BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0038.0033.p         (215 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc0763 [R] COG1853 Conserved protein/domain typically associate...   196   3e-50
AGpA322 [R] COG1853 Conserved protein/domain typically associate...   117   3e-26
SMa0793 [R] COG1853 Conserved protein/domain typically associate...   113   3e-25
RC0191 Non COG                                                        112   6e-25
RSc1836 [R] COG1853 Conserved protein/domain typically associate...   111   1e-24

>RSc0763 [R] COG1853 Conserved protein/domain typically associated with
           flavoprotein oxygenases, DIM6/NTAB family Rso Ralstonia
           solanacearum
          Length = 191

 Score =  196 bits (498), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 103/163 (63%), Positives = 120/163 (73%), Gaps = 6/163 (3%)

Query: 31  RADARQFDAAHFRQALSQFATGVTVITTRLADGT----LLGLTASSFNSVSLDPPLVLWS 86
           RA    FDAAHFR+ALSQFATGVTV+TTR          +G+TASSFNSVSL+PPLVLWS
Sbjct: 18  RATPPDFDAAHFRRALSQFATGVTVVTTRSGGAPDQPPFVGVTASSFNSVSLEPPLVLWS 77

Query: 87  LGSKANSMPVFSGNSHYVINILSADQAHLAQQFASKMENRFEGVAYTLSRTGQPILEGAS 146
           LG++ANS P+F   SHYVIN+LSA Q  L ++FA+   +RF  V Y LS TG PIL  + 
Sbjct: 78  LGTQANSFPLFHRGSHYVINVLSASQLDLCKRFATLKGDRFANVDYRLSPTGLPILAQSL 137

Query: 147 AWFECHNRSQYPEGDHVIFVGEVEHCEV-DPKAA-LIFHNGRF 187
           AWFECHNRS+Y EGDHVIFVGEVE C V D + A L+FH G F
Sbjct: 138 AWFECHNRSRYDEGDHVIFVGEVERCGVLDARGAPLVFHRGAF 180


>AGpA322 [R] COG1853 Conserved protein/domain typically associated with
           flavoprotein oxygenases, DIM6/NTAB family Atu
           Agrobacterium tumefaciens strain C58 (Cereon)
          Length = 323

 Score =  117 bits (292), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 62/151 (41%), Positives = 84/151 (55%)

Query: 37  FDAAHFRQALSQFATGVTVITTRLADGTLLGLTASSFNSVSLDPPLVLWSLGSKANSMPV 96
            D    R+A   F TGVT++TT  ADG   G+TA+SF SVSLDPPL+L  +G  A S   
Sbjct: 8   IDPIALRKAFGTFVTGVTIVTTYDADGNPRGMTANSFTSVSLDPPLLLICVGKSAASYEA 67

Query: 97  FSGNSHYVINILSADQAHLAQQFASKMENRFEGVAYTLSRTGQPILEGASAWFECHNRSQ 156
           F     + +N L   Q  ++  FASK  ++F  V +    TG PIL  + +WF+C   ++
Sbjct: 68  FCQTESFAVNFLHEGQVDVSGIFASKTADKFGSVRHHRVHTGAPILADSLSWFDCTVFNR 127

Query: 157 YPEGDHVIFVGEVEHCEVDPKAALIFHNGRF 187
              GDHVI +GEV      P+A L F  GR+
Sbjct: 128 VEAGDHVILIGEVRAFGTSPQAPLGFCRGRY 158


>SMa0793 [R] COG1853 Conserved protein/domain typically associated with
           flavoprotein oxygenases, DIM6/NTAB family Sme
           Sinorhizobium meliloti
          Length = 320

 Score =  113 bits (282), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 61/154 (39%), Positives = 80/154 (51%)

Query: 34  ARQFDAAHFRQALSQFATGVTVITTRLADGTLLGLTASSFNSVSLDPPLVLWSLGSKANS 93
           A  FD    R A   FATGVTV+T   A G  +G TA+SF SVSLDPPL+L  L   + +
Sbjct: 12  AEVFDPRALRDAFGAFATGVTVVTASDAAGKPIGFTANSFTSVSLDPPLLLVCLAKSSRN 71

Query: 94  MPVFSGNSHYVINILSADQAHLAQQFASKMENRFEGVAYTLSRTGQPILEGASAWFECHN 153
               +    + IN+LS  Q  ++  FA  +E+RF  V + L R G PI    +AWFEC  
Sbjct: 72  YESMTSAGRFAINVLSETQKDVSNTFARPVEDRFAAVDWRLGRDGCPIFSDVAAWFECSM 131

Query: 154 RSQYPEGDHVIFVGEVEHCEVDPKAALIFHNGRF 187
           +     GDHVI +G V   E      L +  G +
Sbjct: 132 QDIIEAGDHVIIIGRVTAFENSGLNGLGYARGGY 165


>RC0191 Non COG
          Length = 159

 Score =  112 bits (280), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 58/147 (39%), Positives = 88/147 (59%), Gaps = 4/147 (2%)

Query: 40  AHFRQALSQFATGVTVITTRLADGTLLGLTASSFNSVSLDPPLVLWSLGSKANSMPVFSG 99
           + F+ A+S+F  GVT+ITT   +  L G TASS  SVSL PPL+L+ L   + S+  F  
Sbjct: 8   SQFKDAMSRFPQGVTIITTN-CNNELFGFTASSLTSVSLKPPLILFCLNKNSFSINSFQK 66

Query: 100 NSHYVINILSADQAHLAQQFASKMENRFEGVAYTL-SRTGQPILEGASAWFECHNRSQYP 158
           +  + I+IL+ +Q  +++ FA    N+F  + Y L ++T  P++ GA+   EC+  + Y 
Sbjct: 67  SDKFAISILAENQIDISKHFAKSQSNKFTKIDYELGNKTDCPLINGATYHIECNKYASYD 126

Query: 159 EGDHVIFVGEVEHCEV--DPKAALIFH 183
            GDHVIF+GEV +  +  D K  L FH
Sbjct: 127 AGDHVIFIGEVINTAIKNDLKPLLYFH 153


>RSc1836 [R] COG1853 Conserved protein/domain typically associated with
           flavoprotein oxygenases, DIM6/NTAB family Rso Ralstonia
           solanacearum
          Length = 183

 Score =  111 bits (278), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 59/154 (38%), Positives = 86/154 (55%), Gaps = 1/154 (0%)

Query: 42  FRQALSQFATGVTVITTRLADGTLLGLTASSFNSVSLDPPLVLWSLGSKANSMPVFSGNS 101
            R     + TGV ++TTR  DG  +GLT +SF ++SL PPLVLWSL  ++ ++  F   S
Sbjct: 30  LRNLFGSYPTGVAIVTTRTPDGRAVGLTINSFATLSLAPPLVLWSLVDRSPNLDAFRACS 89

Query: 102 HYVINILSADQAHLAQQFAS-KMENRFEGVAYTLSRTGQPILEGASAWFECHNRSQYPEG 160
           H+ INIL+     LA++FAS  + ++F+GVA   +  G P ++GA     C +      G
Sbjct: 90  HFAINILANGHEALAKRFASAAVPDKFDGVALQETPEGVPAIDGAVTTLVCAHDHCRHVG 149

Query: 161 DHVIFVGEVEHCEVDPKAALIFHNGRFIKTEAVA 194
           DH++ VG V      P   L+FH GRF    A +
Sbjct: 150 DHLLLVGRVVRTANQPGTPLVFHAGRFTSLHAAS 183