFAATID 60
           +K +LL L  AS   SA    AA  K+D    +    F+  ++        FK F  T  
Sbjct: 1   MKKSLLGLTFASLMFSAGSAVAADYKIDKEGQHAFVNFRIQHLGYSWLYGTFKDFDGTFT 60

Query: 61  FDAAKPAEGKANVEIDVTSFDLGEPDYNKEVQKKEWFNAAQFPKASFVSSSIKANGAGKY 120
           FD   PA  K NV I+ TS D    + +K ++  ++ N A++P+A+F S+S+K +G  + 
Sbjct: 61  FDEKNPAADKVNVTINTTSVDTNHAERDKHLRSADFLNTAKYPQATFTSTSVKKDGD-EL 119

Query: 121 DVAGKLTIKGKTTDVSFPLTVKKEG 145
           D+ G LT+ G T  V+    +  +G
Sbjct: 120 DITGDLTLNGVTKPVTLEAKLIGQG 144


>ZyceI [S] COG2353 Uncharacterized conserved protein EcZ Escherichia coli
           O157:H7 EDL933
          Length = 191

 Score = 72.0 bits (175), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 73/145 (50%), Gaps = 7/145 (4%)

Query: 7   IKPTLLALAAASFALSAQ---AAPLKVDAAKSNVVATFKQLNVPVD---AKFKKFAATID 60
           +K +LL L  AS   SA    AA  K+D    +    F+  ++        FK F  T  
Sbjct: 1   MKKSLLGLTFASLMFSAGSAVAADYKIDKEGQHAFVNFRIQHLGYSWLYGTFKDFDGTFT 60

Query: 61  FDAAKPAEGKANVEIDVTSFDLGEPDYNKEVQKKEWFNAAQFPKASFVSSSIKANGAGKY 120
           FD   PA  K NV I+ TS D    + +K ++  ++ N A++P+A+F S+S+K +G  + 
Sbjct: 61  FDEKNPAADKVNVTINTTSVDTNHAERDKHLRSADFLNTAKYPQATFTSTSVKKDGD-EL 119

Query: 121 DVAGKLTIKGKTTDVSFPLTVKKEG 145
           D+ G LT+ G T  V+    +  +G
Sbjct: 120 DITGDLTLNGVTKPVTLEAKLIGQG 144


>ECs1434 [S] COG2353 Uncharacterized conserved protein Ecs Escherichia coli
           O157:H7
          Length = 191

 Score = 72.0 bits (175), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 73/145 (50%), Gaps = 7/145 (4%)

Query: 7   IKPTLLALAAASFALSAQ---AAPLKVDAAKSNVVATFKQLNVPVD---AKFKKFAATID 60
           +K +LL L  AS   SA    AA  K+D    +    F+  ++        FK F  T  
Sbjct: 1   MKKSLLGLTFASLMFSAGSAVAADYKIDKEGQHAFVNFRIQHLGYSWLYGTFKDFDGTFT 60

Query: 61  FDAAKPAEGKANVEIDVTSFDLGEPDYNKEVQKKEWFNAAQFPKASFVSSSIKANGAGKY 120
           FD   PA  K NV I+ TS D    + +K ++  ++ N A++P+A+F S+S+K +G  + 
Sbjct: 61  FDEKNPAADKVNVTINTTSVDTNHAERDKHLRSADFLNTAKYPQATFTSTSVKKDGD-EL 119

Query: 121 DVAGKLTIKGKTTDVSFPLTVKKEG 145
           D+ G LT+ G T  V+    +  +G
Sbjct: 120 DITGDLTLNGVTKPVTLEAKLIGQG 144